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Relevance to Autism

This gene has been associated with syndromic autism, where a subpopulation of individuals with a given syndrome develop autism. In particular, rare mutations of the NSD1 gene have been identified with Sotos syndrome (Kurotaki et al., 2002). One study identified several rare variations of the NSD1 gene in individuals with ASD, although the variants were considered nonpathogenic (Buxbaum et al., 2007).

Molecular Function

This gene encodes a protein containing a SET domain, 2 LXXLL motifs, 3 nuclear translocation signals (NLSs), 4 plant homeodomain (PHD) finger regions, and a proline-rich region. The encoded protein enhances androgen receptor (AR) transactivation, and this enhancement can be increased further in the presence of other androgen receptor associated coregulators. This protein may act as a nucleus-localized, basic transcriptional factor and also as a bifunctional transcriptional regulator. Mutations of this gene have been associated with Sotos syndrome and Weaver syndrome. Two transcript variants encoding distinct isoforms have been identified for this gene.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Haploinsufficiency of NSD1 causes Sotos syndrome.
Sotos syndrome
ASD
Support
Performance comparison of bench-top next generation sequencers using microdroplet PCR-based enrichment for targeted sequencing in patients with aut...
ASD
ID, epilepsy
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD
Support
A clinical utility study of exome sequencing versus conventional genetic testing in pediatric neurology.
DD
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
Further Evidence of Contrasting Phenotypes Caused by Reciprocal Deletions and Duplications: Duplication of NSD1 Causes Growth Retardation and Micro...
Support
Diagnostic yield of next-generation sequencing in 87 families with neurodevelopmental disorders
DD, ID
Support
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD
Support
ASD
Support
Phenotype-to-genotype approach reveals head-circumference-associated genes in an autism spectrum disorder cohort.
ASD
Macrocephaly
Support
Mutation analysis of the NSD1 gene in patients with autism spectrum disorders and macrocephaly.
ASD
Support
A single center experience with publicly funded clinical exome sequencing for neurodevelopmental disorders or multiple congenital anomalies
DD, ID
Support
Clinical exome sequencing: results from 2819 samples reflecting 1000 families.
Sotos syndrome
DD
Support
Exome sequencing of 457 autism families recruited online provides evidence for autism risk genes
ASD
Support
ID
Support
Genetic and phenotypic analysis of 101 patients with developmental delay or intellectual disability using whole-exome sequencing
ASD, DD/ID
Support
The genomic landscape of balanced cytogenetic abnormalities associated with human congenital anomalies.
DD, epilepsy/seizures
Support
Depressive disorder
Anxiety disorder
Support
Targeted Next-Generation Sequencing of Korean Patients With Developmental Delay and/or Intellectual Disability.
DD, ID
Sotos syndrome
Support
DD, ID
Support
De novo variants in neurodevelopmental disorders-experiences from a tertiary care center
DD
Support
Large-scale discovery of novel genetic causes of developmental disorders.
DD, ID, specific learning disability
Support
Integrating de novo and inherited variants in 42
ASD
Support
Targeted sequencing and functional analysis reveal brain-size-related genes and their networks in autism spectrum disorders.
ASD
Support
ID, epilepsy/seizures
Support
Next-Generation Sequencing in Korean Children With Autism Spectrum Disorder and Comorbid Epilepsy
ASD
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Genetic care in geographically isolated small island communities: 8 years of experience in the Dutch Caribbean
DD, ID
Support
Neurogenetic analysis of childhood disintegrative disorder.
Childhood disintegrative disorder
Support
Excess of de novo variants in genes involved in chromatin remodelling in patients with marfanoid habitus and intellectual disability
ID
Marfanoid habitus
Recent Recommendation
Low load for disruptive mutations in autism genes and their biased transmission.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN279R001 
 translocation 
  
  
  
  
  
 GEN279R002 
 stop_gained 
 c.1310C>G 
 p.Ser437Ter 
 De novo 
  
  
 GEN279R003 
 frameshift_variant 
 c.3536del 
 p.Glu1179GlyfsTer40 
 De novo 
  
 Simplex 
 GEN279R004 
 frameshift_variant 
 c.5998insT 
  
 De novo 
  
  
 GEN279R005 
 splice_site_variant 
 G>A 
  
 De novo 
  
  
 GEN279R006 
 copy_number_loss 
  
  
  
  
 Simplex 
 GEN279R007 
 missense_variant 
 c.1811G>T 
 p.Arg604Leu 
  
 Paternal 
  
 GEN279R008 
 missense_variant 
 c.2465C>G 
 p.Ser822Cys 
  
 Maternal 
  
 GEN279R009 
 missense_variant 
 c.4496A>G 
 p.Glu1499Gly 
  
 Paternal 
  
 GEN279R010 
 intron_variant 
 T>C 
  
  
 Paternal 
  
 GEN279R011 
 intron_variant 
 C>G 
  
  
 Maternal 
  
 GEN279R012 
 synonymous_variant 
 c.339C>T 
 p.Cys113= 
 Familial 
 Maternal, Paternal 
 Multiplex 
 GEN279R013 
 synonymous_variant 
 c.2835T>C 
 p.Ser945= 
  
 Maternal 
  
 GEN279R014 
 missense_variant 
 c.2087T>C 
 p.Val696Ala 
 Unknown 
  
 Unknown 
 GEN279R015 
 frameshift_variant 
 c.1292_1293del 
 p.Tyr431Ter 
 De novo 
  
 Simplex 
 GEN279R016 
 missense_variant 
 c.6605G>A 
 p.Cys2202Tyr 
 De novo 
  
 Simplex 
 GEN279R017 
 splice_site_variant 
 c.4379-2A>G 
  
 De novo 
  
 Simplex 
 GEN279R018 
 missense_variant 
 c.4855T>C 
 p.Cys1619Arg 
 De novo 
  
  
 GEN279R019 
 stop_gained 
 c.2323C>T 
 p.Gln775Ter 
 De novo 
  
 Simplex 
 GEN279R020 
 stop_gained 
 c.1492C>T 
 p.Arg498Ter 
 De novo 
  
 Simplex 
 GEN279R021 
 translocation 
  
  
 De novo 
  
  
 GEN279R022 
 stop_gained 
 c.1318C>T 
 p.Arg440Ter 
 De novo 
  
 Simplex 
 GEN279R023 
 frameshift_variant 
 c.1331dup 
 p.Gly445TrpfsTer8 
 De novo 
  
  
 GEN279R024 
 missense_variant 
 c.3697C>T 
 p.Arg1233Trp 
 De novo 
  
 Multiplex (monozygotic twins) 
 GEN279R025 
 missense_variant 
 c.3880C>T 
 p.Pro1294Ser 
 Familial 
  
 Simplex 
 GEN279R026 
 missense_variant 
 c.4648G>A 
 p.Glu1550Lys 
 Familial 
  
 Simplex 
 GEN279R027 
 stop_gained 
 c.2596G>T 
 p.Glu866Ter 
 De novo 
  
  
 GEN279R028 
 frameshift_variant 
 c.708_709del 
 p.Asn238Ter 
 Familial 
 Maternal 
  
 GEN279R029 
 stop_gained 
 c.1026T>A 
 p.Cys342Ter 
 De novo 
  
 Simplex 
 GEN279R030 
 missense_variant 
 c.6436T>C 
 p.Cys2146Arg 
 De novo 
  
 Simplex 
 GEN279R031 
 missense_variant 
 c.1404T>A 
 p.His468Gln 
 De novo 
  
 Simplex 
 GEN279R032 
 missense_variant 
 c.6020T>C 
 p.Ile2007Thr 
 De novo 
  
 Simplex 
 GEN279R033 
 copy_number_variation 
  
  
 De novo 
  
 Simplex 
 GEN279R034 
 frameshift_variant 
 c.6641del 
 p.Met2214SerfsTer95 
 Familial 
 Maternal 
 Multiplex 
 GEN279R035 
 stop_gained 
 c.6349C>T 
 p.Arg2117Ter 
 Unknown 
  
