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Relevance to Autism

Genetic and phenotypic characterization of individuals with potentially deleterious variants in three brain-expressed members of the RFX family (RFX3, RFX4, or RFX7) in Harris et al., 2021 identified six individuals from four families with variants in the RFX4 gene; all six individuals presented with global developmental delay/intellectual disability, and five additionally presented with autism spectrum disorder. A de novo missense variant in the RFX4 gene had previously been identified in an ASD proband from the Autism Sequencing Consortium (De Rubeis et al., 2014).

Molecular Function

This gene is a member of the regulatory factor X gene family, which encodes transcription factors that contain a highly-conserved winged helix DNA binding domain. The protein encoded by this gene is structurally related to regulatory factors X1, X2, X3, and X5. It has been shown to interact with itself as well as with regulatory factors X2 and X3, but it does not interact with regulatory factor X1. The transcription factor encoded by the RFX4 gene plays a role in early brain development.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Disruption of RFX family transcription factors causes autism, attention-deficit/hyperactivity disorder, intellectual disability, and dysregulated behavior
ASD, DD, ID
Epilepsy/seizures
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1235R001 
 missense_variant 
 c.1508G>A 
 p.Arg503Gln 
 De novo 
  
 Simplex 
 GEN1235R002 
 inframe_deletion 
 c.1915_1929del 
 p.Tyr639_Ser643del 
 De novo 
  
 Simplex 
 GEN1235R003 
 missense_variant 
 c.235C>A 
 p.Arg79Ser 
 De novo 
  
 Simplex 
 GEN1235R004a 
 missense_variant 
 c.740C>T 
 p.Thr247Met 
 Familial 
 Both parents 
 Multiplex 
 GEN1235R005 
 missense_variant 
 c.1084A>G 
 p.Thr362Ala 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
12
Duplication
 1
 
12
Deletion
 1
 
12
Deletion-Duplication
 9
 
12
Deletion
 1
 
12
Deletion
 1
 

No Animal Model Data Available

No PIN Data Available
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