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Relevance to Autism

Common genetic variants and rare deletions in the PREX1 gene were found to associate with autism in a Han Chinese cohort; PREX1 mRNA levels were also significantly lower in peripheral blood cells from autistic individuals compared to controls (Li et al., 2015). In the same report, genetic deletion or knockdown of PREX1 in the CA1 region of the hippocampus in mice resulted in autism-like social behavior.

Molecular Function

The protein encoded by this gene acts as a guanine nucleotide exchange factor for the RHO family of small GTP-binding proteins (RACs). It has been shown to bind to and activate RAC1 by exchanging bound GDP for free GTP. The encoded protein, which is found mainly in the cytoplasm, is activated by phosphatidylinositol-3,4,5-trisphosphate and the beta-gamma subunits of heterotrimeric G proteins.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Synaptic P-Rex1 signaling regulates hippocampal long-term depression and autism-like social behavior.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Exploring the biological role of postzygotic and germinal de novo mutations in ASD
ASD
Support
Exome sequencing of 457 autism families recruited online provides evidence for autism risk genes
ASD
Recent Recommendation
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN791R001 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
 GEN791R002 
 missense_variant 
 c.1036G>C 
 p.Ala346Pro 
 De novo 
  
  
 GEN791R003 
 missense_variant 
 c.1579C>T 
 p.Pro527Ser 
 De novo 
  
 Simplex 
 GEN791R004 
 synonymous_variant 
 c.4095C>T 
 p.Arg1365%3D 
 De novo 
  
  
 GEN791R005 
 missense_variant 
 c.964G>A 
 p.Gly322Ser 
 Familial 
  
 Multiplex 

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN791C001 
 intergenic_variant 
 rs6066779 
  
  
 239 ASD trios of Han Chinese descent 
 Discovery 
 GEN791C002 
 intron_variant 
 rs3934721 
 c.2829-699G>A;c.3738-699G>A;c.3075-699G>A 
  
 239 ASD trios of Han Chinese descent 
 Discovery 
 GEN791C003 
 intron_variant 
 rs4076292 
 c.2657+226C>T;c.3566+226C>T;c.2903+226C>T 
  
 239 ASD trios of Han Chinese descent 
 Discovery 
 GEN791C004 
 intron_variant 
 rs4810845 
 c.2159-278A>C;c.3068-278A>C;c.2405-278A>C 
  
 239 ASD trios of Han Chinese descent 
 Discovery 
 GEN791C005 
 intron_variant 
 rs4455220 
 c.621+7810T>C;c.621+7811T>C 
  
 239 ASD trios of Han Chinese descent 
 Discovery 
 GEN791C006 
 intron_variant 
 rs6066835 
 c.415-3822A>G 
  
 239 ASD trios of Han Chinese descent 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
20
Duplication
 1
 
20
Deletion-Duplication
 14
 

No Animal Model Data Available


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme 5499 P62136 IP/WB
Li J , et al. 2015

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