Summary Statistics:
ASD Reports: 113
Recent Reports: 28
Annotated variants: 361
Associated CNVs: 6
Evidence score: 5
Gene Score: 2
Relevance to Autism
Recurrent mutations in the NRXN1 gene have been identified in individuals with ASD as described below. Numerous studies have demonstrated a statistically significant enrichment of NRXN1 deletions in ASD cases compared to controls [10 in 2195 cases vs. none in 2519 controls (permuted P-value 0.002) in Glessner et al., 2009; 9 in 1771 cases vs. none in 2539 controls (P-value 3.3 E-04) in Bucan et al., 2009; an excess of exonic NRNX1 CNVs in 996 cases compared to 4,964 controls ((P-value 7.7E-4) in Pinto et al., 2010; 7 exonic deletions in 2,588 cases vs. 1 in 2,670 controls (P-value 0.032) in Girirajan et al., 2013]. A similar enrichment of NRXN1 deletions have been repeatedly observed in cohorts composed of cases with a spectrum of neurodevelopmental disorders, including ASD [9 exonic NRXN1 deletions in 3,540 cases vs. 10 in 51,939 controls (P-value 8.9E-07) in Ching et al., 2010; exonic NRXN1 deletions observed in 0.11% of cases compared to 0.02% of controls (P-value 6.08E-07) in Dabell et al., 2013; NRXN1 deletions in 30 cases vs. 9 controls (simulated P-value of 0.00005) in Coe et al., 2014; P<0.0001 in 19,263 cases and 15,264 controls in Lowther et al., 2016]. Multiple studies have also reported point mutations in NRXN1 in individuals with ASD (Feng et al., 17034946; Kim et al., 2008; Yan et al., 2008; Duong et al., 2012; Liu et al., 2012; Camacho-Garcia et al., 2012), including de novo loss-of-function variants in two probands from simplex families (Iossifov et al., 2012; Stessman et al., 2017). Biallelic mutations in NRXN1 have also been implicated in Pitt-Hopkins-like syndrome 2, an autosomal recessive intellectual disability syndrome (Zweier et al., 2009; Harrison et al., 2011). A polymorphism located in the 3' UTR of NRXN1 was found to influence white matter volume and sensorimotor function in a cohort of healthy individuals in Voineskos et al., 2011 (PMID 21687627).
Molecular Function
Neurexins function in the vertebrate nervous system as cell adhesion molecules and receptors. Two neurexin genes are among the largest known in human (NRXN1 and NRXN3). By using alternate promoters, splice sites and exons, predictions of hundreds or even thousands of distinct mRNAs have been made.
References
Primary
High frequency of neurexin 1beta signal peptide structural variants in patients with autism.
ASD
Positive Association
Mutation analysis of the NRXN1 gene in a Chinese autism cohort.
ASD
Positive Association
Deletions of NRXN1 (neurexin-1) predispose to a wide spectrum of developmental disorders.
ASD
Positive Association
Neurexin 1alpha structural variants associated with autism.
ASD
Positive Association
Disruption of neurexin 1 associated with autism spectrum disorder.
ASD
Positive Association
Mapping autism risk loci using genetic linkage and chromosomal rearrangements.
ASD
Support
CNTNAP2 and NRXN1 are mutated in autosomal-recessive Pitt-Hopkins-like mental retardation and determine the level of a common synaptic protein in D...
Pitt-Hopkins-like syndrome 2
ID, epilepsy
Support
De novo genic mutations among a Chinese autism spectrum disorder cohort.
ASD
Support
Identification of candidate intergenic risk loci in autism spectrum disorder.
ASD
Support
Functional characterization of rare NRXN1 variants identified in autism spectrum disorders and schizophrenia
ASD, SCZ
Support
Mutations affecting synaptic levels of neurexin-1 in autism and mental retardation.
ASD
ID
Support
Integrative Analyses of De Novo Mutations Provide Deeper Biological Insights into Autism Spectrum Disorder.
