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Relevance to Autism

A functional polymorphism statistically enriched in Japanese ASD cases compared to ethnically-matched controls, as well as two novel case-specific missense variants in Japanese male ASD probands, were identified in the SLC27A4 gene (Maekawa et al., 2015).

Molecular Function

This gene encodes a member of a family of fatty acid transport proteins, which are involved in translocation of long-chain fatty acids cross the plasma membrane. Clinical studies suggest this gene as a candidate gene for the insulin resistance syndrome, and mutations in this gene have been associated with ichthyosis prematurity syndrome (OMIM 608649).

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Investigation of the fatty acid transporter-encoding genes SLC27A3 and SLC27A4 in autism.
ASD
Support
SLC gene mutations and pediatric neurological disorders: diverse clinical phenotypes in a Saudi Arabian population
DD, epilepsy/seizures
Support
Integrating de novo and inherited variants in 42
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN784R001 
 missense_variant 
 c.250G>A 
 p.Val84Ile 
 Unknown 
  
 Unknown 
 GEN784R002 
 missense_variant 
 c.272C>T 
 p.Thr91Met 
 Unknown 
  
 Unknown 
 GEN784R003a 
 missense_variant 
 c.848A>G 
 p.Tyr283Cys 
 Familial 
 Both parents 
  
 GEN784R004 
 missense_variant 
 c.778C>T 
 p.His260Tyr 
 De novo 
  
  

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN784C001 
 missense_variant 
 rs2240953 
 c.625G>A 
 p.Gly209Ser 
 267 Japanese ASD cases, 1140 Japanese controls 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
9
Duplication
 1
 
9
Deletion
 1
 
9
Duplication
 1
 
9
Deletion
 4
 
9
Duplication
 1
 
9
Deletion-Duplication
 16
 

No Animal Model Data Available

 

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