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Relevance to Autism

Biallelic variants in the RIMS2 gene were identified in seven individuals from four unrelated families presenting with syndromic congenital cone-rod synaptic disorder; five of these individuals presented with autistic behavior (Mechaussier et al., 2020). An intronic polymorphism in RIMS2 (rs2080610) had previously been shown to associate with Asperger syndrome in discovery and validation cohorts in Salyakina et al., 2010, while rare CNVs affecting RIMS2 had been identified in two Chinese ASD probands in Fan et al., 2018.

Molecular Function

The protein encoded by this gene is a presynaptic protein that interacts with RAB3, a protein important for normal neurotransmitter release. The encoded protein can also bind several other synaptic proteins, including UNC-13 homolog B, ELKS/Rab6-interacting/CAST family member 1, and synaptotagmin 1. This protein is involved in synaptic membrane exocytosis.

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References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Loss of Function of RIMS2 Causes a Syndromic Congenital Cone-Rod Synaptic Disease with Neurodevelopmental and Pancreatic Involvement
Congenital cone-rod synaptic disorder
Autistic behavior, stereotypy
Positive Association
Variants in several genomic regions associated with asperger disorder
ASD
Support
Rare Copy Number Variations in a Chinese Cohort of Autism Spectrum Disorder
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1180R001a 
 stop_gained 
 c.3126G>A 
 p.Trp1042Ter 
 Familial 
 Both parents 
  
 GEN1180R002a 
 splice_site_variant 
 c.3656G>A 
 p.Gly1219Asp 
 Familial 
 Paternal 
 Simplex 
 GEN1180R002b 
 stop_gained 
 c.2884C>T 
 p.Gln962Ter 
 Familial 
 Maternal 
 Simplex 
 GEN1180R003a 
 stop_gained 
 c.3508C>T 
 p.Arg1170Ter 
 Familial 
 Both parents 
 Multiplex 
 GEN1180R004a 
 stop_gained 
 c.1595C>G 
 p.Ser532Ter 
 Familial 
 Both parents 
 Simplex 
 GEN1180R005 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
 GEN1180R006 
 copy_number_gain 
  
  
 Unknown 
  
 Unknown 
 GEN1180R007 
 missense_variant 
 c.328G>C 
 p.Glu110Gln 
 Unknown 
  
  
 GEN1180R008 
 missense_variant 
 c.503G>A 
 p.Arg168Gln 
 De novo 
  
 Simplex 
 GEN1180R009 
 stop_gained 
 c.253C>T 
 p.Leu85Phe 
 De novo 
  
  
 GEN1180R010 
 stop_gained 
 c.253C>T 
 p.Leu85Phe 
 De novo 
  
 Simplex 
 GEN1180R011 
 missense_variant 
 c.300T>A 
 p.Phe100Leu 
 De novo 
  
  
 GEN1180R012 
 missense_variant 
 c.833C>T 
 p.Ser278Phe 
 Familial 
  
 Multiplex 

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN1180C001 
 intron_variant 
 rs2080610 
 c.176+40118A>C 
  
 Discovery cohort: 392 individuals from 124 ASD families (University of South Carolina and the John P. Hussman Institute for Human Genomics (HIHG)). Validation cohort: 468 individuals from 110 ASD families (AGRE) 
 Discovery and Replication (meta-analysis) 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 4
 
8
Deletion-Duplication
 18
 

No Animal Model Data Available

 

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