HELP     Sign In
Search

Relevance to Autism

The PLAUR promoter variant rs344781 T allele was associated with ASD by both family-based association tests (P=0.006) and case-control analyses (P=0.007) in an association study of genes encoding proteins that regulate MET expression and activity in 664 families (2,712 individuals including 1,228 with ASD) and 312 unrelated controls (Campbell et al., 2008).

Molecular Function

This gene encodes the receptor for urokinase plasminogen activator and, given its role in localizing and promoting plasmin formation, likely influences many normal and pathological processes related to cell-surface plasminogen activation and localized degradation of the extracellular matrix. PLAUR is expressed in neurons of the rolandic area of the brain (at protein level).

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Genetic evidence implicating multiple genes in the MET receptor tyrosine kinase pathway in autism spectrum disorder.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN371R001 
 stop_gained 
 c.109G>T 
 p.Glu37Ter 
 Familial 
 Maternal 
 Multiplex 
 GEN371R002 
 missense_variant 
 c.332G>T 
 p.Arg111Leu 
 De novo 
  
  
 GEN371R003 
 missense_variant 
 c.238C>T 
 p.Arg80Trp 
 De novo 
  
  

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN371C001 
 2KB_upstream_variant 
 rs344781 
 c.-516G>A 
 C/T 
 AGRE Consortium, Iowa, Stanford, and Tufts-Vanderbilt 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
19
Deletion
 6
 
19
Deletion-Duplication
 19
 

Model Summary

Alteration of development of cortical interneurons in a region- and cell subtype-specific manner, with deficits leading to long-lasting changes in circuit organization and behavior.

References

Type
Title
Author, Year
Primary
Genetic disruption of cortical interneuron development causes region- and GABA cell type-specific deficits, epilepsy, and behavioral dysfunction.

M_PLAUR_1_KO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: .
Allele Type: Targeted (Knock Out)
Strain of Origin: Not Specified
Genetic Background: Not Specified
ES Cell Line: Not Specified
Mutant ES Cell Line: Not Specified
Model Source: Not Specified

M_PLAUR_1_KO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Neuronal number: purkinje cells1
Decreased
Description: Decreased number of gaba-immunopositive cells in parietal cortex and anterior cingulate regions
Exp Paradigm: Immunocytochemical analysis of cerebral cortex with anti-gaba antibodies and quantification of cells in 200 micrometer strips
 Immunohistochemistry
 Unreported
Brain cytoarchitecture1
Decreased
Description: Decreased number of parvalbumin expression gaba + cells in cortex
Exp Paradigm: Double-label immunohistochemistry of brain slices
 Immunohistochemistry
 Unreported
Seizures1
Increased
Description: Increased susceptibility to chemically induced seizures by convulsant ptz
Exp Paradigm: Electrocorticograph recording of mice after injection of convulsant ptz
 Electrocorticogram (ecog)
 Unreported
Seizures1
Increased
Description: Increased incidence of spontaneous seizures
Exp Paradigm: General observations; video/electrographic recordings
 General observations
 Unreported
Anxiety1
Increased
Description: Increased anxiety
Exp Paradigm: Open-field test for anxiety
 Open field test
 Unreported
Anxiety1
Increased
Description: Increased anxiety
Exp Paradigm: Light-dark avoidance test for anxiety
 Light-dark exploration test
 Unreported
Anxiety1
Increased
Description: Increased anxiety
Exp Paradigm: Elevated plus maze test
 Elevated plus maze test
 Unreported
Protein expression level evidence1
Decreased
Description: Decreased expression of gabaergic interneuron molecular marker parvalbumin (pv) in parietal and anterior cingulate cortex
Exp Paradigm: Parvalbumin expression
 Immunohistochemistry
 Unreported
Gene expression1
 No change
 Immunohistochemistry
 Unreported
Protein expression level evidence1
 No change
 Immunohistochemistry
 Unreported
Brain anatomy1
 No change
 Histology
 Unreported
 Not Reported: Circadian sleep/wake cycle, Communications, Developmental profile, Immune response, Learning & memory, Maternal behavior, Motor phenotype, Neurophysiology, Physiological parameters, Repetitive behavior, Sensory, Social behavior