ASD
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Social behavior in prepubertal neurexin 1α deficient rats: A model of neurodevelopmental disorders
ASD
Support
Exon-disrupting deletions of NRXN1 in idiopathic generalized epilepsy.
Epilepsy
ID
Support
Impact of on-site clinical genetics consultations on diagnostic rate in children and young adults with autism spectrum disorder.
ASD
Support
Recurrent CNVs disrupt three candidate genes in schizophrenia patients.
SCZ
Support
Frequency and Complexity of De Novo Structural Mutation in Autism.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Detection of clinically relevant genetic variants in autism spectrum disorder by whole-genome sequencing.
ASD
Support
Genome-wide detection of tandem DNA repeats that are expanded in autism
ASD
Support
Mutations in NRXN1 in a family multiply affected with brain disorders: NRXN1 mutations and brain disorders.
ASD
MR, Epilepsy
Support
Targeted sequencing and functional analysis reveal brain-size-related genes and their networks in autism spectrum disorders.
ASD
Support
Refining analyses of copy number variation identifies specific genes associated with developmental delay.
ASD, DD, ID
Support
Cross-platform validation of neurotransmitter release impairments in schizophrenia patient-derived NRXN1-mutant neurons
SCZ
Support
A discovery resource of rare copy number variations in individuals with autism spectrum disorder.
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Support
Molecular Diagnostic Yield of Chromosomal Microarray Analysis and Whole-Exome Sequencing in Children With Autism Spectrum Disorder.
ASD
Support
Loss of neurexin-1 in Drosophila melanogaster results in altered energy metabolism and increased seizure susceptibility
Support
CNV analysis in Tourette syndrome implicates large genomic rearrangements in COL8A1 and NRXN1.
TS
Support
Further insight into the neurobehavioral pattern of children carrying the 2p16.3 heterozygous deletion involving NRXN1: Report of five new cases
ASD, DD, ID
Epilepsy/seizures
Support
Compound heterozygous deletion of NRXN1 causing severe developmental delay with early onset epilepsy in two sisters.
ID
Epilepsy
Support
Variable phenotype expression in a family segregating microdeletions of the NRXN1 and MBD5 autism spectrum disorder susceptibility genes.
ASD, ADHD, ID
Macrocephaly
Support
Fraternal twins with autism, severe cognitive deficit, and epilepsy: diagnostic role of chromosomal microarray analysis.
Pitt-Hopkins-like syndrome 2
ASD, ID, epilepsy
Support
Diagnostic yield of whole-exome sequencing in non-syndromic intellectual disability
DD, ID
ADHD
Support
2p16.3 microdeletion with partial deletion of the neurexin-1 gene in a female with developmental delays, short stature, and a congenital diaphragma...
DD
Support
Lessons Learned from Large-Scale, First-Tier Clinical Exome Sequencing in a Highly Consanguineous Population.
Pitt-Hopkins-like syndrome 2, DD, ID, epilepsy/sei
Stereotypies
Support
A common cognitive, psychiatric, and dysmorphic phenotype in carriers of NRXN1 deletion.
ID
ASD, BPD, ADHD
Support
Altered medial prefrontal cortex and dorsal raphé activity predict genotype and correlate with abnormal learning behavior in a mouse model of autism-associated 2p16.3 deletion
Support
Molecular and clinical characterization of 25 individuals with exonic deletions of NRXN1 and comprehensive review of the literature.
ID, ASD
Epilepsy
Support
Rare genetic susceptibility variants assessment in autism spectrum disorder: detection rate and practical use.
ASD
Support
Truncating mutations in NRXN2 and NRXN1 in autism spectrum disorders and schizophrenia.
SCZ
ASD, ID
Support
Mutation analysis of the NRXN1 gene in autism spectrum disorders.
ASD
Support
Etiological yield of SNP microarrays in idiopathic intellectual disability.
