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Relevance to Autism

De novo missense variants in the PRKCA gene have been identified in three ASD probands (De Rubeis et al., 2014; Iossifov et al., 2014) and two probands with unspecified developmental disorders (Deciphering Developmental Disorders Study 2017). An integrated meta-analysis of de novo mutation data from a combined dataset of 10,927 individuals with neurodevelopmental disorders identified PRKCA as a gene with an excess of missense variants (false discovery rata < 5%, count >1) (Coe et al., 2018).

Molecular Function

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, tumorigenesis, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
ASD
iD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Prevalence and architecture of de novo mutations in developmental disorders
DD
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Recent Recommendation
Neurodevelopmental disease genes implicated by de novo mutation and copy number variation morbidity.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1072R001 
 missense_variant 
 c.533G>A 
 p.Arg178Gln 
 De novo 
  
  
 GEN1072R002 
 missense_variant 
 c.1541C>T 
 p.Pro514Leu 
 De novo 
  
 Simplex 
 GEN1072R003 
 missense_variant 
 c.713G>A 
 p.Arg238Gln 
 De novo 
  
 Simplex 
 GEN1072R004 
 missense_variant 
 c.1451T>C 
 p.Met484Thr 
 De novo 
  
  
 GEN1072R005 
 missense_variant 
 c.1151C>A 
 p.Thr384Asn 
 De novo 
  
  
 GEN1072R006 
 synonymous_variant 
 c.882C>T 
 p.Asp294%3D 
 De novo 
  
 Simplex 
 GEN1072R007 
 missense_variant 
 c.1738C>T 
 p.Arg580Trp 
 Familial 
 Maternal 
 Multiplex 
  et al.  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
17
Duplication
 1
 
17
Duplication
 1
 
17
Duplication
 1
 
17
Duplication
 1
 
17
Deletion
 2
 
17
Duplication
 1
 
17
Deletion
 1
 
17
Deletion
 13
 

No Animal Model Data Available

 

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