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Relevance to Autism

De novo missense variants in the PABPC1 gene have been identified in three ASD probands (De Rubeis et al., 2014; Krupp et al., 2017; Guo et al., 2019), as well as in two individuals with unspecified developmental disorders (Kaplanis et al., 2020). Wegler et al., 2022 described four probands with an overlapping phenotype of developmental delay with expressive speech delay, seizures, and behavioral issues including autistic features and heterozygous de novo variants that clustered in the PABP domain of PABPC1; functional analysis of the three missense variants identified in this report demonstrated reduced interaction between PABPC1 and PAIP2 and a failure to rescue the decrease of neural progenitor cells caused by Pabpc1 knockdown in the mouse brain.

Molecular Function

This gene encodes a poly(A) binding protein. The protein shuttles between the nucleus and cytoplasm and binds to the 3' poly(A) tail of eukaryotic messenger RNAs via RNA-recognition motifs. The binding of this protein to poly(A) promotes ribosome recruitment and translation initiation; it is also required for poly(A) shortening which is the first step in mRNA decay.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Evidence for 28 genetic disorders discovered by combining healthcare and research data
DD
Support
Genome sequencing identifies multiple deleterious variants in autism patients with more severe phenotypes.
ASD
Support
Exonic Mosaic Mutations Contribute Risk for Autism Spectrum Disorder.
ASD
Support
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD
Recent Recommendation
De novo variants in the PABP domain of PABPC1 lead to developmental delay
DD, ID, epilepsy/seizures
ASD or autistic features, ADHD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1336R001 
 missense_variant 
 c.412A>G 
 p.Lys138Glu 
 De novo 
  
  
 GEN1336R002 
 intron_variant 
 c.503+917T>G 
  
 De novo 
  
 Simplex 
 GEN1336R003 
 missense_variant 
 c.1417G>A 
 p.Val473Ile 
 De novo 
  
 Simplex 
 GEN1336R004 
 missense_variant 
 c.611A>T 
 p.Asp204Val 
 De novo 
  
 Multiplex 
 GEN1336R005 
 missense_variant 
 c.1442G>A 
 p.Arg481His 
 De novo 
  
  
 GEN1336R006 
 missense_variant 
 c.1367C>T 
 p.Pro456Leu 
 De novo 
  
  
 GEN1336R007 
 inframe_deletion 
 c.1664_1666del 
 p.Pro555del 
 De novo 
  
 Simplex 
 GEN1336R008 
 missense_variant 
 c.1687G>A 
 p.Gly563Ser 
 De novo 
  
 Simplex 
 GEN1336R009 
 missense_variant 
 c.1691A>G 
 p.Glu564Gly 
 De novo 
  
 Simplex 
 GEN1336R010 
 missense_variant 
 c.1709T>C 
 p.Ile570Thr 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 4
 

No Animal Model Data Available

 

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