Summary Statistics:
ASD Reports: 3
Recent Reports: 0
Annotated variants: 4
Associated CNVs: 2
Evidence score: 2
Gene Score: 4
Relevance to Autism
The PLAUR promoter variant rs344781 T allele was associated with ASD by both family-based association tests (P=0.006) and case-control analyses (P=0.007) in an association study of genes encoding proteins that regulate MET expression and activity in 664 families (2,712 individuals including 1,228 with ASD) and 312 unrelated controls (Campbell et al., 2008).
Molecular Function
This gene encodes the receptor for urokinase plasminogen activator and, given its role in localizing and promoting plasmin formation, likely influences many normal and pathological processes related to cell-surface plasminogen activation and localized degradation of the extracellular matrix. PLAUR is expressed in neurons of the rolandic area of the brain (at protein level).
References
Primary
Genetic evidence implicating multiple genes in the MET receptor tyrosine kinase pathway in autism spectrum disorder.
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
GEN371R001
stop_gained
c.109G>T
p.Glu37Ter
Familial
Maternal
Multiplex
GEN371R002
missense_variant
c.332G>T
p.Arg111Leu
De novo
GEN371R003
missense_variant
c.238C>T
p.Arg80Trp
De novo
GEN371C001
2KB_upstream_variant
rs344781
c.-516G>A
C/T
AGRE Consortium, Iowa, Stanford, and Tufts-Vanderbilt
Discovery
19
Deletion-Duplication
19
Summary Statistics:
# of Reports: 1
# of Models: 1
Model Summary
Alteration of development of cortical interneurons in a region- and cell subtype-specific manner, with deficits leading to long-lasting changes in circuit organization and behavior.
References
Primary
Genetic disruption of cortical interneuron development causes region- and GABA cell type-specific deficits, epilepsy, and behavioral dysfunction.
Model Type:
Genetic
Model Genotype:
Homozygous
Mutation:
.
Allele Type: Targeted (Knock Out)
Strain of Origin: Not Specified
Genetic Background: Not Specified
ES Cell Line: Not Specified
Mutant ES Cell Line: Not Specified
Model Source: Not Specified
Decreased
View More
Description: Decreased number of parvalbumin expression gaba + cells in cortex
Exp Paradigm: Double-label immunohistochemistry of brain slices
Immunohistochemistry
Unreported
Neuronal number: purkinje cells1
Decreased
View More
Description: Decreased number of gaba-immunopositive cells in parietal cortex and anterior cingulate regions
Exp Paradigm: Immunocytochemical analysis of cerebral cortex with anti-gaba antibodies and quantification of cells in 200 micrometer strips
Immunohistochemistry
Unreported
Increased
View More
Description: Increased susceptibility to chemically induced seizures by convulsant ptz
Exp Paradigm: Electrocorticograph recording of mice after injection of convulsant ptz
Electrocorticogram (ecog)
Unreported
Increased
View More
Description: Increased incidence of spontaneous seizures
Exp Paradigm: General observations; video/electrographic recordings
General observations
Unreported
Increased
View More
Description: Increased anxiety
Exp Paradigm: Light-dark avoidance test for anxiety
Light-dark exploration test
Unreported
Increased
View More
Description: Increased anxiety
Exp Paradigm: Elevated plus maze test
Elevated plus maze test
Unreported
Increased
View More
Description: Increased anxiety
Exp Paradigm: Open-field test for anxiety
Open field test
Unreported
Protein expression level evidence1
Decreased
View More
Description: Decreased expression of gabaergic interneuron molecular marker parvalbumin (pv) in parietal and anterior cingulate cortex
Exp Paradigm: Parvalbumin expression
Immunohistochemistry
