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Relevance to Autism

A total of nine ASD-specific variants, three of which were non-synonymous, in the SETDB2 gene were identified in cases but not controls (Cukier et al., 2012).

Molecular Function

Histone methyltransferase involved in left-right axis specification in early development and mitosis. Plays a role in chromosome condensation and segregation during mitosis.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
The expanding role of MBD genes in autism: identification of a MECP2 duplication and novel alterations in MBD5, MBD6, and SETDB1.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Range of genetic mutations associated with severe non-syndromic sporadic intellectual disability: an exome sequencing study.
ID
Epilepsy, ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN461R001 
 missense_variant 
 c.1274T>C 
 p.Ile425Thr 
 Familial 
 Maternal 
 Simplex 
 GEN461R002 
 missense_variant 
 c.1424C>T 
 p.Thr475Met 
 Familial 
 Maternal 
 Simplex 
 GEN461R003 
 missense_variant 
 c.1607C>G 
 p.Ala536Gly 
 Familial 
 Paternal 
 Simplex 
 GEN461R004 
 intron_variant 
 c.209-8C>A 
  
 Unknown 
 Unknown 
 Unknown 
 GEN461R005 
 intron_variant 
 c.869+49C>T 
  
 Unknown 
 Unknown 
 Unknown 
 GEN461R006 
 intron_variant 
 c.986+35A>G 
  
 Unknown 
 Unknown 
 Unknown 
 GEN461R007 
 intron_variant 
 c.1156+42C>T 
  
 Unknown 
 Unknown 
 Unknown 
 GEN461R008 
 intron_variant 
 c.143-52G>C 
  
 Unknown 
 Unknown 
 Unknown 
 GEN461R009 
 intron_variant 
 c.869+86A>G 
  
 Unknown 
 Unknown 
 Unknown 
 GEN461R010 
 frameshift_variant 
 c.1444dup 
 p.Ser482PhefsTer26 
 De novo 
  
 Simplex 
 GEN461R011 
 missense_variant 
 c.829T>C 
 p.Phe277Leu 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
13
Deletion
 1
 
13
Duplication
 1
 
13
N/A
 1
 
13
Deletion
 1
 
13
Duplication
 2
 
13
Deletion
 1
 
13
Duplication
 1
 
13
Duplication
 1
 
13
Duplication
 1
 
13
Deletion
 1
 
13
Deletion
 1
 
13
Duplication
 1
 
13
Deletion
 1
 
13
Deletion-Duplication
 13
 
13
Deletion
 1
 

No Animal Model Data Available

 

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