DD, ID
ASD or autistic features, epilepsy
Support
Comprehensive Genetic Analysis of Non-syndromic Autism Spectrum Disorder in Clinical Settings
ASD
Support
Rate of de novo mutations and the importance of father's age to disease risk.
ASD, SCZ
Support
Whole genome paired-end sequencing elucidates functional and phenotypic consequences of balanced chromosomal rearrangement in patients with develop...
ID
Behavioral abnormalities
Support
Large-scale discovery of novel genetic causes of developmental disorders.
DD
Hypotonia
Support
Autism spectrum disorder and comorbid neurodevelopmental disorders (ASD-NDDs): Clinical and genetic profile of a pediatric cohort
ASD
Epilepsy/seizures
Support
Identification of rare copy number variants in high burden schizophrenia families.
SCZ
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
Functional impact of global rare copy number variation in autism spectrum disorders.
ASD
Support
Targeted sequencing identifies 91 neurodevelopmental-disorder risk genes with autism and developmental-disability biases.
ASD
Support
DD, ID
Autistic features
Support
A survey of rare coding variants in candidate genes in schizophrenia by deep sequencing.
SCZ
Support
An increased burden of rare exonic variants in NRXN1 microdeletion carriers is likely to enhance the penetrance for autism spectrum disorder
ASD
DD
Support
Missense mutation in the ATPase, aminophospholipid transporter protein ATP8A2 is associated with cerebellar atrophy and quadrupedal locomotion.
ASD
Support
Both rare and common genetic variants contribute to autism in the Faroe Islands.
ASD
Support
A boy with dysmorphic features, intellectual disability, and biallelic homozygous deletion in NRXN1.
ID
Support
NRXN1α +/- is associated with increased excitability in ASD iPSC-derived neurons
ASD
Support
Investigation of NRXN1 deletions: clinical and molecular characterization.
DD, ID
ASD, ADHD, Epilepsy
Support
The clinical relevance of intragenic NRXN1 deletions.
Support
Intragenic rearrangements in NRXN1 in three families with autism spectrum disorder, developmental delay, and speech delay.
ASD
Support
The genomic landscape of balanced cytogenetic abnormalities associated with human congenital anomalies.
DD
Support
Genome-wide rare variant score associates with morphological subtypes of autism spectrum disorder
ASD
Support
Performance comparison of bench-top next generation sequencers using microdroplet PCR-based enrichment for targeted sequencing in patients with aut...
ASD
ID, epilepsy
Support
Large-scale targeted sequencing identifies risk genes for neurodevelopmental disorders
ASD, DD
ID
Support
De novo gene disruptions in children on the autistic spectrum.
ASD
Support
Inherited and multiple de novo mutations in autism/developmental delay risk genes suggest a multifactorial model.
ASD
Support
Recurrent de novo mutations implicate novel genes underlying simplex autism risk.
ASD
Support
Rare NRXN1 missense variants identified in autism interfered protein degradation and Drosophila sleeping
ASD
Support
Refinement and discovery of new hotspots of copy-number variation associated with autism spectrum disorder.
ASD
Support
Increased Ca2+ signaling in NRXN1 +/- neurons derived from ASD induced pluripotent stem cells.
ASD
Highly Cited
Neurexin mediates the assembly of presynaptic terminals.
Highly Cited
Binding properties of neuroligin 1 and neurexin 1beta reveal function as heterophilic cell adhesion molecules.
Recent Recommendation
Functional impacts of NRXN1 knockdown on neurodevelopment in stem cell models.
Recent Recommendation
Presynaptic targeting of alpha4beta 2 nicotinic acetylcholine receptors is regulated by neurexin-1beta.
Recent Recommendation
A Statistical Framework for Mapping Risk Genes from De Novo Mutations in Whole-Genome-Sequencing Studies.
ASD
Recent Recommendation
Direct measure of the de novo mutation rate in autism and schizophrenia cohorts.