  
 GEN279R036 
 frameshift_variant 
 c.2289_2317dup 
 p.Ala773ValfsTer5 
 De novo 
  
 Unknown 
 GEN279R037 
 splice_site_variant 
 c.4340-2A>G 
 p.? 
 De novo 
  
 Simplex 
 GEN279R038 
 missense_variant 
 c.4411C>G 
 p.Arg1471Gly 
 Familial 
  
 Multiplex 
 GEN279R039 
 stop_gained 
 c.2276C>G 
 p.Ser759Ter 
 De novo 
  
 Simplex 
 GEN279R040 
 missense_variant 
 c.1481G>T 
 p.Cys494Phe 
 Unknown 
  
  
 GEN279R041 
 missense_variant 
 c.6049C>T 
 p.Arg2017Trp 
 Unknown 
  
  
 GEN279R042 
 intron_variant 
 c.6152-14G>A 
  
 De novo 
  
  
 GEN279R043 
 intron_variant 
 c.31-97C>A 
  
 De novo 
  
 Simplex 
 GEN279R044 
 intron_variant 
 c.31-335T>C 
  
 De novo 
  
  
 GEN279R045 
 missense_variant 
 c.340A>G 
 p.Thr114Ala 
 De novo 
  
  
 GEN279R046 
 missense_variant 
 c.1424G>A 
 p.Cys475Tyr 
 De novo 
  
  
 GEN279R047 
 missense_variant 
 c.2219A>G 
 p.His740Arg 
 De novo 
  
  
 GEN279R048 
 synonymous_variant 
 c.6429C>T 
 p.His2143%3D 
 De novo 
  
  
 GEN279R049 
 missense_variant 
 c.3697C>T 
 p.Arg1233Trp 
 De novo 
  
 Multiplex 
 GEN279R050 
 missense_variant 
 c.3140C>G 
 p.Ala1047Gly 
 De novo 
  
  
 GEN279R051 
 stop_gained 
 c.6871C>T 
 p.Gln2291Ter 
 Unknown 
  
  
 GEN279R052 
 frameshift_variant 
 c.7768_7769insT 
 p.Pro2590LeufsTer12 
 Unknown 
  
  
 GEN279R053 
 missense_variant 
 c.5819A>C 
 p.Gln1940Pro 
 Familial 
 Maternal 
  
 GEN279R054 
 missense_variant 
 c.1090T>C 
 p.Tyr364His 
 De novo 
  
  
 GEN279R055 
 missense_variant 
 c.1562A>G 
 p.His521Arg 
 De novo 
  
 Simplex 
 GEN279R056 
 missense_variant 
 c.6119T>C 
 p.Val2040Ala 
 De novo 
  
 Simplex 
 GEN279R057 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN279R058 
 missense_variant 
 c.4786T>C 
 p.Cys1596Arg 
 Unknown 
  
  
 GEN279R059 
 frameshift_variant 
 c.7259_7270delinsGT 
 p.Pro2420ArgfsTer11 
 Unknown 
  
  
 GEN279R060 
 frameshift_variant 
 c.3774delinsCAGCTCACC 
 p.Gln1259SerfsTer53 
 Unknown 
  
 Unknown 
  et al.  
 GEN279R061 
 stop_gained 
 c.5950C>T 
 p.Arg1984Ter 
 De novo 
  
