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Relevance to Autism

De novo variants in the SH3RF1 gene, including a splice-site variant and an in-frame insertion variant, have been identified in ASD probands (Yuen et al., 2017; Turner et al., 2017; Satterstrom et al., 2020). Yao et al., 2022 found that the protein encoded by the SH3RF1 gene (called POSH in this report) interacted with PSD-95 (the protein encoded by the ASD candidate gene DLG4) and the proteins encoded by the SHANK2 and SHANK3 genes, and that these interactions were required for dendritic spine development; furthermore, SH3RF1 conditional knockout mice exhibited autism-like behaviors, deficits in learning and memory, and abnormal evoked NMDAR EPSCs and NMDAR-dependent plasticity.

Molecular Function

This gene encodes a protein containing an N-terminus RING-finger, four SH3 domains, and a region implicated in binding of the Rho GTPase Rac. Via the RING-finger, the encoded protein has been shown to function as an ubiquitin-protein ligase involved in protein sorting at the trans-Golgi network. The encoded protein may also act as a scaffold for the c-Jun N-terminal kinase signaling pathway, facilitating the formation of a functional signaling module.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Genomic Patterns of De Novo Mutation in Simplex Autism
ASD
Support
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD
Recent Recommendation
POSH regulates assembly of the NMDAR/PSD-95/Shank complex and synaptic function
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1315R001 
 splice_site_variant 
 c.394-2_394-1insTCTGCAGAGCTCCCAGGGCGGACAGCAGCCTCGGGTGCAATCCTGGAGCCCCCCAGTGAG 
  
 De novo 
  
 Simplex 
 GEN1315R002 
 inframe_insertion 
 c.2140-1_2140insGCTGAGCCCAGTGGCCGGATAGTGACCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATCAGCTTGTGGGAACAGT 
 p.Ala676_Lys713dup 
 De novo 
  
  
 GEN1315R003 
 intron_variant 
 c.394-16087G>A 
  
 De novo 
  
 Multiplex 
 GEN1315R004 
 intron_variant 
 c.1180-1778A>G 
  
 De novo 
  
 Simplex 
 GEN1315R005 
 intron_variant 
 c.766-7947G>A 
  
 De novo 
  
 Multiplex 
 GEN1315R006 
 intron_variant 
 c.393+37822_393+37826del 
  
 De novo 
  
 Multiplex 
 GEN1315R007 
 intron_variant 
 c.1068+2669G>A 
  
 De novo 
  
 Simplex 
 GEN1315R008 
 intron_variant 
 c.2139+3254_2139+3256del 
  
 De novo 
  
 Multiplex 
 GEN1315R009 
 intron_variant 
 c.393+48163del 
  
 De novo 
  
 Multiplex 
 GEN1315R010 
 intron_variant 
 c.394-11234_394-11233insTCAAGATA 
  
 De novo 
  
 Simplex 
 GEN1315R011 
 intron_variant 
 c.393+49188del 
  
 De novo 
  
 Multiplex 
 GEN1315R012 
 intron_variant 
 c.394-20476A>G 
  
 De novo 
  
 Multiplex 
 GEN1315R013 
 intron_variant 
 c.394-23628G>A 
  
 De novo 
  
 Multiplex 
 GEN1315R014 
 intron_variant 
 c.766-5995T>C 
  
 De novo 
  
 Multiplex 
 GEN1315R015 
 intron_variant 
 c.393+26561G>A 
  
 De novo 
  
 Multiplex 
 GEN1315R016 
 intron_variant 
 c.393+46490A>G 
  
 De novo 
  
 Simplex 
 GEN1315R017 
 intron_variant 
 c.394-7794G>A 
  
 De novo 
  
 Multiplex 
 GEN1315R018 
 intron_variant 
 c.394-54355G>A 
  
 De novo 
  
 Multiplex 
 GEN1315R019 
 intron_variant 
 c.393+13890C>T 
  
 De novo 
  
 Simplex 
 GEN1315R020 
 intron_variant 
 c.766-5491G>C 
  
 De novo 
  
 Simplex 
 GEN1315R021 
 synonymous_variant 
 c.1248C>T 
 p.Gly416%3D 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
4
Duplication
 1
 
4
Duplication
 1
 
4
Duplication
 1
 
4
Duplication
 1
 
4
Duplication
 2
 
4
Deletion
 1
 
4
Deletion
 1
 
4
Deletion
 1
 
4
Duplication
 3
 
4
Deletion
 1
 
4
Deletion-Duplication
 1
 

No Animal Model Data Available

 

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