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Relevance to Autism

De novo missense variants in the PAPOLG gene have been identified in three ASD probands (De Rubeis et al., 2014; Yuen et al., 2017). An integrated meta-analysis of de novo mutation data from a combined dataset of 10,927 individuals with neurodevelopmental disorders identified PAPOLG as a gene with an excess of missense variants with CADD scores > 30 (false discovery rata < 5%, count >1) (Coe et al., 2018).

Molecular Function

This gene encodes a member of the poly(A) polymerase family which catalyzes template-independent extension of the 3' end of a DNA/RNA strand. Responsible for the post-transcriptional adenylation of the 3'-terminal of mRNA precursors and several small RNAs including signal recognition particle (SRP) RNA, nuclear 7SK RNA, U2 small nuclear RNA, and ribosomal 5S RNA.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Recent Recommendation
Neurodevelopmental disease genes implicated by de novo mutation and copy number variation morbidity.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1067R001 
 missense_variant 
 c.1249C>A 
 p.Pro417Thr 
 De novo 
  
  
 GEN1067R002 
 missense_variant 
 c.947C>T 
 p.Thr316Ile 
 De novo 
  
 Multiplex 
 GEN1067R003 
 stop_gained 
 c.1996C>T 
 p.Arg666Ter 
 Familial 
 Paternal 
 Multiplex 
 GEN1067R004 
 missense_variant 
 c.816T>G 
 p.Phe272Leu 
 De novo 
  
  
 GEN1067R005 
 missense_variant 
 c.816T>G 
 p.Phe272Leu 
 De novo 
  
 Simplex 
 GEN1067R006 
 missense_variant 
 c.1308G>T 
 p.Trp436Cys 
 De novo 
  
  
 GEN1067R007 
 missense_variant 
 c.1918A>G 
 p.Thr640Ala 
 De novo 
  
  
 GEN1067R008 
 missense_variant 
 c.940A>T 
 p.Ile314Leu 
 De novo 
  
  
 GEN1067R009 
 splice_region_variant 
 c.1396+3A>G 
  
 De novo 
  
  
 GEN1067R010 
 frameshift_variant 
 c.9_10del 
 p.Glu3AspfsTer23 
 Familial 
 Maternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
2
Deletion-Duplication
 20
 
2
Deletion
 1
 
2
Deletion
 10
 

No Animal Model Data Available

 

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