HELP     Sign In
Search

Relevance to Autism

Li et al., 2023 determined that a de novo coding-synonymous variant in the PDHA1 gene originally identified in a Japanese ASD proband in Takata et al., 2018 was a non-canonical splicing variant; subsequent functional analysis by minigene splicing assays demonstrated that this variant resulted in deletion of 23 base pairs from exon 14 of this gene. A frameshift variant in the PDHA1 gene had previously been identified in a female ASD proband from the ASPIRE cohort (Callaghan et al., 2019).

Molecular Function

The pyruvate dehydrogenase (PDH) complex is a nuclear-encoded mitochondrial multienzyme complex that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2), and provides the primary link between glycolysis and the tricarboxylic acid (TCA) cycle. The PDH complex is composed of multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). The E1 enzyme is a heterotetramer of two alpha and two beta subunits. This gene encodes the E1 alpha 1 subunit containing the E1 active site, and plays a key role in the function of the PDH complex. Mutations in this gene are associated with pyruvate dehydrogenase E1-alpha deficiency and X-linked Leigh syndrome.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
ASD
Support
Epilepsy/seizures
DD
Support
Epilepsy/seizures
Support
Whole genome sequencing and variant discovery in the ASPIRE autism spectrum disorder cohort.
ASD
Support
Integrative Analyses of De Novo Mutations Provide Deeper Biological Insights into Autism Spectrum Disorder.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1429R001 
 synonymous_variant 
 c.852C>T 
 p.Gly284= 
 De novo 
  
 Simplex 
 GEN1429R002 
 frameshift_variant 
 c.1058_*3dup 
  
 Unknown 
  
 Simplex 
 GEN1429R003 
 stop_gained 
 c.1149G>A 
 p.Trp383Ter 
 De novo 
  
  
  et al.  
 GEN1429R004 
 missense_variant 
 c.379C>T 
 p.Arg127Trp 
 De novo 
  
  
  et al.  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
X
Deletion
 1
 
X
Deletion
 2
 
X
Deletion
 4
 
X
Deletion-Duplication
 1
 
X
Deletion
 1
 
X
Duplication
 1
 
X
Duplication
 2
 
X
Deletion
 4
 
X
Deletion
 1
 
X
Deletion
 1
 
X
Deletion-Duplication
 21
 

No Animal Model Data Available

 

No Interactions Available
HELP
Copyright © 2017 MindSpec, Inc.