SCZ
Recent Recommendation
Neurexin regulates visual function via mediating retinoid transport to promote rhodopsin maturation.
Recent Recommendation
Disruption of the neurexin 1 gene is associated with schizophrenia.
SCZ
Recent Recommendation
Rare Copy Number Variants in NRXN1 and CNTN6 Increase Risk for Tourette Syndrome.
Tourette syndrome
Recent Recommendation
Splice form dependence of beta-neurexin/neuroligin binding interactions.
Recent Recommendation
Neuroligin-1 induces neurite outgrowth through interaction with neurexin-1 and activation of fibroblast growth factor receptor-1.
Recent Recommendation
A patient with vertebral, cognitive and behavioural abnormalities and a de novo deletion of NRXN1alpha.
ID
Recent Recommendation
Molecular characterization of NRXN1 deletions from 19,263 clinical microarray cases identifies exons important for neurodevelopmental disease expre...
DD, ID, ASD
Recent Recommendation
Trans-synaptic interaction of GluRdelta2 and Neurexin through Cbln1 mediates synapse formation in the cerebellum.
Recent Recommendation
Phenotypic spectrum and genotype-phenotype correlations of NRXN1 exon deletions.
ASD, ID
ADHD, epilepsy
Recent Recommendation
Silencing of neuroligin function by postsynaptic neurexins.
Recent Recommendation
Low load for disruptive mutations in autism genes and their biased transmission.
ASD
Recent Recommendation
Neurexins physically and functionally interact with GABA(A) receptors.
Recent Recommendation
Neuronal impact of patient-specific aberrant NRXN1 splicing.
Recent Recommendation
Expanding the clinical spectrum associated with defects in CNTNAP2 and NRXN1.
ID
Recent Recommendation
Retrograde modulation of presynaptic release probability through signaling mediated by PSD-95-neuroligin.
Recent Recommendation
Neurexin 1 (NRXN1) splice isoform expression during human neocortical development and aging.
Recent Recommendation
Sensory regulation of neuroligins and neurexin I in the honeybee brain.
Recent Recommendation
Phenotypic spectrum of NRXN1 mono- and bi-allelic deficiency: A systematic review.
Pitt-Hopkins-like syndrome 2
Recent Recommendation
Neurexin-1 and frontal lobe white matter: an overlapping intermediate phenotype for schizophrenia and autism spectrum disorders.
ASD
SCZ
Recent Recommendation
Alternative splicing controls selective trans-synaptic interactions of the neuroligin-neurexin complex.
Recent Recommendation
Targeted combinatorial alternative splicing generates brain region-specific repertoires of neurexins.
Recent Recommendation
Mouse neurexin-1alpha deletion causes correlated electrophysiological and behavioral changes consistent with cognitive impairments.
ASD
Recent Recommendation
NRXN1 deletion syndrome; phenotypic and penetrance data from 34 families.
DD, ID
ASD, epilepsy/seizures
Recent Recommendation
Modeling the functional genomics of autism using human neurons.