  
  et al.  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
5
Duplication
 1
 
5
Duplication
 1
 
5
Duplication
 1
 
5
Duplication
 1
 
5
Deletion-Duplication
 15
 
5
Duplication
 13
 
5
Deletion-Duplication
 37
 

No Animal Model Data Available


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
AARS alanyl-tRNA synthetase 16 P49588 ChIP
Lucio-Eterovic AK , et al. 2010
AASDH aminoadipate-semialdehyde dehydrogenase 132949 Q4L235 ChIP
Lucio-Eterovic AK , et al. 2010
ABCA12 ATP-binding cassette, sub-family A (ABC1), member 12 26154 Q86UK0 ChIP
Lucio-Eterovic AK , et al. 2010
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 23461 Q8WWZ7 ChIP
Lucio-Eterovic AK , et al. 2010
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 10057 O15440 ChIP
Lucio-Eterovic AK , et al. 2010
AFAP1 actin filament associated protein 1 60312 Q8N556 ChIP
Lucio-Eterovic AK , et al. 2010
AJUBA ajuba LIM protein 84962 Q96IF1 ChIP
Lucio-Eterovic AK , et al. 2010
AKAP3 A kinase (PRKA) anchor protein 3 10566 O75969 ChIP
Lucio-Eterovic AK , et al. 2010
AKAP4 A kinase (PRKA) anchor protein 4 8852 Q5JQC9 ChIP
Lucio-Eterovic AK , et al. 2010
ALDH3A1 aldehyde dehydrogenase 3 family, member A1 218 P30838 ChIP
Lucio-Eterovic AK , et al. 2010
ALDH3B1 aldehyde dehydrogenase 3 family, member B1 221 P43353 ChIP
Lucio-Eterovic AK , et al. 2010
ALLC allantoicase 55821 Q8N6M5 ChIP
Lucio-Eterovic AK , et al. 2010
ALPK2 alpha-kinase 2 115701 Q86TB3 ChIP
Lucio-Eterovic AK , et al. 2010
ANKRD44 ankyrin repeat domain 44 91526 Q8N8A2 ChIP
Lucio-Eterovic AK , et al. 2010
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 323 Q92870 ChIP
Lucio-Eterovic AK , et al. 2010
AR androgen receptor 367 P10275 Y2H; GST
Wang X , et al. 2001
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 10564 Q9Y6D5 ChIP
Lucio-Eterovic AK , et al. 2010
ARFIP2 ADP-ribosylation factor interacting protein 2 23647 P53365 ChIP
Lucio-Eterovic AK , et al. 2010
ARHGEF35 Rho guanine nucleotide exchange factor (GEF) 35 445328 A5YM69 ChIP
Lucio-Eterovic AK , et al. 2010
ATG9B ATG9 autophagy related 9 homolog B (S. cerevisiae) 285973 Q674R7 ChIP
Lucio-Eterovic AK , et al. 2010
ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 498 P25705 ChIP
Lucio-Eterovic AK , et al. 2010
ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) 518 P48201 ChIP
Lucio-Eterovic AK , et al. 2010
AURKB aurora kinase B 9212 Q96GD4 ChIP
Lucio-Eterovic AK , et al. 2010
AVPI1 arginine vasopressin-induced 1 60370 Q5T686 ChIP; ChIP-qPCR
Lucio-Eterovic AK , et al. 2010
B4GALT4 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 8702 O60513 ChIP
Lucio-Eterovic AK , et al. 2010
BARHL2 BarH-like homeobox 2 343472 Q9NY43 ChIP
Lucio-Eterovic AK , et al. 2010
BATF3 basic leucine zipper transcription factor, ATF-like 3 55509 Q9NR55 ChIP
Lucio-Eterovic AK , et al. 2010
BCL2L10 BCL2-like 10 (apoptosis facilitator) 10017 Q9HD36 ChIP
Lucio-Eterovic AK , et al. 2010
BCMO1 beta-carotene 15,15'-monooxygenase 1 53630 Q9HAY6 ChIP
Lucio-Eterovic AK , et al. 2010
BLOC1S2 biogenesis of lysosomal organelles complex-1, subunit 2 282991 Q6QNY1 ChIP; ChIP-qPCR
Lucio-Eterovic AK , et al. 2010
BMP4 bone morphogenetic protein 4 652 P12644 ChIP; ChIP-qPCR
Lucio-Eterovic AK , et al. 2010
BOLA3 bolA homolog 3 (E. coli) 388962 Q53S33 ChIP
Lucio-Eterovic AK , et al. 2010
BRIP1 BRCA1 interacting protein C-terminal helicase 1 83990 Q9BX63 ChIP
Lucio-Eterovic AK , et al. 2010
BTBD1 BTB (POZ) domain containing 1 53339 Q9H0C5 ChIP
Lucio-Eterovic AK , et al. 2010
BTN2A1 butyrophilin, subfamily 2, member A1 11120 Q7KYR7 ChIP
Lucio-Eterovic AK , et al. 2010
C10orf140 chromosome 10 open reading frame 140 387640 Q1XH10 ChIP
Lucio-Eterovic AK , et al. 2010
C12orf57 chromosome 12 open reading frame 57 113246 Q99622 ChIP
Lucio-Eterovic AK , et al. 2010
C15orf38 chromosome 15 open reading frame 38 348110 Q7Z6K5 ChIP
Lucio-Eterovic AK , et al. 2010
C15orf54 chromosome 15 open reading frame 54 400360 Q8N8G6 ChIP
Lucio-Eterovic AK , et al. 2010
C19orf73 chromosome 19 open reading frame 73 55150 Q9NVV2 ChIP
Lucio-Eterovic AK , et al. 2010
C1D C1D nuclear receptor corepressor 10438 Q13901 ChIP
Lucio-Eterovic AK , et al. 2010
C1orf135 chromosome 1 open reading frame 135 79000 Q9H7T9 ChIP
Lucio-Eterovic AK , et al. 2010
C1QL4 complement component 1, q subcomponent-like 4 338761 Q86Z23 ChIP
Lucio-Eterovic AK , et al. 2010
C21orf58 chromosome 21 open reading frame 58 54058 P58505 ChIP
Lucio-Eterovic AK , et al. 2010
C3orf17 chromosome 3 open reading frame 17 25871 Q6NW34 ChIP
Lucio-Eterovic AK , et al. 2010
C3orf32 chromosome 3 open reading frame 32 51066 Q9Y2M2 ChIP
Lucio-Eterovic AK , et al. 2010
C3orf65 chromosome 3 open reading frame 65 646600 Q96M15 ChIP
Lucio-Eterovic AK , et al. 2010
C5orf15 chromosome 5 open reading frame 15 56951 Q8NC54 ChIP
Lucio-Eterovic AK , et al. 2010
C5orf42 chromosome 5 open reading frame 42 65250 Q9H799 ChIP
Lucio-Eterovic AK , et al. 2010
C8orf47 chromosome 8 open reading frame 47 203111 Q6P6B1 ChIP
Lucio-Eterovic AK , et al. 2010
CAMKK1 calcium/calmodulin-dependent protein kinase kinase 1, alpha 84254 Q8N5S9 ChIP
Lucio-Eterovic AK , et al. 2010
CAPN3 calpain 3, (p94) 825 P20807 ChIP
Lucio-Eterovic AK , et al. 2010
CARD14 caspase recruitment domain family, member 14 79092 Q9BXL6 ChIP
Lucio-Eterovic AK , et al. 2010
CBWD1 COBW domain containing 1 55871 Q9BRT8 ChIP
Lucio-Eterovic AK , et al. 2010
CBWD3 COBW domain containing 3 445571 Q5JTY5 ChIP
Lucio-Eterovic AK , et al. 2010
CCDC167 coiled-coil domain containing 167 154467 Q9P0B6 ChIP
Lucio-Eterovic AK , et al. 2010
CCDC50 coiled-coil domain containing 50 152137 Q8IVM0 ChIP
Lucio-Eterovic AK , et al. 2010
CCDC54 coiled-coil domain containing 54 84692 Q8NEL0 ChIP
Lucio-Eterovic AK , et al. 2010
CCDC56 coiled-coil domain containing 56 28958 Q9Y2R0 ChIP
Lucio-Eterovic AK , et al. 2010
CCDC57 coiled-coil domain containing 57 284001 Q2TAC2 ChIP
Lucio-Eterovic AK , et al. 2010
CCDC97 coiled-coil domain containing 97 90324 Q96F63 ChIP
Lucio-Eterovic AK , et al. 2010