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
ADCK1 Uncharacterized aarF domain-containing protein kinase 1 57143 Q86TW2-2 IP; LC-MS/MS
Huttlin EL , et al. 2015
ARSA Arylsulfatase A 410 P15289 IP; LC-MS/MS
Huttlin EL , et al. 2015
ARSB arylsulfatase B 411 P15848 IP; LC-MS/MS
Huttlin EL , et al. 2015
ARSK arylsulfatase family, member K NM_198150 Q6UWY0 IP; LC-MS/MS
Huttlin EL , et al. 2015
BMP8B ESRRB 656 P34820 IP; LC-MS/MS
Huttlin EL , et al. 2015
C3ORF39 glycosyltransferase-like domain containing 2 84892 Q8NAT1 IP; LC-MS/MS
Huttlin EL , et al. 2015
C3ORF64 EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase 285203 Q5NDL2 IP; LC-MS/MS
Huttlin EL , et al. 2015
CCRN4L CCR4 carbon catabolite repression 4-like (S. cerevisiae) 25819 Q8WTX0 IP; LC-MS/MS
Huttlin EL , et al. 2015
CHSY1 chondroitin sulfate synthase 1 22856 Q86X52 IP; LC-MS/MS
Huttlin EL , et al. 2015
CHSY3 chondroitin sulfate synthase 3 337876 Q70JA7 IP; LC-MS/MS
Huttlin EL , et al. 2015
CNTNAP3B Contactin-associated protein-like 3B Q96NU0 IP; LC-MS/MS
Huttlin EL , et al. 2015
CTSA cathepsin A 5476 P10619 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
CTTN cortactin 2017 Q14247 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 1663 Q96FC9 IP; LC-MS/MS
Huttlin EL , et al. 2015
DDX11L8 Putative ATP-dependent RNA helicase DDX11-like protein 8 A8MPP1 IP; LC-MS/MS
Huttlin EL , et al. 2015
DHFRL1 dihydrofolate reductase-like 1 200895 Q86XF0 IP; LC-MS/MS
Huttlin EL , et al. 2015
DHRS4 Dehydrogenase/reductase SDR family member 4 10901 Q9BTZ2 IP; LC-MS/MS
Huttlin EL , et al. 2015
DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9 4189 Q6FIF1 IP; LC-MS/MS
Huttlin EL , et al. 2015
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 1915 P68104 Y2H
Stelzl U , et al. 2005
EGFR epidermal growth factor receptor 1956 P00533 IP/WB
Liu D , et al. 2002
ELAVL1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) 1994 Q15717 in vitro binding assay; GST
Tran H , et al. 2003
EMILIN3 elastin microfibril interfacer 3 90187 Q9NT22 IP; LC-MS/MS
Huttlin EL , et al. 2015
EXT1 exostosin 1 2131 Q16394 IP; LC-MS/MS
Huttlin EL , et al. 2015
FAP fibroblast activation protein, alpha 2191 Q12884 FRET
Artym VV , et al. 2002
FBLN5 fibulin 5 10516 Q9UBX5 IP; MS; IP/WB; in vitro binding assay
Kapustin A , et al. 2012
FGR Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog 2268 P09769 IP/WB; in vitro kinase assay
Dumler I , et al. 1998
FOXP2 forkhead box P2 93986 O15409 in silico target prediction; qRT-PCR; Luciferase reporter assay; EMSA
Roll P , et al. 2010
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) 170384 Q495W5 IP; LC-MS/MS
Huttlin EL , et al. 2015
FYN FYN oncogene related to SRC, FGR, YES 2534 P06241 IP/WB; in vitro kinase assay
Dumler I , et al. 1998
GALNS N-acetylgalactosamine-6-sulfatase 2588 P34059 IP; LC-MS/MS
Huttlin EL , et al. 2015
GCLM glutamate-cysteine ligase, modifier subunit 2730 P48507 IP; LC-MS/MS
Huttlin EL , et al. 2015
GLB1 galactosidase, beta 1 2720 P16278 IP; LC-MS/MS
Huttlin EL , et al. 2015
GYLTL1B Glycosyltransferase-like protein LARGE2 120071 Q8N3Y3 IP; LC-MS/MS
Huttlin EL , et al. 2015
HCK hemopoietic cell kinase 3055 P08631 IP/WB; in vitro kinase assay
Dumler I , et al. 1998
HDLBP high density lipoprotein binding protein 3069 Q00341 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
HUS1 HUS1 checkpoint homolog (S. pombe) 3364 A4D2F2 IP; LC-MS/MS
Huttlin EL , et al. 2015