GEN179R001
missense_variant
c.41C>T
p.Ser14Leu
Familial
Paternal
Multiplex
GEN179R002
missense_variant
c.41C>T
p.Ser14Leu
GEN179R003
missense_variant
c.118T>A
p.Trp40Arg
Familial
Maternal
Simplex
GEN179R004
missense_variant
c.53T>A
p.Leu18Gln
GEN179R005
synonymous_variant
c.105C>A
p.Gly35=
GEN179R006
synonymous_variant
c.912C>T
p.Gly304=
GEN179R007
missense_variant
c.2242C>A
p.Leu748Ile
GEN179R008
synonymous_variant
c.3165C>T
p.Ala1055=
GEN179R009
synonymous_variant
c.3975C>T
p.Gly1325=
GEN179R010
synonymous_variant
c.4374A>G
p.Pro1458=
GEN179R011a
copy_number_loss
Familial
Maternal
Simplex
GEN179R011b
stop_gained
c.2936C>G
p.Ser979Ter
Familial
Paternal
Simplex
GEN179R012
copy_number_loss
Unknown
Not maternal
Simplex
GEN179R013
copy_number_loss
De novo
Simplex
GEN179R014
copy_number_loss
Familial
Paternal
Simplex
GEN179R015
copy_number_loss
Familial
Paternal
Simplex
GEN179R016
copy_number_loss
De novo
Simplex
GEN179R017
copy_number_loss
Familial
Maternal
Simplex
GEN179R018
copy_number_loss
Familial
Paternal
Simplex
GEN179R019
copy_number_loss
De novo
Simplex
GEN179R020
copy_number_loss
Unknown
Simplex
GEN179R021
copy_number_loss
De novo
Simplex
GEN179R022
copy_number_loss
Familial
Maternal
Simplex
GEN179R023
copy_number_loss
Familial
Maternal
Simplex
GEN179R024
missense_variant
c.23G>C
p.Arg8Pro
Unknown
Unknown
GEN179R025
missense_variant
c.37C>T
p.Leu13Phe
Unknown
Unknown
GEN179R026
splice_site_variant
c.1025C>T
p.Thr342Ile
Unknown
Unknown
GEN179R027
missense_variant
c.83G>C
p.Gly28Ala
Unknown
Unknown
GEN179R028
missense_variant
c.1994C>T
p.Thr665Ile
Unknown
Unknown
GEN179R029
missense_variant
c.2143G>A
p.Glu715Lys
Unknown
Unknown
GEN179R030
copy_number_loss
De novo
Multiplex
GEN179R031
copy_number_loss
De novo
GEN179R032
copy_number_loss
GEN179R033
copy_number_loss
GEN179R034
copy_number_loss
GEN179R035
copy_number_loss
GEN179R036
copy_number_loss
GEN179R037
copy_number_loss
GEN179R038
copy_number_loss
GEN179R039
copy_number_loss
GEN179R040
copy_number_loss
GEN179R041
copy_number_loss
GEN179R042
copy_number_loss
GEN179R043
copy_number_loss
GEN179R044
copy_number_loss
GEN179R045
copy_number_loss
GEN179R046
copy_number_loss
Familial
Paternal
GEN179R047
copy_number_loss
Familial
Maternal
GEN179R048
copy_number_loss
Familial
Maternal
GEN179R049
copy_number_loss
Familial
Paternal
GEN179R050
copy_number_loss
Familial
Paternal
GEN179R051
copy_number_loss
De novo
GEN179R052
copy_number_loss
Familial
Maternal
Simplex
GEN179R053
splice_site_variant
c.2879C>T
p.Thr960Ile
Familial
Paternal
Multiplex
GEN179R054
copy_number_gain
De novo
Simplex
GEN179R055
copy_number_loss
De novo
Unknown
GEN179R056
copy_number_loss
De novo
Unknown
GEN179R057
copy_number_loss
De novo
Unknown
GEN179R058
copy_number_loss
Familial
Paternal
GEN179R059
copy_number_loss
Familial
Maternal
GEN179R060
copy_number_loss
Familial
Maternal
GEN179R061
copy_number_loss
Familial
Maternal
GEN179R062
5_prime_UTR_variant
c.-3G>T
Familial
GEN179R063
initiator_codon_variant
c.3G>T
p.Met1?