Unreported
No change
Immunohistochemistry
Unreported
Protein expression level evidence1
No change
Immunohistochemistry
Unreported
No change
Histology
Unreported
Not Reported:
Circadian sleep/wake cycle, Communications, Developmental profile, Immune response, Learning & memory, Maternal behavior, Motor phenotype, Neurophysiology, Physiological parameters, Repetitive behavior, Sensory, Social behavior
Summary Statistics:
Total Interactions: 108
Total Publications: 25
Show all nodes
Hide non-ASD
Interactor Symbol
Interactor Name
Interactor Organism
Entrez ID
Uniprot ID
Interaction Type
Evidence
Reference
ADCK1
Uncharacterized aarF domain-containing protein kinase 1
57143
Q86TW2-2
IP; LC-MS/MS
Huttlin EL , et al. 2015
ARSA
Arylsulfatase A
410
P15289
IP; LC-MS/MS
Huttlin EL , et al. 2015
ARSB
arylsulfatase B
411
P15848
IP; LC-MS/MS
Huttlin EL , et al. 2015
ARSK
arylsulfatase family, member K
NM_198150
Q6UWY0
IP; LC-MS/MS
Huttlin EL , et al. 2015
BMP8B
ESRRB
656
P34820
IP; LC-MS/MS
Huttlin EL , et al. 2015
C3ORF39
glycosyltransferase-like domain containing 2
84892
Q8NAT1
IP; LC-MS/MS
Huttlin EL , et al. 2015
C3ORF64
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
285203
Q5NDL2
IP; LC-MS/MS
Huttlin EL , et al. 2015
CCRN4L
CCR4 carbon catabolite repression 4-like (S. cerevisiae)
25819
Q8WTX0
IP; LC-MS/MS
Huttlin EL , et al. 2015
CHSY1
chondroitin sulfate synthase 1
22856
Q86X52
IP; LC-MS/MS
Huttlin EL , et al. 2015
CHSY3
chondroitin sulfate synthase 3
337876
Q70JA7
IP; LC-MS/MS
Huttlin EL , et al. 2015
CNTNAP3B
Contactin-associated protein-like 3B
Q96NU0
IP; LC-MS/MS
Huttlin EL , et al. 2015
CTSA
cathepsin A
5476
P10619
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
CTTN
cortactin
2017
Q14247
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
DDX11
DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
1663
Q96FC9
IP; LC-MS/MS
Huttlin EL , et al. 2015
DDX11L8
Putative ATP-dependent RNA helicase DDX11-like protein 8
A8MPP1
IP; LC-MS/MS
Huttlin EL , et al. 2015
DHFRL1
dihydrofolate reductase-like 1
200895
Q86XF0
IP; LC-MS/MS
Huttlin EL , et al. 2015
DHRS4
Dehydrogenase/reductase SDR family member 4
10901
Q9BTZ2
IP; LC-MS/MS
Huttlin EL , et al. 2015
DNAJB9
DnaJ (Hsp40) homolog, subfamily B, member 9
4189
Q6FIF1
IP; LC-MS/MS
Huttlin EL , et al. 2015
EEF1A1
eukaryotic translation elongation factor 1 alpha 1
1915
P68104
Y2H
Stelzl U , et al. 2005
EGFR
epidermal growth factor receptor
1956
P00533
IP/WB
Liu D , et al. 2002
ELAVL1
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)
1994
Q15717
in vitro binding assay; GST
Tran H , et al. 2003
EMILIN3
elastin microfibril interfacer 3
90187
Q9NT22
IP; LC-MS/MS
Huttlin EL , et al. 2015
EXT1
exostosin 1
2131
Q16394
IP; LC-MS/MS
Huttlin EL , et al. 2015
FAP
fibroblast activation protein, alpha
2191
Q12884
FRET
Artym VV , et al. 2002
FBLN5
fibulin 5
10516
Q9UBX5
IP; MS; IP/WB; in vitro binding assay
Kapustin A , et al. 2012
FGR
Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog
2268
P09769
IP/WB; in vitro kinase assay
Dumler I , et al. 1998
FOXP2
forkhead box P2
93986
O15409
in silico target prediction; qRT-PCR; Luciferase reporter assay; EMSA
Roll P , et al. 2010
FUT11
fucosyltransferase 11 (alpha (1,3) fucosyltransferase)
170384
Q495W5
IP; LC-MS/MS
Huttlin EL , et al. 2015
FYN
FYN oncogene related to SRC, FGR, YES
2534
P06241
IP/WB; in vitro kinase assay
Dumler I , et al. 1998
GALNS
N-acetylgalactosamine-6-sulfatase
2588
P34059
IP; LC-MS/MS
Huttlin EL , et al. 2015
GCLM
glutamate-cysteine ligase, modifier subunit
2730
P48507
IP; LC-MS/MS
Huttlin EL , et al. 2015
GLB1
galactosidase, beta 1
2720
P16278
IP; LC-MS/MS
Huttlin EL , et al. 2015
GYLTL1B