CCNB1IP1 cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 57820 Q9NPC3 ChIP
Lucio-Eterovic AK , et al. 2010
CCNE1 cyclin E1 898 P24864 ChIP
Lucio-Eterovic AK , et al. 2010
CCR1 chemokine (C-C motif) receptor 1 1230 P32246 ChIP
Lucio-Eterovic AK , et al. 2010
CD52 CD52 molecule 1043 P31358 ChIP
Lucio-Eterovic AK , et al. 2010
CD6 CD6 molecule 923 P30203 ChIP
Lucio-Eterovic AK , et al. 2010
CDC25C cell division cycle 25 homolog C (S. pombe) 995 P30307 ChIP
Lucio-Eterovic AK , et al. 2010
CDC6 cell division cycle 6 homolog (S. cerevisiae) 990 Q99741 ChIP
Lucio-Eterovic AK , et al. 2010
CDCA4 cell division cycle associated 4 55038 Q9BXL8 ChIP
Lucio-Eterovic AK , et al. 2010
CDK4 cyclin-dependent kinase 4 1019 P11802 ChIP
Lucio-Eterovic AK , et al. 2010
CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 1029 P42771 ChIP
Lucio-Eterovic AK , et al. 2010
CDRT15 CMT1A duplicated region transcript 15 146822 Q96T59 ChIP
Lucio-Eterovic AK , et al. 2010
CETN3 centrin, EF-hand protein, 3 1070 O15182 ChIP
Lucio-Eterovic AK , et al. 2010
CGB chorionic gonadotropin, beta polypeptide 1082 P01233 ChIP
Lucio-Eterovic AK , et al. 2010
CGB1 chorionic gonadotropin, beta polypeptide 1 114335 A6NKQ9 ChIP
Lucio-Eterovic AK , et al. 2010
CGB2 chorionic gonadotropin, beta polypeptide 2 114336 Q6NT52 ChIP
Lucio-Eterovic AK , et al. 2010
CGB8 chorionic gonadotropin, beta polypeptide 8 94115 P01233 ChIP
Lucio-Eterovic AK , et al. 2010
CHD4 chromodomain helicase DNA binding protein 4 1108 Q14839 ChIP
Lucio-Eterovic AK , et al. 2010
CHD8 chromodomain helicase DNA binding protein 8 57680 Q9HCK8 ChIP-chip
Subtil-Rodrguez A , et al. 2013
CHEK1 checkpoint kinase 1 1111 O14757 ChIP
Lucio-Eterovic AK , et al. 2010
CHRNA9 cholinergic receptor, nicotinic, alpha 9 (neuronal) 55584 Q9UGM1 ChIP
Lucio-Eterovic AK , et al. 2010
CNTD1 cyclin N-terminal domain containing 1 124817 Q8N815 ChIP
Lucio-Eterovic AK , et al. 2010
CNTNAP3 contactin associated protein-like 3 79937 Q9BZ76 ChIP
Lucio-Eterovic AK , et al. 2010
COL17A1 collagen, type XVII, alpha 1 1308 Q9UMD9 ChIP
Lucio-Eterovic AK , et al. 2010
COPZ1 coatomer protein complex, subunit zeta 1 22818 P61923 ChIP
Lucio-Eterovic AK , et al. 2010
CPSF7 cleavage and polyadenylation specific factor 7, 59kDa 79869 Q8N684 ChIP
Lucio-Eterovic AK , et al. 2010
CS citrate synthase 1431 O75390 ChIP
Lucio-Eterovic AK , et al. 2010
CTC1 CTS telomere maintenance complex component 1 80169 Q2NKJ3 ChIP
Lucio-Eterovic AK , et al. 2010
CTSD cathepsin D 1509 P07339 ChIP; ChIP-qPCR
Lucio-Eterovic AK , et al. 2010
CWC25 CWC25 spliceosome-associated protein homolog (S. cerevisiae) 54883 Q9NXE8 ChIP
Lucio-Eterovic AK , et al. 2010
CYBASC3 cytochrome b, ascorbate dependent 3 220002 Q8NBI2 ChIP
Lucio-Eterovic AK , et al. 2010
CYP4F12 cytochrome P450, family 4, subfamily F, polypeptide 12 66002 Q9HCS2 ChIP
Lucio-Eterovic AK , et al. 2010
DCTN1 dynactin 1 1639 Q14203 ChIP
Lucio-Eterovic AK , et al. 2010
DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 1663 Q96FC9 ChIP
Lucio-Eterovic AK , et al. 2010
DICER1 dicer 1, ribonuclease type III 23405 Q9UPY3 ChIP
Lucio-Eterovic AK , et al. 2010
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 22982 Q9Y2E4 ChIP
Lucio-Eterovic AK , et al. 2010
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 9229 O14490 ChIP
Lucio-Eterovic AK , et al. 2010
DMWD dystrophia myotonica, WD repeat containing 1762 Q09019 ChIP
Lucio-Eterovic AK , et al. 2010
DNAJB14 DnaJ (Hsp40) homolog, subfamily B, member 14 79982 Q8TBM8 ChIP
Lucio-Eterovic AK , et al. 2010
DNAJB8 DnaJ (Hsp40) homolog, subfamily B, member 8 165721 Q8NHS0 ChIP
Lucio-Eterovic AK , et al. 2010
DNAL4 dynein, axonemal, light chain 4 10126 O96015 ChIP
Lucio-Eterovic AK , et al. 2010
DNASE1L3 deoxyribonuclease I-like 3 1776 Q13609 ChIP
Lucio-Eterovic AK , et al. 2010
DNASE2B deoxyribonuclease II beta 58511 Q8WZ79 ChIP
Lucio-Eterovic AK , et al. 2010
DOK2 docking protein 2, 56kDa 9046 O60496 ChIP
Lucio-Eterovic AK , et al. 2010
DPCR1 diffuse panbronchiolitis critical region 1 135656 Q3MIW9 ChIP
Lucio-Eterovic AK , et al. 2010
DPP8 dipeptidyl-peptidase 8 54878 Q6V1X1 ChIP
Lucio-Eterovic AK , et al. 2010
DST dystonin 667 Q03001 ChIP
Lucio-Eterovic AK , et al. 2010
EDC3 enhancer of mRNA decapping 3 homolog (S. cerevisiae) 80153 Q96F86 ChIP
Lucio-Eterovic AK , et al. 2010
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 80820 Q7L9B9 ChIP
Lucio-Eterovic AK , et al. 2010
EIF3E eukaryotic translation initiation factor 3, subunit E 3646 P60228 ChIP
Lucio-Eterovic AK , et al. 2010
ELL elongation factor RNA polymerase II 8178 P55199 ChIP
Lucio-Eterovic AK , et al. 2010
ENO2 enolase 2 (gamma, neuronal) 2026 P09104 ChIP
Lucio-Eterovic AK , et al. 2010
EPHA1 EPH receptor A1 2041 P21709 ChIP
Lucio-Eterovic AK , et al. 2010
ERCC6 excision repair cross-complementing rodent repair deficiency, complementation group 6 2074 Q03468 ChIP
Lucio-Eterovic AK , et al. 2010
EREG epiregulin 2069 O14944 ChIP
Lucio-Eterovic AK , et al. 2010
ESAM endothelial cell adhesion molecule 90952 Q96AP7 ChIP
Lucio-Eterovic AK , et al. 2010
ETFA electron-transfer-flavoprotein, alpha polypeptide 2108 P13804 ChIP
Lucio-Eterovic AK , et al. 2010
ETV7 ets variant 7 51513 Q9Y603 ChIP
Lucio-Eterovic AK , et al. 2010
FAM131C family with sequence similarity 131, member C 348487 Q96AQ9 ChIP
Lucio-Eterovic AK , et al. 2010
FAM179B family with sequence similarity 179, member B 23116 Q9Y4F4 ChIP
Lucio-Eterovic AK , et al. 2010
FAM195A family with sequence similarity 195, member A 84331 Q9BUT9 ChIP
Lucio-Eterovic AK , et al. 2010
FAM3C family with sequence similarity 3, member C 10447 Q92520 ChIP
Lucio-Eterovic AK , et al. 2010
FAM60A family with sequence similarity 60, member A 58516 Q9NP50 ChIP
Lucio-Eterovic AK , et al. 2010
FAM96A family with sequence similarity 96, member A 84191 Q9H5X1 ChIP
Lucio-Eterovic AK , et al. 2010
FAM96B family with sequence similarity 96, member B 51647 Q9Y3D0 ChIP
Lucio-Eterovic AK , et al. 2010
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) 51024 Q9Y3D6 ChIP
Lucio-Eterovic AK , et al. 2010
