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Relevance to Autism

Three de novo loss-of-function (LoF) variants and two de novo missense variants in the PRR14L gene have been identified in ASD probands from the MSSNG cohort, the Autism Sequencing Consortium, and the SPARK cohort (Yuen et al., 2017; Satterstrom et al., 2020; Zhou et al., 2022). Transmission and de novo association (TADA) analysis of whole-exome and whole-genome sequencing data from the Autism Sequencing Consortium, the Simons Simplex Collection, the MSSNG cohort, and the SPARK cohort in Trost et al., 2022 identified PRR14L as an ASD-associated gene with a false discovery rate (FDR) < 0.1.

Molecular Function

Although the molecular function of the protein encoded by this gene is thus far unknown, Chase et al., 2019 reported an association of chromosome 22 acquired uniparental disomy (aUPD) with mutations that delete the C-terminus of PRR14L in patients with chronic myelomonocytic leukemia (CMML), related myeloid neoplasms and age-related clonal hematopoiesis (ARCH); RNA-Seq and cellular localization studies in this report suggested a role for PRR14L in cell division.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD
Support
PRR14L mutations are associated with chromosome 22 acquired uniparental disomy, age-related clonal hematopoiesis and myeloid neoplasia
Chromosome 22 aUPD
Chronic myelomonocytic leukemia, related myeloid n
Support
Integrating de novo and inherited variants in 42
ASD
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Recent Recommendation
Genomic architecture of autism from comprehensive whole-genome sequence annotation
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1378R001 
 stop_gained 
 c.4920T>A 
 p.Cys1640Ter 
 De novo 
  
 Simplex 
 GEN1378R002 
 frameshift_variant 
 c.2461dup 
 p.Ile821AsnfsTer5 
 De novo 
  
  
 GEN1378R003 
 stop_gained 
 c.1342C>T 
 p.Gln448Ter 
 De novo 
  
 Multiplex 
 GEN1378R004 
 missense_variant 
 c.4231G>A 
 p.Ala1411Thr 
 De novo 
  
 Multiplex 
 GEN1378R005 
 missense_variant 
 c.980A>T 
 p.His327Leu 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
22
Duplication
 1
 
22
Duplication
 2
 
22
Duplication
 1
 
22
Deletion-Duplication
 3
 
22
Duplication
 2
 
22
Deletion-Duplication
 7
 

No Animal Model Data Available

 

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