HELP     Sign In
Search

Relevance to Autism

TADA analysis of an integrated cohort of over 40,000 ASD cases across unpublished and published global cohort in Tan et al., 2026 identified SLC4A8 as an ASD risk gene with a false discovery rare of <0.05; among the ASD-associated variants used in this analysis were a de novo loss-of-function variant identified in a SPARK proband and four de novo missense variants (three from the SPARK cohort, one from a Chinese ASD cohort originally reported in Wang et al., 2023; three of the four missense variants had MPC scores greater than 2). Two additional ASD-associated de novo missense variants in the SLC4A8 gene that were not included in the Tan et al., 2026 analysis were reported in a SPARK proband and a GALA proband in Natividad Avila et al., 2026.

Molecular Function

The protein encoded by this gene is a membrane protein that functions to transport sodium and bicarbonate ions across the cell membrane. The encoded protein is important for pH regulation in neurons. The activity of this protein can be inhibited by 4,4'-Di-isothiocyanatostilbene-2,2'-disulfonic acid (DIDS). Sinning et al., 2011 demonstrated that steady-state pH and acid extrusion were diminished in cultured hippocampal neurons of mice with a targeted disruption of Slc4a8.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Genomic landscape of rare variants in a Chinese autism cohort and discovery of novel risk genes.
ASD
Support
Deleterious coding variation associated with autism is shared across ancestries.
ASD
Support
Synaptic glutamate release is modulated by the Na+ -driven Cl-/HCO(3)(-) exchanger Slc4a8.
Highly Cited
Cryo-EM structure of the sodium-driven chloride/bicarbonate exchanger NDCBE.
Highly Cited
Expression and localization of Na-driven Cl-HCO(3)(-) exchanger (SLC4A8) in rodent CNS.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1559R001 
 missense_variant 
 c.454C>T 
 p.Arg152Cys 
 De novo 
  
 Simplex 
 GEN1559R002 
 missense_variant 
 c.157C>T 
 p.Arg53Trp 
 De novo 
  
 Multiplex 
 GEN1559R003 
 missense_variant 
 c.104T>A 
 p.Ile35Asn 
 De novo 
  
 Simplex 
 GEN1559R004 
 synonymous_variant 
 c.2052C>T 
 p.Cys684= 
 De novo 
  
 Multiplex 
 GEN1559R005 
 synonymous_variant 
 c.303C>T 
 p.Phe101= 
 De novo 
  
 Simplex 
 GEN1559R006 
 frameshift_variant 
 c.2193_2195delinsC 
 p.Phe732CysfsTer13 
 De novo 
  
 Simplex 
 GEN1559R007 
 missense_variant 
 c.1771C>T 
 p.Arg591Cys 
 De novo 
  
 Unknown 
 GEN1559R008 
 missense_variant 
 c.2446A>C 
 p.Lys816Gln 
 De novo 
  
 Unknown 
 GEN1559R009 
 missense_variant 
 c.937C>T 
 p.Arg313Cys 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
12
Duplication
 1
 
12
Deletion-Duplication
 16
 

No Animal Model Data Available

No PIN Data Available
HELP
Copyright © 2017 MindSpec, Inc.