Familial
GEN179R064
missense_variant
c.1124G>A
p.Arg375Gln
Familial
Maternal
Multiplex
GEN179R065
missense_variant
c.1132G>A
p.Gly378Ser
Familial
Maternal
Simplex
GEN179R066
stop_gained
c.2865T>A
p.Tyr955Ter
De novo
Simplex
GEN179R067
copy_number_loss
De novo
GEN179R068
copy_number_loss
Unknown
GEN179R069
copy_number_loss
De novo
GEN179R070
copy_number_loss
Familial
Paternal
GEN179R071
copy_number_loss
Familial
Maternal
GEN179R072
copy_number_loss
De novo
GEN179R073
copy_number_loss
Familial
Maternal
GEN179R074
copy_number_loss
Unknown
GEN179R075
copy_number_loss
Unknown
GEN179R076
copy_number_loss
Familial
Maternal
GEN179R077
copy_number_loss
Familial
Maternal
Multiplex
GEN179R078
copy_number_loss
Familial
Paternal
GEN179R079
copy_number_loss
Familial
Maternal
GEN179R080
copy_number_loss
Familial
Maternal
GEN179R081
copy_number_loss
Familial
Paternal
Multiplex
GEN179R082
copy_number_loss
Unknown
Not maternal
GEN179R083
copy_number_loss
Familial
Maternal
GEN179R084
copy_number_loss
Familial
Paternal
GEN179R085
copy_number_loss
Familial
Paternal
GEN179R086
copy_number_loss
Familial
Paternal
GEN179R087
copy_number_loss
Familial
Maternal
GEN179R088
copy_number_loss
Familial
Paternal
GEN179R089
synonymous_variant
c.705C>G
p.Ser235=
Unknown
GEN179R090
missense_variant
c.844A>G
p.Ile282Val
Familial
Maternal
GEN179R091
missense_variant
c.2677C>G
p.Leu893Val
Familial
Paternal
GEN179R092
missense_variant
c.3403A>G
p.Ile1135Val
Familial
Paternal
GEN179R093
synonymous_variant
c.81A>G
p.(=)
Unknown
GEN179R094
synonymous_variant
c.132C>T
p.Pro44=
Unknown
GEN179R095
missense_variant
c.83G>C
p.Gly28Ala
Unknown
GEN179R096
copy_number_loss
Familial
Maternal
Multiplex
GEN179R097
copy_number_gain
Familial
Maternal
Multiplex
GEN179R098
copy_number_gain
Unknown
Not maternal
Simplex
GEN179R099
frameshift_variant
ins(ACGG)
p.Gly1402AspfsTer29
De novo
GEN179R100
stop_gained
c.337C>T
p.Arg113Ter
De novo
GEN179R101
frameshift_variant
c.4146_4147insGTCC
p.Met1383ValfsTer20
De novo
GEN179R102
copy_number_loss
Familial
Maternal
Multiplex
GEN179R103
copy_number_loss
Familial
Paternal
Multiplex
GEN179R104
copy_number_loss
Familial
Paternal
Simplex
GEN179R105
copy_number_loss
Familial
Maternal
Unknown
GEN179R106
copy_number_loss
Familial
Maternal
Unknown
GEN179R107
copy_number_loss
Familial
Paternal
Unknown
GEN179R108
copy_number_loss
Familial
Paternal
Unknown
GEN179R109
copy_number_loss
Unknown
Unknown
GEN179R110
copy_number_loss
Unknown
Unknown
GEN179R111
copy_number_loss
Unknown
Unknown
GEN179R112
copy_number_loss
Familial
Maternal
Multiplex
GEN179R113
copy_number_loss
Familial
Paternal
Multiplex
GEN179R114
copy_number_loss
Familial
Paternal
Simplex
GEN179R115
copy_number_loss
De novo
Multiplex
GEN179R116
copy_number_loss
De novo
Multiplex
GEN179R117
copy_number_loss
De novo
Simplex
GEN179R118
copy_number_loss
Familial
Maternal
Multiplex
GEN179R119
copy_number_loss
Familial
Maternal
Multiplex
GEN179R120
copy_number_loss
Familial
Maternal
Simplex
GEN179R121
copy_number_loss
Familial
Paternal
Simplex
GEN179R122
copy_number_loss
Familial
Paternal
