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Relevance to Autism

The non-coding RNA transcript RPS10P2-AS1 is located in an intron of the MACROD2 gene and resides 9 kb from rs4141463, a SNP for which the C allele has been shown to associate with ASD in a genome-wide association study (Anney et al., 2010) and in a German case-control cohort (Curran et al., 2011), as well as with autistic-like traits in the general population (Jones et al., 2014). Bilinovich et al., 2019 demonstrated that expression of RPS10P2-AS1 was increased in postmortem temporal cortex from individuals with ASD (P = 0.02) and that the rs4141463 C/C genotype was associated with a significantly higher expression of RPS10P2-AS1 than the T/T genotype; conversely, there was no significant change in MACROD2 expression in postmortem brain tissue in ASD individuals, and there was no correlation between rs4141463 gentoype and MACROD2 expression.

Molecular Function

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References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
A genome-wide scan for common alleles affecting risk for autism.
ASD
Positive association
MACROD2 gene associated with autistic-like traits in a general population sample.
ALTs
Positive association
No association between a common single nucleotide polymorphism, rs4141463, in the MACROD2 gene and autism spectrum disorder.
ASD
Recent Recommendation
The Long Noncoding RNA RPS10P2-AS1 Is Implicated in Autism Spectrum Disorder Risk and Modulates Gene Expression in Human Neuronal Progenitor Cells.
ASD

Rare

No Rare Variants Available

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN1131C001 
 upstream_gene_variant 
 rs4141463 
 T>C 
  
 AGP, AGRE, SAGE 
 Discovery 
 GEN1131C002 
 upstream_gene_variant 
 rs4141463 
 T>C 
  
 German 
 Replication 
 GEN1131C003 
 upstream_gene_variant 
 rs4141463 
 T>C 
  
 965 individuals from the Western Australian Pregnancy Cohort (Raine) Study. 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model

No Animal Model Data Available

No PIN Data Available
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