FLAD1 FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae) 80308 Q8NFF5 ChIP
Lucio-Eterovic AK , et al. 2010
FMNL3 formin-like 3 91010 Q8IVF7 ChIP
Lucio-Eterovic AK , et al. 2010
FTH1 ferritin, heavy polypeptide 1 2495 P02794 ChIP
Lucio-Eterovic AK , et al. 2010
FUT10 fucosyltransferase 10 (alpha (1,3) fucosyltransferase) 84750 Q6P4F1 ChIP
Lucio-Eterovic AK , et al. 2010
GANC glucosidase, alpha; neutral C 2595 Q8TET4 ChIP
Lucio-Eterovic AK , et al. 2010
GGA3 golgi-associated, gamma adaptin ear containing, ARF binding protein 3 23163 Q9NZ52 ChIP
Lucio-Eterovic AK , et al. 2010
GGH gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) 8836 Q92820 ChIP
Lucio-Eterovic AK , et al. 2010
GNPDA1 glucosamine-6-phosphate deaminase 1 10007 P46926 ChIP
Lucio-Eterovic AK , et al. 2010
GOSR1 golgi SNAP receptor complex member 1 9527 O95249 ChIP
Lucio-Eterovic AK , et al. 2010
GPR101 G protein-coupled receptor 101 83550 Q96P66 ChIP
Lucio-Eterovic AK , et al. 2010
GPR87 G protein-coupled receptor 87 53836 Q9BY21 ChIP
Lucio-Eterovic AK , et al. 2010
GPX1 glutathione peroxidase 1 2876 P07203 ChIP
Lucio-Eterovic AK , et al. 2010
GSTM3 glutathione S-transferase mu 3 (brain) 2947 P21266 ChIP-qPCR; Luciferase reporter assay; EMSA
Chu G , et al. 2014
H2AFX H2A histone family, member X 734746 P06897 Histone lysine methyltransferase (HKMT) assay
Li Y , et al. 2009
H2AFZ H2A histone family, member Z 3015 P0C0S5 ChIP
Lucio-Eterovic AK , et al. 2010
H3F3A H3 histone, family 3A 3020 P84243 in vitro methylation assay
Morishita M , et al. 2014
h3f3a H3 histone, family 3A 399418 Q6PI79 in vitro methylation assay
Yuan G , et al. 2013
HAUS1 HAUS augmin-like complex, subunit 1 115106 Q96CS2 ChIP
Lucio-Eterovic AK , et al. 2010
HBEGF heparin-binding EGF-like growth factor 1839 Q99075 ChIP
Lucio-Eterovic AK , et al. 2010
HECTD3 HECT domain containing E3 ubiquitin protein ligase 3 79654 Q5T447 ChIP
Lucio-Eterovic AK , et al. 2010
HEYL hairy/enhancer-of-split related with YRPW motif-like 26508 Q9NQ87 ChIP
Lucio-Eterovic AK , et al. 2010
HIPK4 homeodomain interacting protein kinase 4 147746 Q8NE63 ChIP
Lucio-Eterovic AK , et al. 2010
HIST1H1E histone cluster 1, H1e 3008 P10412 ChIP
Lucio-Eterovic AK , et al. 2010
HIST1H2BD histone cluster 1, H2bd 3017 P58876 ChIP
Lucio-Eterovic AK , et al. 2010
HIST1H2BJ histone cluster 1, H2bj 446588 P02281 Histone lysine methyltransferase (HKMT) assay
Li Y , et al. 2009
HIST1H4A histone cluster 1, H4a 8359 B2R4R0 in vitro methylation assay
Morishita M , et al. 2014
HIST1H4A histone cluster 1, H4a 447787 P62799 Histone lysine methyltransferase (HKMT) assay
Li Y , et al. 2009
HIST1H4D histone cluster 1, H4d 8360 P62805 ChIP
Lucio-Eterovic AK , et al. 2010
HIST2H3C histone cluster 2, H3c 100049126 P84233 Histone lysine methyltransferase (HKMT) assay
Li Y , et al. 2009
HNF4A hepatocyte nuclear factor 4, alpha 3172 P41235 ChIP
Lucio-Eterovic AK , et al. 2010
HOXC4 homeobox C4 3221 P09017 ChIP
Lucio-Eterovic AK , et al. 2010
HS3ST6 heparan sulfate (glucosamine) 3-O-sulfotransferase 6 64711 Q96QI5 ChIP
Lucio-Eterovic AK , et al. 2010
HSD17B10 hydroxysteroid (17-beta) dehydrogenase 10 3028 Q99714 ChIP
Lucio-Eterovic AK , et al. 2010
HYDIN HYDIN, axonemal central pair apparatus protein 54768 Q4G0P3 ChIP
Lucio-Eterovic AK , et al. 2010
ICT1 immature colon carcinoma transcript 1 3396 Q14197 ChIP
Lucio-Eterovic AK , et al. 2010
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein 3399 Q02535 ChIP
Lucio-Eterovic AK , et al. 2010
IFITM3 interferon induced transmembrane protein 3 10410 Q01628 ChIP
Lucio-Eterovic AK , et al. 2010
IFT20 intraflagellar transport 20 homolog (Chlamydomonas) 90410 Q8IY31 ChIP
Lucio-Eterovic AK , et al. 2010
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 10644 Q9Y6M1 ChIP
Lucio-Eterovic AK , et al. 2010
INCA1 inhibitor of CDK, cyclin A1 interacting protein 1 388324 Q0VD86 ChIP
Lucio-Eterovic AK , et al. 2010
IVNS1ABP influenza virus NS1A binding protein 10625 Q9Y6Y0 ChIP
Lucio-Eterovic AK , et al. 2010
KAZALD1 Kazal-type serine peptidase inhibitor domain 1 81621 Q96I82 ChIP
Lucio-Eterovic AK , et al. 2010
KBTBD4 kelch repeat and BTB (POZ) domain containing 4 55709 Q9NVX7 ChIP
Lucio-Eterovic AK , et al. 2010
KDM5A lysine (K)-specific demethylase 5A 5927 P29375 ChIP
Lucio-Eterovic AK , et al. 2010
KIF1C kinesin family member 1C 10749 O43896 ChIP
Lucio-Eterovic AK , et al. 2010
KIF21B kinesin family member 21B 23046 O75037 ChIP
Lucio-Eterovic AK , et al. 2010
KLF6 Kruppel-like factor 6 1316 Q99612 ChIP; ChIP-qPCR
Lucio-Eterovic AK , et al. 2010
KLHL28 kelch-like 28 (Drosophila) 54813 Q9NXS3 ChIP
Lucio-Eterovic AK , et al. 2010
KLK14 kallikrein-related peptidase 14 43847 Q9P0G3 ChIP
Lucio-Eterovic AK , et al. 2010
KLK6 kallikrein-related peptidase 6 5653 Q92876 ChIP
Lucio-Eterovic AK , et al. 2010
KRT10 keratin 10 3858 P13645 ChIP; ChIP-qPCR
Lucio-Eterovic AK , et al. 2010
KRT13 keratin 13 3860 P13646 ChIP
Lucio-Eterovic AK , et al. 2010
KRT17 keratin 17 3872 Q04695 ChIP
Lucio-Eterovic AK , et al. 2010
KRT18 keratin 18 3875 P05783 ChIP
Lucio-Eterovic AK , et al. 2010
KRT2 keratin 2 3849 P35908 ChIP; ChIP-qPCR
Lucio-Eterovic AK , et al. 2010
KRT23 keratin 23 (histone deacetylase inducible) 25984 Q9C075 ChIP
Lucio-Eterovic AK , et al. 2010
KRT3 keratin 3 3850 P12035 ChIP
Lucio-Eterovic AK , et al. 2010
KRT6A keratin 6A 3853 P02538 ChIP
Lucio-Eterovic AK , et al. 2010
KRT6B keratin 6B 3854 P04259 ChIP
Lucio-Eterovic AK , et al. 2010
KRT6C keratin 6C 286887 P48668 ChIP
Lucio-Eterovic AK , et al. 2010
KRT73 keratin 73 319101 Q86Y46 ChIP
Lucio-Eterovic AK , et al. 2010
KRT75 keratin 75 9119 O95678 ChIP
Lucio-Eterovic AK , et al. 2010
KRT8 keratin 8 3856 P05787 ChIP
Lucio-Eterovic AK , et al. 2010
KRTAP12-1 keratin associated protein 12-1 353332 P59990 ChIP
Lucio-Eterovic AK , et al. 2010
KRTAP4-2 keratin associated protein 4-2 85291 Q9BYR5 ChIP
Lucio-Eterovic AK , et al. 2010
KRTAP4-7 keratin associated protein 4-7 100132476 Q9BYR0 ChIP
Lucio-Eterovic AK , et al. 2010
KRTAP5-1 keratin associated protein 5-1 387264 Q6L8H4 ChIP; ChIP-qPCR