IGF2R insulin-like growth factor 2 receptor 3482 P11717 I-125 binding assay; Surface plasmon resonance (SPR)
Nykjaer A , et al. 1998
IL6ST interleukin 6 signal transducer (gp130, oncostatin M receptor) 3572 P40189 IP/WB
Koshelnick Y , et al. 1997
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 3678 P08648 IP/WB
Cao DJ , et al. 2004
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) 3684 P11215 Biotinylation assay; Adhesion assay; IP/WB
Simon DI , et al. 2000
ITGAV integrin, alpha V 3685 B7ZLX0 IP/WB
Cao DJ , et al. 2004
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 3688 P05556 IP/WB
Yebra M , et al. 1999
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 3690 P05106 IP/WB
Cao DJ , et al. 2004
JAK1 Janus kinase 1 3716 P23458 IP/WB; in vitro kinase assay
Dumler I , et al. 1998
JUN jun proto-oncogene 3725 P05412 ChIP
Leupold JH , et al. 2007
JUND jun D proto-oncogene 3727 P17535 ChIP
Leupold JH , et al. 2007
KNG1 kininogen 1 3827 P01042 Biotinylation assay
Mahdi F , et al. 2004
LAMB2 laminin, beta 2 (laminin S) 3913 P55268 IP; LC-MS/MS
Huttlin EL , et al. 2015
LARGE Glycosyltransferase-like protein LARGE1 9215 O95461 IP; LC-MS/MS
Huttlin EL , et al. 2015
LEPREL2 leprecan-like 2 10536 Q8IVL6 IP; LC-MS/MS
Huttlin EL , et al. 2015
LOXL2 Lysyl oxidase homolog 2 4017 Q9Y4K0 IP; LC-MS/MS
Huttlin EL , et al. 2015
LRP1 low density lipoprotein receptor-related protein 1 4035 Q07954 IP/WB; I-125 binding assay; Soluble binding assay
Czekay RP , et al. 2001
LYN v-yes-1 Yamaguchi sarcoma viral related oncogene homolog 4067 P07948 IP/WB; in vitro kinase assay
Dumler I , et al. 1998
MAN1A1 mannosidase, alpha, class 1A, member 1 4121 P33908 IP; LC-MS/MS
Huttlin EL , et al. 2015
MAN2A1 mannosidase, alpha, class 2A, member 1 4124 Q16706 IP; LC-MS/MS
Huttlin EL , et al. 2015
MANEA mannosidase, endo-alpha 79694 Q5SRI9 IP; LC-MS/MS
Huttlin EL , et al. 2015
MBTPS1 membrane-bound transcription factor peptidase, site 1 8720 Q14703 IP; LC-MS/MS
Huttlin EL , et al. 2015
MCM9 minichromosome maintenance complex component 9 254394 Q9NXL9 IP; LC-MS/MS
Huttlin EL , et al. 2015
MELK maternal embryonic leucine zipper kinase 9833 B7Z5M5 IP; LC-MS/MS
Huttlin EL , et al. 2015
MGAT4B mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B 11282 Q9UQ53 IP; LC-MS/MS
Huttlin EL , et al. 2015
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 4249 Q09328 IP; LC-MS/MS
Huttlin EL , et al. 2015
MMP9 matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase) 4318 P14780 IP/WB; in vitro proteolysis assay
Bjrklund M , et al. 2004
NAGLU N-acetylglucosaminidase, alpha 4669 P54802 IP; LC-MS/MS
Huttlin EL , et al. 2015
NDST1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 3340 A8K8T3 IP; LC-MS/MS
Huttlin EL , et al. 2015
NDST2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 8509 B4E139 IP; LC-MS/MS
Huttlin EL , et al. 2015
NEK4 NIMA-related kinase 4 6787 P51957 IP; LC-MS/MS
Huttlin EL , et al. 2015
NOTCH2 notch 2 4853 Q04721 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
OXCT1 3-oxoacid CoA transferase 1 5019 P55809 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
PCSK5 Proprotein convertase subtilisin/kexin type 5 5125 Q92824 IP; LC-MS/MS
Huttlin EL , et al. 2015
PCYOX1 prenylcysteine oxidase 1 51449 Q9UHG3 IP; LC-MS/MS
Huttlin EL , et al. 2015
PFN2 profilin 2 5217 P35080 Y2H
Stelzl U , et al. 2005
PI4K2B phosphatidylinositol 4-kinase type 2 beta 55300 Q8TCG2 IP; LC-MS/MS
Huttlin EL , et al. 2015