Glycosyltransferase-like protein LARGE2
120071
Q8N3Y3
IP; LC-MS/MS
Huttlin EL , et al. 2015
HCK
hemopoietic cell kinase
3055
P08631
IP/WB; in vitro kinase assay
Dumler I , et al. 1998
HDLBP
high density lipoprotein binding protein
3069
Q00341
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
HUS1
HUS1 checkpoint homolog (S. pombe)
3364
A4D2F2
IP; LC-MS/MS
Huttlin EL , et al. 2015
IGF2R
insulin-like growth factor 2 receptor
3482
P11717
I-125 binding assay; Surface plasmon resonance (SPR)
Nykjaer A , et al. 1998
IL6ST
interleukin 6 signal transducer (gp130, oncostatin M receptor)
3572
P40189
IP/WB
Koshelnick Y , et al. 1997
ITGA5
integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
3678
P08648
IP/WB
Cao DJ , et al. 2004
ITGAM
integrin, alpha M (complement component 3 receptor 3 subunit)
3684
P11215
Biotinylation assay; Adhesion assay; IP/WB
Simon DI , et al. 2000
ITGAV
integrin, alpha V
3685
B7ZLX0
IP/WB
Cao DJ , et al. 2004
ITGB1
integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
3688
P05556
IP/WB
Yebra M , et al. 1999
ITGB3
integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
3690
P05106
IP/WB
Cao DJ , et al. 2004
JAK1
Janus kinase 1
3716
P23458
IP/WB; in vitro kinase assay
Dumler I , et al. 1998
JUN
jun proto-oncogene
3725
P05412
ChIP
Leupold JH , et al. 2007
JUND
jun D proto-oncogene
3727
P17535
ChIP
Leupold JH , et al. 2007
KNG1
kininogen 1
3827
P01042
Biotinylation assay
Mahdi F , et al. 2004
LAMB2
laminin, beta 2 (laminin S)
3913
P55268
IP; LC-MS/MS
Huttlin EL , et al. 2015
LARGE
Glycosyltransferase-like protein LARGE1
9215
O95461
IP; LC-MS/MS
Huttlin EL , et al. 2015
LEPREL2
leprecan-like 2
10536
Q8IVL6
IP; LC-MS/MS
Huttlin EL , et al. 2015
LOXL2
Lysyl oxidase homolog 2
4017
Q9Y4K0
IP; LC-MS/MS
Huttlin EL , et al. 2015
LRP1
low density lipoprotein receptor-related protein 1
4035
Q07954
IP/WB; I-125 binding assay; Soluble binding assay
Czekay RP , et al. 2001
LYN
v-yes-1 Yamaguchi sarcoma viral related oncogene homolog
4067
P07948
IP/WB; in vitro kinase assay
Dumler I , et al. 1998
MAN1A1
mannosidase, alpha, class 1A, member 1
4121
P33908
IP; LC-MS/MS
Huttlin EL , et al. 2015
MAN2A1
mannosidase, alpha, class 2A, member 1
4124
Q16706
IP; LC-MS/MS
Huttlin EL , et al. 2015
MANEA
mannosidase, endo-alpha
79694
Q5SRI9
IP; LC-MS/MS
Huttlin EL , et al. 2015
MBTPS1
membrane-bound transcription factor peptidase, site 1
8720
Q14703
IP; LC-MS/MS
Huttlin EL , et al. 2015
MCM9
minichromosome maintenance complex component 9
254394
Q9NXL9
IP; LC-MS/MS
Huttlin EL , et al. 2015
MELK
maternal embryonic leucine zipper kinase
9833
B7Z5M5
IP; LC-MS/MS
Huttlin EL , et al. 2015
MGAT4B
mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B
11282
Q9UQ53
IP; LC-MS/MS
Huttlin EL , et al. 2015
MGAT5
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
4249
Q09328
IP; LC-MS/MS
Huttlin EL , et al. 2015
MMP9
matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)
4318
P14780
IP/WB; in vitro proteolysis assay
Bjrklund M , et al. 2004
NAGLU
N-acetylglucosaminidase, alpha
4669
P54802
IP; LC-MS/MS
Huttlin EL , et al. 2015
NDST1
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
3340
A8K8T3
IP; LC-MS/MS
Huttlin EL , et al. 2015
NDST2
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
8509
B4E139
IP; LC-MS/MS
Huttlin EL , et al. 2015
NEK4
NIMA-related kinase 4
6787
P51957
IP; LC-MS/MS
Huttlin EL , et al. 2015
NOTCH2
notch 2
4853
Q04721
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
OXCT1
3-oxoacid CoA transferase 1
5019
P55809
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
PCSK5
Proprotein convertase subtilisin/kexin type 5
5125
Q92824
IP; LC-MS/MS
Huttlin EL , et al. 2015