Lucio-Eterovic AK , et al. 2010
KRTAP5-11 keratin associated protein 5-11 440051 Q6L8G4 ChIP
Lucio-Eterovic AK , et al. 2010
KRTAP5-2 keratin associated protein 5-2 440021 Q701N4 ChIP; ChIP-qPCR
Lucio-Eterovic AK , et al. 2010
KRTAP5-3 keratin associated protein 5-3 387266 Q6L8H2 ChIP
Lucio-Eterovic AK , et al. 2010
KRTAP5-4 keratin associated protein 5-4 387267 Q6L8H1 ChIP
Lucio-Eterovic AK , et al. 2010
KRTAP5-7 keratin associated protein 5-7 440050 Q6L8G8 ChIP
Lucio-Eterovic AK , et al. 2010
LACTB2 lactamase, beta 2 51110 Q53H82 ChIP
Lucio-Eterovic AK , et al. 2010
LMAN2L lectin, mannose-binding 2-like 81562 Q9H0V9 ChIP
Lucio-Eterovic AK , et al. 2010
LOC255187 hCG1980447 255187 N/A ChIP
Lucio-Eterovic AK , et al. 2010
LOXL4 lysyl oxidase-like 4 84171 Q96JB6 ChIP
Lucio-Eterovic AK , et al. 2010
LRRC23 leucine rich repeat containing 23 10233 Q53EV4 ChIP
Lucio-Eterovic AK , et al. 2010
LRRK1 leucine-rich repeat kinase 1 79705 Q38SD2 ChIP
Lucio-Eterovic AK , et al. 2010
LYSMD2 LysM, putative peptidoglycan-binding, domain containing 2 256586 Q8IV50 ChIP
Lucio-Eterovic AK , et al. 2010
MAFG v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian) 4097 O15525 ChIP
Lucio-Eterovic AK , et al. 2010
MAP3K12 mitogen-activated protein kinase kinase kinase 12 7786 Q12852 ChIP
Lucio-Eterovic AK , et al. 2010
MB21D2 Mab-21 domain containing 2 151963 Q8IYB1 ChIP
Lucio-Eterovic AK , et al. 2010
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 4199 P48163 ChIP
Lucio-Eterovic AK , et al. 2010
MECP2 methyl CpG binding protein 2 (Rett syndrome) 4204 P51608 IP; LC-MS/MS
Huttlin EL , et al. 2015
MED12L mediator complex subunit 12-like 116931 Q86YW9 ChIP
Lucio-Eterovic AK , et al. 2010
MEIS1 Meis homeobox 1 4211 O00470 ChIP-qPCR; Genome-wide RNAi screen; Gene microarray
Berdasco M , et al. 2009
METTL16 methyltransferase like 16 79066 Q86W50 ChIP
Lucio-Eterovic AK , et al. 2010
MLIP muscular LMNA-interacting protein 90523 Q5VWP3 ChIP
Lucio-Eterovic AK , et al. 2010
MRPS28 mitochondrial ribosomal protein S28 28957 Q9Y2Q9 ChIP
Lucio-Eterovic AK , et al. 2010
MRVI1 murine retrovirus integration site 1 homolog 10335 Q9Y6F6 ChIP
Lucio-Eterovic AK , et al. 2010
MUC20 mucin 20, cell surface associated 200958 Q8N307 ChIP
Lucio-Eterovic AK , et al. 2010
MXI1 MAX interactor 1 4601 P50539 ChIP
Lucio-Eterovic AK , et al. 2010
N6AMT2 N-6 adenine-specific DNA methyltransferase 2 (putative) 221143 Q8WVE0 ChIP
Lucio-Eterovic AK , et al. 2010
NADKD1 NAD kinase domain containing 1 133686 Q4G0N4 ChIP
Lucio-Eterovic AK , et al. 2010
NAMPT nicotinamide phosphoribosyltransferase 10135 P43490 ChIP
Lucio-Eterovic AK , et al. 2010
NBPF11 neuroblastoma breakpoint family, member 11 200030 Q86T75 ChIP
Lucio-Eterovic AK , et al. 2010
NBPF24 neuroblastoma breakpoint family, member 24 728912 Q5RGN0 ChIP
Lucio-Eterovic AK , et al. 2010
NCF2 neutrophil cytosolic factor 2 4688 P19878 ChIP
Lucio-Eterovic AK , et al. 2010
NCK2 NCK adaptor protein 2 8440 O43639 ChIP
Lucio-Eterovic AK , et al. 2010
NCOR2 nuclear receptor corepressor 2 9612 Q9Y618 ChIP
Lucio-Eterovic AK , et al. 2010
NDUFA4L2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2 56901 Q9NRX3 ChIP
Lucio-Eterovic AK , et al. 2010
NDUFS3 NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) 4722 O75489 ChIP
Lucio-Eterovic AK , et al. 2010
NKIRAS1 NFKB inhibitor interacting Ras-like 1 28512 Q9NYS0 ChIP
Lucio-Eterovic AK , et al. 2010
NOSTRIN nitric oxide synthase trafficker 115677 Q8IVI9 ChIP
Lucio-Eterovic AK , et al. 2010
NSD1 nuclear receptor binding SET domain protein 1 64324 Q96L73 X-ray crystallography; ChIP
Qiao Q , et al. 2011
NT5DC3 5'-nucleotidase domain containing 3 51559 Q86UY8 ChIP
Lucio-Eterovic AK , et al. 2010
NUMA1 nuclear mitotic apparatus protein 1 4926 Q14980 ChIP
Lucio-Eterovic AK , et al. 2010
NUPR1 nuclear protein, transcriptional regulator, 1 26471 O60356 ChIP
Lucio-Eterovic AK , et al. 2010
ODAM odontogenic, ameloblast asssociated 54959 A1E959 ChIP
Lucio-Eterovic AK , et al. 2010
OR10J3 olfactory receptor, family 10, subfamily J, member 3 441911 Q5JRS4 ChIP
Lucio-Eterovic AK , et al. 2010
OR10K1 olfactory receptor, family 10, subfamily K, member 1 391109 Q8NGX5 ChIP
Lucio-Eterovic AK , et al. 2010
OR10V1 olfactory receptor, family 10, subfamily V, member 1 390201 Q8NGI7 ChIP
Lucio-Eterovic AK , et al. 2010
OR2D2 olfactory receptor, family 2, subfamily D, member 2 120776 Q9H210 ChIP
Lucio-Eterovic AK , et al. 2010
OR51B4 olfactory receptor, family 51, subfamily B, member 4 79339 Q9Y5P0 ChIP
Lucio-Eterovic AK , et al. 2010
P2RY12 purinergic receptor P2Y, G-protein coupled, 12 64805 Q9H244 ChIP
Lucio-Eterovic AK , et al. 2010
PAFAH2 platelet-activating factor acetylhydrolase 2, 40kDa 5051 Q99487 ChIP
Lucio-Eterovic AK , et al. 2010
PAQR7 progestin and adipoQ receptor family member VII 164091 Q86WK9 ChIP
Lucio-Eterovic AK , et al. 2010
PCDHB8 protocadherin beta 8 56128 Q9UN66 ChIP
Lucio-Eterovic AK , et al. 2010
PCYT1A phosphate cytidylyltransferase 1, choline, alpha 5130 P49585 ChIP
Lucio-Eterovic AK , et al. 2010
PCYT2 phosphate cytidylyltransferase 2, ethanolamine 5833 Q99447 ChIP
Lucio-Eterovic AK , et al. 2010
PDE4DIP phosphodiesterase 4D interacting protein 9659 Q5VU43 ChIP
Lucio-Eterovic AK , et al. 2010
PFAS phosphoribosylformylglycinamidine synthase 5198 O15067 ChIP
Lucio-Eterovic AK , et al. 2010
PGBD3 piggyBac transposable element derived 3 267004 Q8N328 ChIP
Lucio-Eterovic AK , et al. 2010
PIP4K2B phosphatidylinositol-5-phosphate 4-kinase, type II, beta 8396 P78356 ChIP
Lucio-Eterovic AK , et al. 2010
PITHD1 PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1 57095 Q9GZP4 ChIP
Lucio-Eterovic AK , et al. 2010
PITX3 paired-like homeodomain 3 5309 O75364 ChIP
Lucio-Eterovic AK , et al. 2010
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 5430 P24928 IP/WB; Co-localization
Chu G , et al. 2014
PPFIA3 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 8541 O75145 ChIP
Lucio-Eterovic AK , et al. 2010
PPM1G protein phosphatase, Mg2+/Mn2+ dependent, 1G 5496 O15355 ChIP
