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Relevance to Autism

Case-control and family-based association analysis of the PPP1R1B gene in a cohort of 112 male-only affected sib-pair ASD families and a comparison cohort of 443 controls revealed an increased frequency of the rs1495099 CC (p=0.002), rs907094 (p=0.028), and rs3764352 GG (p=0.025) genotypes in affected males compared to the comparison group (Hettinger et al., 2012). Family-based association tests in the same report showed significant over-transmission of the rs1495099 C allele (p=0.00092) to affected males under a recessive model.

Molecular Function

Inhibitor of protein-phosphatase 1. This gene encodes a bifunctional signal transduction molecule. Dopaminergic and glutamatergic receptor stimulation regulates its phosphorylation and function as a kinase or phosphatase inhibitor.

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References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
DRD2 and PPP1R1B (DARPP-32) polymorphisms independently confer increased risk for autism spectrum disorders and additively predict affected status ...
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN359R001 
 splice_site_variant 
 c.457+2dup 
  
 Familial 
 Paternal 
 Multiplex 

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN359C001 
 intron_variant, 2KB_upstream_variant 
 rs1495099 
 c.-439C>G;c.81+738C>G;c.-523C>G 
 G>C 
 Canada, the South Carolina Autism Project, and AGRE 
 Discovery 
 GEN359C002 
 intron_variant 
 rs907094 
 c.337+32G>A;c.445+32G>A 
 T/C 
 Canada, the South Carolina Autism Project, and AGRE 
 Discovery 
 GEN359C003 
 intron_variant 
 rs3764352 
 c.337+600C>T;c.445+600C>T 
 A>G 
 Canada, the South Carolina Autism Project, and AGRE 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
17
Duplication
 1
 
17
Duplication
 1
 

No Animal Model Data Available


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
ACTBL2 actin, beta-like 2 345651 Q562R1 IP; LC-MS/MS
Huttlin EL , et al. 2015
DLGAP4 discs, large (Drosophila) homolog-associated protein 4 22839 Q9Y2H0 Y2H
Stelzl U , et al. 2005
ERBB2 v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) 2064 P04626 IP/WB
Hong J , et al. 2012
KLHL6 kelch-like family member 6 89857 Q8WZ60 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha 5523 B4DNU1 in vitro kinase assay
Ahn JH , et al. 2007
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 6092 Q9HCK4 Y2H
Stelzl U , et al. 2005
SRSF3 serine/arginine-rich splicing factor 3 6428 B2R6F3 IP/WB
Zhu S , et al. 2015
TFCP2 transcription factor CP2 7024 Q12800 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
TRA2B transformer 2 beta homolog (Drosophila) 6434 P62995 IP/WB; qRT-PCR
Benderska N , et al. 2010
Cdk5 cyclin-dependent kinase 5 12568 P49615 IP/WB; in vitro kinase assay
Bibb JA , et al. 1999
Egr1 early growth response 1 13653 P08046 IP; MS; Supershift assay; ChIP
Keilani S , et al. 2012
Prkaca protein kinase, cAMP dependent, catalytic, alpha 18747 P05132 in vitro kinase assay
Bibb JA , et al. 1999
Add2 adducin 2 24171 Q05764 IP; LC-MS/MS; IP/WB
Engmann O , et al. 2015
CSNK2A1 Casein kinase II subunit alpha 100301533 P33674 in vitro kinase assay; Phosphopeptide mapping
Girault JA , et al. 1989
CSNK2A2 casein kinase 2, alpha prime polypeptide 1459 P19784 in vitro kinase assay
Engmann O , et al. 2015
CSNK2A2 casein kinase 2, alpha prime polypeptide 282420 P20427 in vitro kinase assay; Phosphopeptide mapping
Girault JA , et al. 1989
CSNK2B casein kinase 2, beta polypeptide 1460 P67870 in vitro kinase assay
Engmann O , et al. 2015
Ppp1ca N/A 24668 N/A IP; MS
Cid C , et al. 2007
Ppp1cc protein phosphatase 1, catalytic subunit, gamma isozyme 24669 Q6AYZ4 IP; MS
Cid C , et al. 2007

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