PCYOX1
prenylcysteine oxidase 1
51449
Q9UHG3
IP; LC-MS/MS
Huttlin EL , et al. 2015
PFN2
profilin 2
5217
P35080
Y2H
Stelzl U , et al. 2005
PI4K2B
phosphatidylinositol 4-kinase type 2 beta
55300
Q8TCG2
IP; LC-MS/MS
Huttlin EL , et al. 2015
PKN1
protein kinase N1
5585
Q16512
IP; LC-MS/MS
Huttlin EL , et al. 2015
PLAU
plasminogen activator, urokinase
5328
P00749
EMSA; Ligand binding assay
Cubellis MV , et al. 1986
PLTP
Phospholipid transfer protein
5360
P55058-2
IP; LC-MS/MS
Huttlin EL , et al. 2015
POGLUT1
Protein O-glucosyltransferase 1
56983
Q8NBL1
IP; LC-MS/MS
Huttlin EL , et al. 2015
PSAP
prosaposin
5660
P07602
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
PTPN11
protein tyrosine phosphatase, non-receptor type 11
5781
Q06124
IP/WB
Carlin SM , et al. 2005
PXDN
peroxidasin homolog (Drosophila)
7837
Q92626
IP; LC-MS/MS
Huttlin EL , et al. 2015
RPUSD3
RNA pseudouridylate synthase domain-containing protein 3
285367
Q6P087-2
IP; LC-MS/MS
Huttlin EL , et al. 2015
SCAF4
SR-related CTD-associated factor 4
57466
C9JLZ0
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
SDHAF2
succinate dehydrogenase complex assembly factor 2
54949
Q9NX18
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
SELENBP1
selenium binding protein 1
8991
Q13228
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
SGSH
N-sulfoglucosamine sulfohydrolase
6448
P51688
IP; LC-MS/MS
Huttlin EL , et al. 2015
SORL1
sortilin-related receptor, L(DLR class) A repeats containing
6653
Q92673
I-125 binding assay; Surface plasmon resonance (SPR)
Gliemann J , et al. 2004
SP1
Sp1 transcription factor
6667
P08047
ChIP
Leupold JH , et al. 2007
SRC
v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)
6714
P12931
CAT reporter assay
Leupold JH , et al. 2007
SRPX2
sushi-repeat containing protein, X-linked 2
27286
O60687
Y2H; IP/WB; Surface plasmon resonance (SPR)
Royer-Zemmour B , et al. 2008
ST3GAL4
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4
6484
Q11206-2
IP; LC-MS/MS
Huttlin EL , et al. 2015
SURF2
surfeit 2
6835
Q15527
Y2H
Stelzl U , et al. 2005
TATDN2
TatD DNase domain containing 2
9797
Q93075
IP; LC-MS/MS
Huttlin EL , et al. 2015
TAZ
Tafazzin
6901
Q16635-2
IP; LC-MS/MS
Huttlin EL , et al. 2015
TBCA
tubulin folding cofactor A
6902
O75347
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
TOP2B
topoisomerase (DNA) II beta 180kDa
7155
Q02880
IP; LC-MS/MS
Huttlin EL , et al. 2015
TUBA4A
tubulin, alpha 4a
7277
P68366
IP; LC-MS/MS
Huttlin EL , et al. 2015
TUBB3
tubulin, beta 3 class III
10381
A8K854
IP; LC-MS/MS
Huttlin EL , et al. 2015
TXNDC16
Thioredoxin domain-containing protein 16
57544
Q9P2K2
IP; LC-MS/MS
Huttlin EL , et al. 2015
TXNDC17
thioredoxin domain containing 17
84817
Q9BRA2
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
TYK2
tyrosine kinase 2
7297
P29597
IP/WB; in vitro kinase assay
Dumler I , et al. 1998
UBE3A
ubiquitin protein ligase E3A
7337
Q05086
IP; LC-MS/MS
Huttlin EL , et al. 2015
UBQLN2
ubiquilin 2
29978
Q9UHD9
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
VMA21
VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
203547
Q3ZAQ7
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
VTN
vitronectin
7448
D9ZGG2
Biotinylation assay
Deng G , et al. 1996
WDHD1
WD repeat and HMG-box DNA binding protein 1
11169
C9JW18
IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
XRCC3
X-ray repair complementing defective repair in Chinese hamster cells 3
7517
O43542
IP; LC-MS/MS
Huttlin EL , et al. 2015
Mmp12
matrix metallopeptidase 12
17381
P34960
in vitro proteolysis assay
Andolfo A , et al. 2002
Nfatc1
nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
18018
B5B2N5
ChIP
Zhang B , et al. 2012