Lucio-Eterovic AK , et al. 2010
PPP1R10 protein phosphatase 1, regulatory subunit 10 5514 Q96QC0 ChIP
Lucio-Eterovic AK , et al. 2010
PPP2R2C protein phosphatase 2, regulatory subunit B, gamma 5522 Q9Y2T4 ChIP
Lucio-Eterovic AK , et al. 2010
PRKCDBP protein kinase C, delta binding protein 112464 Q969G5 ChIP
Lucio-Eterovic AK , et al. 2010
PROZ protein Z, vitamin K-dependent plasma glycoprotein 8858 P22891 ChIP
Lucio-Eterovic AK , et al. 2010
PRR11 proline rich 11 55771 Q96HE9 ChIP
Lucio-Eterovic AK , et al. 2010
PRSS12 protease, serine, 12 (neurotrypsin, motopsin) 8492 P56730 ChIP
Lucio-Eterovic AK , et al. 2010
PSG11 pregnancy specific beta-1-glycoprotein 11 5680 Q9UQ72 ChIP
Lucio-Eterovic AK , et al. 2010
PSG2 pregnancy specific beta-1-glycoprotein 2 5670 P11465 ChIP
Lucio-Eterovic AK , et al. 2010
PSG4 pregnancy specific beta-1-glycoprotein 4 5672 Q00888 ChIP
Lucio-Eterovic AK , et al. 2010
PSG6 pregnancy specific beta-1-glycoprotein 6 5675 Q00889 ChIP
Lucio-Eterovic AK , et al. 2010
PSG7 pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene) 5676 Q13046 ChIP
Lucio-Eterovic AK , et al. 2010
PTP4A2 protein tyrosine phosphatase type IVA, member 2 8073 Q12974 ChIP
Lucio-Eterovic AK , et al. 2010
PTPRF protein tyrosine phosphatase, receptor type, F 5792 P10586 ChIP
Lucio-Eterovic AK , et al. 2010
RAB3C RAB3C, member RAS oncogene family 115827 Q96E17 ChIP
Lucio-Eterovic AK , et al. 2010
RAD9B RAD9 homolog B (S. pombe) 144715 Q6WBX8 ChIP
Lucio-Eterovic AK , et al. 2010
RAP2C RAP2C, member of RAS oncogene family 57826 Q9Y3L5 ChIP
Lucio-Eterovic AK , et al. 2010
RBKS ribokinase 64080 Q9H477 ChIP
Lucio-Eterovic AK , et al. 2010
RBM17 RNA binding motif protein 17 84991 Q96I25 ChIP
Lucio-Eterovic AK , et al. 2010
RBP1 retinol binding protein 1, cellular 5947 P09455 ChIP
Lucio-Eterovic AK , et al. 2010
RDHE2 short chain dehydrogenase/reductase family 16C, member 5 195814 Q8N3Y7 ChIP
Lucio-Eterovic AK , et al. 2010
RELA v-rel reticuloendotheliosis viral oncogene homolog A (avian) 5970 Q04206 IP/WB
Lu T , et al. 2010
REXO1L1 REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1 254958 Q8IX06 ChIP
Lucio-Eterovic AK , et al. 2010
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 117584 Q8WZ73 ChIP
Lucio-Eterovic AK , et al. 2010
RGS8 regulator of G-protein signaling 8 85397 P57771 ChIP
Lucio-Eterovic AK , et al. 2010
RHOA ras homolog gene family, member A 387 P61586 ChIP
Lucio-Eterovic AK , et al. 2010
RIOK3 RIO kinase 3 (yeast) 8780 O14730 ChIP
Lucio-Eterovic AK , et al. 2010
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) 6041 Q05823 ChIP
Lucio-Eterovic AK , et al. 2010
RNF6 ring finger protein (C3H2C3 type) 6 6049 Q9Y252 ChIP
Lucio-Eterovic AK , et al. 2010
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 9475 O75116 ChIP
Lucio-Eterovic AK , et al. 2010
RORB RAR-related orphan receptor B 6096 Q92753 ChIP
Lucio-Eterovic AK , et al. 2010
RPL36AL ribosomal protein L36a-like 6166 Q969Q0 ChIP
Lucio-Eterovic AK , et al. 2010
RPS29 ribosomal protein S29 6235 P62273 ChIP
Lucio-Eterovic AK , et al. 2010
RRP7A ribosomal RNA processing 7 homolog A (S. cerevisiae) 27341 Q9Y3A4 ChIP
Lucio-Eterovic AK , et al. 2010
S100A2 S100 calcium binding protein A2 6273 P29034 ChIP
Lucio-Eterovic AK , et al. 2010
SDHAF2 succinate dehydrogenase complex assembly factor 2 54949 Q9NX18 ChIP
Lucio-Eterovic AK , et al. 2010
SELP selectin P (granule membrane protein 140kDa, antigen CD62) 6403 P16109 ChIP
Lucio-Eterovic AK , et al. 2010
SEMA6C sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C 10500 Q9H3T2 ChIP
Lucio-Eterovic AK , et al. 2010
SETD3 SET domain containing 3 84193 Q86TU7 ChIP
Lucio-Eterovic AK , et al. 2010
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) 6442 Q16586 ChIP
Lucio-Eterovic AK , et al. 2010
SH3BP5 SH3-domain binding protein 5 (BTK-associated) 9467 O60239 ChIP
Lucio-Eterovic AK , et al. 2010
SH3TC2 SH3 domain and tetratricopeptide repeats 2 79628 Q8TF17 ChIP
Lucio-Eterovic AK , et al. 2010
SHCBP1L SHC SH2-domain binding protein 1-like 81626 Q9BZQ2 ChIP
Lucio-Eterovic AK , et al. 2010
SIN3A SIN3 homolog A, transcription regulator (yeast) 25942 Q96ST3 ChIP
Lucio-Eterovic AK , et al. 2010
SIRT7 sirtuin 7 51547 Q9NRC8 ChIP
Lucio-Eterovic AK , et al. 2010
SKA2 spindle and kinetochore associated complex subunit 2 348235 Q8WVK7 ChIP
Lucio-Eterovic AK , et al. 2010
SLC16A1 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) 6566 P53985 ChIP
Lucio-Eterovic AK , et al. 2010
SLC17A6 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 57084 Q9P2U8 ChIP
Lucio-Eterovic AK , et al. 2010
SLC25A45 solute carrier family 25, member 45 283130 Q8N413 ChIP
Lucio-Eterovic AK , et al. 2010
SLC35F2 solute carrier family 35, member F2 54733 Q8IXU6 ChIP
Lucio-Eterovic AK , et al. 2010
SLC4A1AP solute carrier family 4 (anion exchanger), member 1, adaptor protein 22950 Q9BWU0 ChIP
Lucio-Eterovic AK , et al. 2010
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 8140 Q01650 ChIP
Lucio-Eterovic AK , et al. 2010
SLPI secretory leukocyte peptidase inhibitor 6590 P03973 ChIP
Lucio-Eterovic AK , et al. 2010
SMYD4 SET and MYND domain containing 4 114826 Q8IYR2 ChIP
Lucio-Eterovic AK , et al. 2010
SNX1 sorting nexin 1 6642 Q13596 ChIP
Lucio-Eterovic AK , et al. 2010
SP100 SP100 nuclear antigen 6672 P23497 ChIP
Lucio-Eterovic AK , et al. 2010
SPAG9 sperm associated antigen 9 9043 O60271 ChIP
Lucio-Eterovic AK , et al. 2010
SRFBP1 serum response factor binding protein 1 153443 Q8NEF9 ChIP
Lucio-Eterovic AK , et al. 2010
SRSF7 serine/arginine-rich splicing factor 7 6432 Q16629 ChIP
Lucio-Eterovic AK , et al. 2010
ST6GALNAC4 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 27090 Q9H4F1 ChIP
Lucio-Eterovic AK , et al. 2010
STRA8 stimulated by retinoic acid gene 8 homolog (mouse) 346673 Q7Z7C7 ChIP
Lucio-Eterovic AK , et al. 2010
STRN striatin, calmodulin binding protein 6801 O43815 ChIP
Lucio-Eterovic AK , et al. 2010
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae) 11198 Q9Y5B9 ChIP
Lucio-Eterovic AK , et al. 2010
