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Relevance to Autism

De novo missense variants in the PIK3CA gene have been identified in ASD probands from multiple cohorts, including the Simons Simplex Collection, the MSSNG cohort, and the iHART cohort (Turner et al., 2016; Yuen et al., 2017; Takata et al., 2018; Ruzzo et al., 2019). Whole-exome sequencing of 21 patients with macrocephaly and developmental delay/autism spectrum disorder in Yeung et al., 2017 identified three patients with PIK3CA variants; all three patients presented with macrocephaly and global developmental delay, and one of these patients was also diagnosed with autism spectrum disorder.

Molecular Function

Phosphatidylinositol 3-kinase is composed of an 85 kDa regulatory subunit and a 110 kDa catalytic subunit. The protein encoded by this gene represents the catalytic subunit, which uses ATP to phosphorylate PtdIns, PtdIns4P and PtdIns(4,5)P2.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Genome Sequencing of Autism-Affected Families Reveals Disruption of Putative Noncoding Regulatory DNA
ASD
Support
Integrative Analyses of De Novo Mutations Provide Deeper Biological Insights into Autism Spectrum Disorder.
ASD
Support
Identification of mutations in the PI3K-AKT-mTOR signalling pathway in patients with macrocephaly and developmental delay and/or autism.
ASD, DD
Support
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Autism spectrum disorder in a child with megalencephaly-capillary malformation-polymicrogyria syndrome (MCAP)
Megalencephaly-capillary malformation-polymicrogyr
Support
Prevalence and phenotypic impact of rare potentially damaging variants in autism spectrum disorder
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1255R001 
 missense_variant 
 c.323G>A 
 p.Arg108His 
 De novo 
  
 Simplex 
 GEN1255R002 
 missense_variant 
 c.2309G>A 
 p.Arg770Gln 
 De novo 
  
 Simplex 
 GEN1255R003 
 missense_variant 
 c.263G>A 
 p.Arg88Gln 
 De novo 
  
  
 GEN1255R004 
 missense_variant 
 c.1030G>A 
 p.Val344Met 
 Familial 
 Maternal 
  
 GEN1255R005 
 missense_variant 
 c.2740G>A 
 p.Gly914Arg 
 De novo 
  
  
 GEN1255R006 
 missense_variant 
 c.2740G>A 
 p.Gly914Arg 
 De novo 
  
 Simplex 
 GEN1255R007 
 missense_variant 
 c.3143A>G 
 p.His1048Arg 
 De novo 
  
 Simplex 
 GEN1255R008 
 missense_variant 
 c.1346C>T 
 p.Pro449Leu 
 De novo 
  
 Multiplex 
 GEN1255R009 
 missense_variant 
 c.2716G>A 
 p.Val906Ile 
 Unknown 
  
  
 GEN1255R010 
 missense_variant 
 c.71G>A 
 p.Cys24Tyr 
 Unknown 
  
  
 GEN1255R011 
 initiator_codon_variant 
 c.1A>G 
 p.Met1? 
 De novo 
  
 Simplex 
 GEN1255R012 
 missense_variant 
 c.1955T>C 
 p.Phe652Ser 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
3
Duplication
 1
 
3
Duplication
 3
 
3
Duplication
 1
 
3
Duplication
 1
 
3
Duplication
 3
 
3
Duplication
 1
 
3
Deletion-Duplication
 16
 
3
Deletion-Duplication
 5
 
3
Duplication
 2
 

No Animal Model Data Available

 

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