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Relevance to Autism

This gene was identified by TADA (transmission and de novo association) analysis of a combined dataset from the Simons Simplex Collection (SSC) and the Autism Sequencing Consortium (ASC) as a gene strongly enriched for variants likely to affect ASD risk with a false discovery rate (FDR) of <0.1 (Sanders et al., 2015); among the variants observed in this gene were two de novo loss-of-function (LoF) variants.

Molecular Function

The protein encoded by this gene may function as a nuclear transport receptor.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Insights into Autism Spectrum Disorder Genomic Architecture and Biology from 71 Risk Loci.
ASD
Support
Both rare and common genetic variants contribute to autism in the Faroe Islands.
ASD
Support
De Novo Sequence and Copy Number Variants Are Strongly Associated with Tourette Disorder and Implicate Cell Polarity in Pathogenesis.
TS
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Analysis of recent shared ancestry in a familial cohort identifies coding and noncoding autism spectrum disorder variants
ASD
DD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN760R001 
 frameshift_variant 
 2488+TC(delTC) 
 830-! 
 De novo 
  
  
 GEN760R002 
 stop_gained 
 c.3094C>T 
 p.Gln1032Ter 
 De novo 
  
  
 GEN760R003 
 missense_variant 
 c.1769C>T 
 p.Thr590Met 
 De novo 
  
 Simplex 
 GEN760R004 
 missense_variant 
 c.311T>A 
 p.Ile104Asn 
 De novo 
  
 Simplex 
 GEN760R005 
 frameshift_variant 
 c.521_522del 
 p.Arg174LysfsTer8 
 Familial 
 Paternal 
 Simplex 
 GEN760R006 
 splice_site_variant 
 c.1784+1G>A 
  
 Familial 
 Paternal 
 Multiplex 
 GEN760R007a 
 missense_variant 
 c.3206T>G 
 p.Val1069Gly 
 Familial 
 Paternal 
 Simplex 
 GEN760R007b 
 missense_variant 
 c.728G>A 
 p.Cys243Tyr 
 Familial 
 Maternal 
 Simplex 
 GEN760R008 
 missense_variant 
 c.2002T>G 
 p.Tyr668Asp 
 De novo 
  
  
 GEN760R009 
 synonymous_variant 
 c.3021G>A 
 p.Gly1007%3D 
 De novo 
  
 Simplex 
 GEN760R010 
 stop_gained 
 c.631C>T 
 p.Gln211Ter 
 Familial 
 Paternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
5
Duplication
 1
 
5
Duplication
 1
 
5
Deletion
 1
 
5
Duplication
 1
 
5
Deletion
 1
 
5
Deletion-Duplication
 8
 
5
Duplication
 1
 

No Animal Model Data Available

 

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