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Relevance to Autism

Gene-based genome-wide association studies in a discovery cohort of 160 Belgian Flemish families with at least one child affected with non-syndromic ASD identified significant association of the ODAD4 gene (previously known as TTC25) with quantitative autistic trait using the Social Responsive Scale (SRS) and the Social Responsiveness Scale for Adults (SRS-A) (effect size=10.2, P=3.4E-07); this gene also showed nominally significant association (P=0.045) in the Erasmus Rucphen Family (ERF) general population cohort (Vojinovic et al., 2017). Gene-based association in the discovery cohort was driven by nine variants, four of which showed nominally significant association with quantitative autistic trait (P < 0.05); three of these variants were predicted to have regulatory functions according to RegulomeDB.

Molecular Function

This gene encodes a tetratricopeptide repeat domain-containing protein that localizes to ciliary axonmenes and plays a role in the docking of the outer dynein arm to cilia. Mutations in this gene cause severely reduced ciliary motility and the disorder CILD35 (ciliary dyskinesia,primary, 35). Primary ciliary dyskinesia is often associated with recurrent respiratory infections, immotile spermatozoa, and situs inversus; an inversion in left-right body symmetry.

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References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Variants in TTC25 affect autistic trait in patients with autism spectrum disorder and general population.
Quantitative autistic trait [as measured by the So

Rare

No Rare Variants Available

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN907C001 
 intron_variant 
 rs12936531 
 c.1058+659G>A;c.569+659G>A 
  
 160 Belgian Flemish families with at least one child affected with non-syndromic ASD (n=-486) 
 Discovery 
 GEN907C002 
 synonymous_variant 
 rs3809878 
 c.651C>T;c.162C>T 
 p.(=) 
 160 Belgian Flemish families with at least one child affected with non-syndromic ASD (n=-486) 
 Discovery 
 GEN907C003 
 intron_variant 
 rs4594300 
 c.1058+2761T>C;c.569+2761T>C 
  
 160 Belgian Flemish families with at least one child affected with non-syndromic ASD (n=-486) 
 Discovery 
 GEN907C004 
 intron_variant 
 rs4796750 
 c.1528+1060A>G;c.1427+1060A>G;c.1039+1060A>G 
  
 160 Belgian Flemish families with at least one child affected with non-syndromic ASD (n=-486) 
 Discovery 
 GEN907C005 
 intron_variant 
 rs9899099 
 c.1528+1103G>A;c.1427+1103G>A;c.1039+1103G>A 
  
 160 Belgian Flemish families with at least one child affected with non-syndromic ASD (n=-486) 
 Discovery 
 GEN907C006 
 missense_variant 
 rs34516580 
 c.10C>T 
 p.Pro4Ser 
 160 Belgian Flemish families with at least one child affected with non-syndromic ASD (n=-486) 
 Discovery 
 GEN907C007 
 intron_variant 
 rs4796743 
 c.1058+783A>G;c.569+783A>G 
  
 160 Belgian Flemish families with at least one child affected with non-syndromic ASD (n=-486) 
 Discovery 
 GEN907C008 
 intron_variant 
 rs75682304 
 c.1343-792G>C;c.1342+5076G>C;c.854-792G>C 
  
 160 Belgian Flemish families with at least one child affected with non-syndromic ASD (n=-486) 
 Discovery 
 GEN907C009 
 intron_variant 
 rs9303323 
 c.114+1018A>G;c.-298+1018A>G 
  
 160 Belgian Flemish families with at least one child affected with non-syndromic ASD (n=-486) 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model

No Animal Model Data Available

No PIN Data Available
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