PKN1 protein kinase N1 5585 Q16512 IP; LC-MS/MS
Huttlin EL , et al. 2015
PLAU plasminogen activator, urokinase 5328 P00749 EMSA; Ligand binding assay
Cubellis MV , et al. 1986
PLTP Phospholipid transfer protein 5360 P55058-2 IP; LC-MS/MS
Huttlin EL , et al. 2015
POGLUT1 Protein O-glucosyltransferase 1 56983 Q8NBL1 IP; LC-MS/MS
Huttlin EL , et al. 2015
PSAP prosaposin 5660 P07602 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
PTPN11 protein tyrosine phosphatase, non-receptor type 11 5781 Q06124 IP/WB
Carlin SM , et al. 2005
PXDN peroxidasin homolog (Drosophila) 7837 Q92626 IP; LC-MS/MS
Huttlin EL , et al. 2015
RPUSD3 RNA pseudouridylate synthase domain-containing protein 3 285367 Q6P087-2 IP; LC-MS/MS
Huttlin EL , et al. 2015
SCAF4 SR-related CTD-associated factor 4 57466 C9JLZ0 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
SDHAF2 succinate dehydrogenase complex assembly factor 2 54949 Q9NX18 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
SELENBP1 selenium binding protein 1 8991 Q13228 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
SGSH N-sulfoglucosamine sulfohydrolase 6448 P51688 IP; LC-MS/MS
Huttlin EL , et al. 2015
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 6653 Q92673 I-125 binding assay; Surface plasmon resonance (SPR)
Gliemann J , et al. 2004
SP1 Sp1 transcription factor 6667 P08047 ChIP
Leupold JH , et al. 2007
SRC v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian) 6714 P12931 CAT reporter assay
Leupold JH , et al. 2007
SRPX2 sushi-repeat containing protein, X-linked 2 27286 O60687 Y2H; IP/WB; Surface plasmon resonance (SPR)
Royer-Zemmour B , et al. 2008
ST3GAL4 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 6484 Q11206-2 IP; LC-MS/MS
Huttlin EL , et al. 2015
SURF2 surfeit 2 6835 Q15527 Y2H
Stelzl U , et al. 2005
TATDN2 TatD DNase domain containing 2 9797 Q93075 IP; LC-MS/MS
Huttlin EL , et al. 2015
TAZ Tafazzin 6901 Q16635-2 IP; LC-MS/MS
Huttlin EL , et al. 2015
TBCA tubulin folding cofactor A 6902 O75347 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
TOP2B topoisomerase (DNA) II beta 180kDa 7155 Q02880 IP; LC-MS/MS
Huttlin EL , et al. 2015
TUBA4A tubulin, alpha 4a 7277 P68366 IP; LC-MS/MS
Huttlin EL , et al. 2015
TUBB3 tubulin, beta 3 class III 10381 A8K854 IP; LC-MS/MS
Huttlin EL , et al. 2015
TXNDC16 Thioredoxin domain-containing protein 16 57544 Q9P2K2 IP; LC-MS/MS
Huttlin EL , et al. 2015
TXNDC17 thioredoxin domain containing 17 84817 Q9BRA2 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
TYK2 tyrosine kinase 2 7297 P29597 IP/WB; in vitro kinase assay
Dumler I , et al. 1998
UBE3A ubiquitin protein ligase E3A 7337 Q05086 IP; LC-MS/MS
Huttlin EL , et al. 2015
UBQLN2 ubiquilin 2 29978 Q9UHD9 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
VMA21 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) 203547 Q3ZAQ7 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
VTN vitronectin 7448 D9ZGG2 Biotinylation assay
Deng G , et al. 1996
WDHD1 WD repeat and HMG-box DNA binding protein 1 11169 C9JW18 IEX-HPLC/sucrose gradient/isoelectric focus/MS
Havugimana PC , et al. 2012
XRCC3 X-ray repair complementing defective repair in Chinese hamster cells 3 7517 O43542 IP; LC-MS/MS
Huttlin EL , et al. 2015
Mmp12 matrix metallopeptidase 12 17381 P34960 in vitro proteolysis assay
Andolfo A , et al. 2002
Nfatc1 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 18018 B5B2N5 ChIP
Zhang B , et al. 2012

HELP
Copyright © 2017 MindSpec, Inc.