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Relevance to Autism

A de novo translocation disrupting the PRR12 gene was identified in a female patient presenting with intellectual disability, seizures, and behavioral problems in Crdova-Fletes et al., 2015. Three de novo potentially loss-of-function (LoF) variants in the PRR12 gene were identified in patients presenting with intellectual disability, iris abnormalities, and dysmorphic features in Leduc et al., 2018; two of these patients were also diagnosed with ASD by formal testing.

Molecular Function

This gene encodes a proline-rich protein that contains two A-T hook DNA binding domains. Enriched expression of this gene in embryonic mouse brain suggests that this gene may play a role in nervous system development.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
De novo apparent loss-of-function mutations in PRR12 in three patients with intellectual disability and iris abnormalities.
ID
ASD, ADHD
Support
Dominant variants in PRR12 result in unilateral or bilateral complex microphthalmia
Neuroocular syndrome
DD, ID, learning difficulties
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
A de novo t(10;19)(q22.3;q13.33) leads to ZMIZ1/PRR12 reciprocal fusion transcripts in a girl with intellectual disability and neuropsychiatric alt...
ID, epilepsy/seizures
Behavioral abnormalities
Support
Integrating de novo and inherited variants in 42
ASD
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD
Support
Haploinsufficiency of PRR12 causes a spectrum of neurodevelopmental, eye, and multisystem abnormalities
Neuroocular syndrome, DD
ASD or autistic features, ID, epilepsy/seizures

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1008R001 
 translocation 
  
  
 De novo 
  
  
 GEN1008R002 
 stop_gained 
 c.1918G>T 
 p.Glu640Ter 
 De novo 
  
  
 GEN1008R003 
 frameshift_variant 
 c.4691_4694del 
 p.Glu1564AlafsTer83 
 De novo 
  
  
 GEN1008R004 
 frameshift_variant 
 c.425_431dup 
 p.Ser146ValfsTer37 
 De novo 
  
  
 GEN1008R005 
 stop_gained 
 c.4174C>T 
 p.Arg1392Ter 
 De novo 
  
 Simplex 
 GEN1008R006 
 frameshift_variant 
 c.3273del 
 p.Lys1092ArgfsTer131 
 De novo 
  
 Simplex 
 GEN1008R007 
 translocation 
  
  
 De novo 
  
 Simplex 
 GEN1008R008 
 splice_site_variant 
 c.5624-2A>G 
  
 Familial 
 Maternal 
 Simplex 
 GEN1008R009 
 frameshift_variant 
 c.2045del 
 p.Gly682AspfsTer44 
 De novo 
  
 Simplex 
 GEN1008R010 
 frameshift_variant 
 c.677dup 
 p.Tyr227LeufsTer41 
 De novo 
  
 Simplex 
 GEN1008R011 
 frameshift_variant 
 c.2353_2360del 
 p.Ala785ProfsTer2 
 Unknown 
  
 Simplex 
 GEN1008R012 
 frameshift_variant 
 c.334dup 
 p.Gln112ProfsTer69 
 De novo 
  
  
 GEN1008R013 
 stop_gained 
 c.790C>T 
 p.Gln264Ter 
 De novo 
  
  
 GEN1008R014 
 stop_gained 
 c.1232C>A 
 p.Ser411Ter 
 Unknown 
 Not maternal 
 Multiplex 
 GEN1008R015 
 stop_gained 
 c.1521T>G 
 p.Tyr507Ter 
 De novo 
  
 Multiplex (monozygotic twins) 
 GEN1008R016 
 frameshift_variant 
 c.2236_2237del 
 p.Val746CysfsTer43 
 De novo 
  
 Simplex 
 GEN1008R017 
 frameshift_variant 
 c.2398dup 
 p.Gln800ProfsTer26 
 De novo 
  
 Simplex 
 GEN1008R018 
 frameshift_variant 
 c.2732_2744del 
 p.Gly911AlafsTer115 
 De novo 
  
 Simplex 
 GEN1008R019 
 stop_gained 
 c.2755C>T 
 p.Gln919Ter 
 De novo 
  
 Simplex 
 GEN1008R020 
 frameshift_variant 
 c.2824del 
 p.Glu942ArgfsTer88 
 De novo 
  
 Simplex 
 GEN1008R021 
 frameshift_variant 
 c.3009_3028dup 
 p.Leu1010ProfsTer27 
 De novo 
  
 Simplex 
 GEN1008R022 
 frameshift_variant 
 c.3224del 
 p.Thr1075AsnfsTer148 
 Unknown 
  
 Multiplex 
 GEN1008R023 
 frameshift_variant 
 c.3273delC 
 p.Lys1092ArgfsTer131 
 De novo 
  
 Simplex 
 GEN1008R024 
 frameshift_variant 
 c.3273del 
 p.Lys1092ArgfsTer131 
 De novo 
  
  
 GEN1008R025 
 missense_variant 
 c.3505C>T 
 p.Arg1169Trp 
 De novo 
  
  
 GEN1008R026 
 stop_gained 
 c.3958C>T 
 p.Arg1320Ter 
 De novo 
  
 Simplex 
 GEN1008R027 
 frameshift_variant 
 c.4674_4676delinsGC 
 p.Cys1558TrpfsTer90 
 De novo 
  
 Simplex 
 GEN1008R028 
 frameshift_variant 
 c.4768dup 
 p.Leu1590ProfsTer10 
 De novo 
  
  
 GEN1008R029 
 splice_site_variant 
 c.4891-2A>G 
  
 De novo 
  
  
 GEN1008R030 
 missense_variant 
 c.5909T>C 
 p.Leu1970Pro 
 De novo 
  
 Simplex 
 GEN1008R031 
 copy_number_loss 
  
  
 De novo 
  
  
 GEN1008R032 
 missense_variant 
 c.2678C>T 
 p.Ala893Val 
 Unknown 
  
  
 GEN1008R033 
 missense_variant 
 c.2746C>A 
 p.Pro916Thr 
 De novo 
  
 Simplex 
 GEN1008R034 
 missense_variant 
 c.3395C>G 
 p.Pro1132Arg 
 De novo 
  
  
 GEN1008R035 
 missense_variant 
 c.3991G>A 
 p.Ala1331Thr 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
19
Duplication
 1
 
19
Deletion-Duplication
 19
 
19
Deletion-Duplication
 4
 

No Animal Model Data Available

No PIN Data Available
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