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Relevance to Autism

Two de novo missense variants in the SCN4A gene were identified in simplex ASD probands, with no de novo events in this gene observed in 1,786 unaffected siblings from the Simons Simplex Collection (P=0.17) (Iossifov et al., 2014; Krumm et al., 2015).

Molecular Function

This protein mediates the voltage-dependent sodium ion permeability of excitable membranes and may be present in both denervated and innervated skeletal muscle. Mutations in this gene have been linked to several myotonia and periodic paralysis disorders.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
The combination of whole-exome sequencing and copy number variation sequencing enables the diagnosis of rare neurological disorders.
Muscular abnormalities
Support
Rates, distribution and implications of postzygotic mosaic mutations in autism spectrum disorder.
ASD
Support
Excess of rare, inherited truncating mutations in autism.
ASD
Support
ASD
ID
Support
Integrating de novo and inherited variants in 42
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN739R001 
 missense_variant 
 c.2587G>A 
 p.Gly863Arg 
 De novo 
  
 Simplex 
 GEN739R002 
 missense_variant 
 c.568C>T 
 p.Arg190Trp 
 De novo 
  
 Simplex 
 GEN739R003 
 missense_variant 
 c.2370T>A 
 p.Asn790Lys 
 De novo 
  
 Simplex 
 GEN739R004 
 missense_variant 
 c.4343G>A 
 p.Arg1448His 
 De novo 
  
  
 GEN739R005 
 synonymous_variant 
 c.4704C>T 
 p.Cys1568%3D 
 De novo 
  
  
 GEN739R006 
 missense_variant 
 c.3164T>C 
 p.Ile1055Thr 
 De novo 
  
  
 GEN739R007 
 missense_variant 
 c.53G>A 
 p.Arg18His 
 Familial 
 Paternal 
 Simplex 
  et al.  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
17
Duplication
 1
 
17
Duplication
 1
 
17
Duplication
 1
 
17
Duplication
 1
 
17
Duplication
 1
 
17
Deletion-Duplication
 11
 
17
Duplication
 1
 

No Animal Model Data Available

No PIN Data Available
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