SUPT7L suppressor of Ty 7 (S. cerevisiae)-like 9913 O94864 ChIP
Lucio-Eterovic AK , et al. 2010
SYNPO synaptopodin 11346 Q8N3V7 ChIP
Lucio-Eterovic AK , et al. 2010
TAS2R7 taste receptor, type 2, member 7 50837 Q9NYW3 ChIP
Lucio-Eterovic AK , et al. 2010
TASP1 taspase, threonine aspartase, 1 55617 Q9H6P5 ChIP
Lucio-Eterovic AK , et al. 2010
TBC1D3 TBC1 domain family, member 3 729873 Q8IZP1 ChIP
Lucio-Eterovic AK , et al. 2010
TBC1D3B TBC1 domain family, member 3B 414059 A6NDS4 ChIP
Lucio-Eterovic AK , et al. 2010
TBX10 T-box 10 347853 O75333 ChIP
Lucio-Eterovic AK , et al. 2010
TESC tescalcin 54997 Q96BS2 ChIP
Lucio-Eterovic AK , et al. 2010
TIGD2 tigger transposable element derived 2 166815 Q4W5G0 ChIP
Lucio-Eterovic AK , et al. 2010
TIMM23 translocase of inner mitochondrial membrane 23 homolog (yeast) 100287932 O14925 ChIP
Lucio-Eterovic AK , et al. 2010
TKT transketolase 7086 P29401 ChIP
Lucio-Eterovic AK , et al. 2010
TM4SF18 transmembrane 4 L six family member 18 116441 Q96CE8 ChIP
Lucio-Eterovic AK , et al. 2010
TM4SF20 transmembrane 4 L six family member 20 79853 Q53R12 ChIP
Lucio-Eterovic AK , et al. 2010
TMCO7 transmembrane and coiled-coil domains 7 79613 Q9C0B7 ChIP
Lucio-Eterovic AK , et al. 2010
TMEM119 transmembrane protein 119 338773 Q4V9L6 ChIP
Lucio-Eterovic AK , et al. 2010
TMEM138 transmembrane protein 138 51524 Q9NPI0 ChIP
Lucio-Eterovic AK , et al. 2010
TMEM173 transmembrane protein 173 340061 Q86WV6 ChIP
Lucio-Eterovic AK , et al. 2010
TMEM59 transmembrane protein 59 9528 Q9BXS4 ChIP
Lucio-Eterovic AK , et al. 2010
TMEM99 transmembrane protein 99 147184 Q8N816 ChIP
Lucio-Eterovic AK , et al. 2010
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 27242 O75509 Y2H; IP/WB; M2H
Mai T , et al. 2004
TNFSF8 tumor necrosis factor (ligand) superfamily, member 8 944 P32971 ChIP
Lucio-Eterovic AK , et al. 2010
TNNT1 troponin T type 1 (skeletal, slow) 7138 P13805 ChIP
Lucio-Eterovic AK , et al. 2010
TNS3 tensin 3 64759 Q68CZ2 ChIP
Lucio-Eterovic AK , et al. 2010
TOP3B topoisomerase (DNA) III beta 8940 O95985 HITS-CLIP
Xu D , et al. 2013
TPD52 tumor protein D52 7163 P55327 ChIP
Lucio-Eterovic AK , et al. 2010
TRIM3 tripartite motif containing 3 10612 O75382 ChIP
Lucio-Eterovic AK , et al. 2010
TRIM7 tripartite motif containing 7 81786 Q9C029 ChIP
Lucio-Eterovic AK , et al. 2010
TRPV6 transient receptor potential cation channel, subfamily V, member 6 55503 Q9H1D0 ChIP
Lucio-Eterovic AK , et al. 2010
TSPEAR thrombospondin-type laminin G domain and EAR repeats 54084 Q8WU66 ChIP
Lucio-Eterovic AK , et al. 2010
UBXN11 UBX domain protein 11 91544 Q5T124 ChIP
Lucio-Eterovic AK , et al. 2010
UQCR11 ubiquinol-cytochrome c reductase, complex III subunit XI 10975 O14957 ChIP
Lucio-Eterovic AK , et al. 2010
VHL von Hippel-Lindau tumor suppressor 7428 P40337 ChIP
Lucio-Eterovic AK , et al. 2010
VIPR2 vasoactive intestinal peptide receptor 2 7434 P41587 ChIP
Lucio-Eterovic AK , et al. 2010
VPS29 vacuolar protein sorting 29 homolog (S. cerevisiae) 51699 Q9UBQ0 ChIP
Lucio-Eterovic AK , et al. 2010
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) 51542 Q9P1Q0 ChIP
Lucio-Eterovic AK , et al. 2010
VSIG2 V-set and immunoglobulin domain containing 2 23584 Q96IQ7 ChIP
Lucio-Eterovic AK , et al. 2010
WBSCR16 Williams-Beuren syndrome chromosome region 16 81554 Q96I51 ChIP
Lucio-Eterovic AK , et al. 2010
WSB2 WD repeat and SOCS box containing 2 55884 Q9NYS7 ChIP
Lucio-Eterovic AK , et al. 2010
WWOX WW domain containing oxidoreductase 51741 Q9NZC7 ChIP
Lucio-Eterovic AK , et al. 2010
XKR9 XK, Kell blood group complex subunit-related family, member 9 389668 Q5GH70 ChIP
Lucio-Eterovic AK , et al. 2010
YBX2 Y box binding protein 2 51087 Q9Y2T7 ChIP
Lucio-Eterovic AK , et al. 2010
ZBTB20 zinc finger and BTB domain containing 20 26137 Q9HC78 ChIP
Lucio-Eterovic AK , et al. 2010
ZBTB44 zinc finger and BTB domain containing 44 29068 Q8NCP5 ChIP
Lucio-Eterovic AK , et al. 2010
ZBTB48 zinc finger and BTB domain containing 48 3104 P10074 IP; LC-MS/MS
Huttlin EL , et al. 2015
ZDHHC11 zinc finger, DHHC-type containing 11 79844 Q9H8X9 ChIP
Lucio-Eterovic AK , et al. 2010
ZDHHC15 zinc finger, DHHC-type containing 15 158866 Q96MV8 ChIP
Lucio-Eterovic AK , et al. 2010
ZFP36L1 zinc finger protein 36, C3H type-like 1 677 Q07352 ChIP; ChIP-qPCR
Lucio-Eterovic AK , et al. 2010
ZFY Zinc finger Y-chromosomal protein 7544 Q24JR0 IP; LC-MS/MS
Huttlin EL , et al. 2015
ZFYVE20 zinc finger, FYVE domain containing 20 64145 Q9H1K0 ChIP
Lucio-Eterovic AK , et al. 2010
ZKSCAN3 zinc finger with KRAB and SCAN domains 3 80317 Q9BRR0 ChIP
Lucio-Eterovic AK , et al. 2010
ZMAT2 zinc finger, matrin-type 2 153527 Q96NC0 ChIP
Lucio-Eterovic AK , et al. 2010
ZMYM3 zinc finger, MYM-type 3 9203 Q14202 ChIP; ChIP-qPCR
Lucio-Eterovic AK , et al. 2010
ZMYND8 zinc finger, MYND-type containing 8 23613 Q9ULU4 ChIP
Lucio-Eterovic AK , et al. 2010
ZNF323 zinc finger protein 323 64288 Q96LW9 ChIP
Lucio-Eterovic AK , et al. 2010
ZNF513 zinc finger protein 513 130557 Q8N8E2 ChIP
Lucio-Eterovic AK , et al. 2010
ZNF692 zinc finger protein 692 55657 Q9BU19 IP; LC-MS/MS
Huttlin EL , et al. 2015
ZNF792 zinc finger protein 792 126375 Q3KQV3 ChIP
Lucio-Eterovic AK , et al. 2010
ESR1 estrogen receptor 1 2099 P03372 GST
Huang N , et al. 1998
FMR1 fragile X mental retardation 1 14265 P35922 HITS-CLIP
Darnell JC , et al. 2011
H3F3A H3 histone, family 3A 3020 P84243 in vitro binding assay
in vitro methylation assay
Rayasam GV , et al. 2003
HIST1H4A histone cluster 1, H4a 8359 B2R4R0 in vitro methylation assay
Rayasam GV , et al. 2003
RARA retinoic acid receptor, alpha 5914 P10276 Y2H; GST
Huang N , et al. 1998
RXRA retinoid X receptor alpha 20181 P28700 GST
Huang N , et al. 1998
THRA thyroid hormone receptor, alpha 396251 P04625 GST
Huang N , et al. 1998
Zkscan17 zinc finger with KRAB and SCAN domains 17 268417 Q5SXI5 in vitro binding assay
Pasillas MP , et al. 2011
ZNF496 zinc finger with KRAB and SCAN domains 17 268417 Q5SXI5 Y2H; IP/WB; GST
Nielsen AL , et al. 2004

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