PEX7
Homo sapiens
Gene Name: peroxisomal biogenesis factor 7
Aliases: RP11-55K22.6, PTS2R, RCDP1, RD
Chromosome No: 6
Chromosome Band: 6q23.3
Genetic Category: Genetic Association-Rare single gene variant
Aliases: RP11-55K22.6, PTS2R, RCDP1, RD
Chromosome No: 6
Chromosome Band: 6q23.3
Genetic Category: Genetic Association-Rare single gene variant
Summary Statistics:
ASD Reports: 5
Recent Reports: 1
Annotated variants: 6
Associated CNVs: 1
Evidence score: 2
ASD Reports: 5
Recent Reports: 1
Annotated variants: 6
Associated CNVs: 1
Evidence score: 2
Associated Disorders: |
|
Relevance to Autism
Genetic association has been found between the PEX7 gene and ASD in a Korean population cohort (Ro et al., 2012). A homozygous loss-of-function missense variant in the PEX7 gene was identified in three affected children born to consanguineous parents from a multiplex ASD pedigree; this variant was heterozygous in both parents and in three unaffected children (Yu et al., 2013).
Molecular Function
This gene encodes the cytosolic receptor for the set of peroxisomal matrix enzymes targeted to the organelle by the peroxisome targeting signal 2 (PTS2). Defects in this gene cause peroxisome biogenesis disorders (PBDs), which are characterized by multiple defects in peroxisome function.
References
Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Association between peroxisomal biogenesis factor 7 and autism spectrum disorders in a Korean population.
ASD
Support
Large-scale discovery of novel genetic causes of developmental disorders.
Unknown diagnosis
Support
Genome-wide detection of tandem DNA repeats that are expanded in autism
ASD
Recent Recommendation
Using whole-exome sequencing to identify inherited causes of autism.
ASD
Rare
Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
GEN326R001a
missense_variant
c.225G>C
p.Trp75Cys
Familial
Both parents
Multiplex
GEN326R002
missense_variant
c.883A>G
p.Ser295Gly
De novo
Unknown
Common
Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
GEN326C001
intron_variant
rs9494587
c.527-3273G>A;c.413-3273G>A;c.340-6536G>A;c.526+17173G>A
A/G
Korean
Discovery
GEN326C002
intron_variant
rs1342645
c.804-11976G>A;c.690-11976G>A;c.510-11976G>A;c.527-11976G>A
A/G
Korean
Discovery