Simplex
GEN179R123
copy_number_loss
De novo
Simplex
GEN179R124
copy_number_loss
Unknown
GEN179R125
copy_number_loss
Familial
Parental
Simplex
GEN179R126
copy_number_loss
De novo
Simplex
GEN179R127
copy_number_loss
De novo
Multi-generational
GEN179R128
copy_number_loss
De novo
GEN179R129
copy_number_loss
Apparently de novo
GEN179R130
copy_number_loss
De novo
GEN179R131
copy_number_loss
Unknown
Not maternal
GEN179R132
copy_number_loss
Familial
Maternal
Simplex
GEN179R133
copy_number_loss
Unknown
GEN179R134
copy_number_loss
Familial
Maternal
Simplex
GEN179R135
copy_number_loss
Unknown
GEN179R136
copy_number_loss
Familial
Maternal
Simplex
GEN179R137
copy_number_loss
Apparently de novo
GEN179R138
copy_number_loss
Unknown
GEN179R139
copy_number_loss
Familial
Paternal
Simplex
GEN179R140
copy_number_loss
Unknown
GEN179R141
copy_number_loss
Unknown
Not maternal
Multiplex
GEN179R142
copy_number_loss
Familial
Maternal
GEN179R143
copy_number_loss
De novo
GEN179R144
copy_number_loss
Unknown
Not maternal
GEN179R145a
copy_number_loss
Familial
Maternal or paternal
Simplex
GEN179R145b
copy_number_loss
Familial
Paternal or maternal
Simplex
GEN179R146
copy_number_loss
De novo
GEN179R147
copy_number_loss
Familial
Maternal
Simplex
GEN179R148
copy_number_loss
Unknown
GEN179R149
copy_number_loss
Familial
Paternal
GEN179R150
copy_number_loss
Familial
Paternal
Multiplex
GEN179R151
copy_number_loss
Familial
Maternal
Multiplex
GEN179R152
copy_number_loss
GEN179R153
copy_number_loss
GEN179R154
copy_number_gain
GEN179R155
copy_number_loss
GEN179R156
copy_number_loss
GEN179R157
copy_number_loss
De novo
GEN179R158
copy_number_loss
Unknown
GEN179R159
copy_number_loss
Unknown
GEN179R160
copy_number_loss
Familial
Paternal
GEN179R161
copy_number_loss
Familial
Maternal
Multiplex
GEN179R162
copy_number_loss
Familial
Paternal
GEN179R163
copy_number_loss
Unknown
GEN179R164
copy_number_loss
Unknown
GEN179R165
copy_number_loss
De novo
GEN179R166
copy_number_loss
Unknown
GEN179R167
copy_number_loss
Familial
Paternal
GEN179R168
copy_number_loss
Familial
Maternal
GEN179R169
copy_number_loss
Unknown
GEN179R170
copy_number_loss
Familial
Paternal
GEN179R171
copy_number_loss
Unknown
GEN179R172
copy_number_loss
Unknown
GEN179R173
copy_number_loss
Unknown
GEN179R174
copy_number_loss
Unknown
GEN179R175
copy_number_loss
Unknown
GEN179R176
copy_number_loss
Unknown
GEN179R177
copy_number_loss
Familial
Paternal
GEN179R178
copy_number_loss
Unknown
GEN179R179
copy_number_loss
Familial
Paternal
GEN179R180
copy_number_loss
Unknown
GEN179R181
copy_number_loss
De novo
GEN179R182
copy_number_loss
Unknown
GEN179R183
copy_number_loss
Unknown
GEN179R184
copy_number_loss
De novo
Multiplex
GEN179R185
copy_number_loss
Familial
Maternal
GEN179R186
copy_number_loss
Unknown
GEN179R187
copy_number_loss
Unknown
GEN179R188
copy_number_loss
Unknown
GEN179R189
copy_number_loss
Unknown
Multiplex
GEN179R190
copy_number_loss
Unknown
Multiplex
GEN179R191
copy_number_loss
Unknown
GEN179R192
copy_number_loss
Familial
Paternal
GEN179R193
copy_number_loss
Unknown
GEN179R194
missense_variant
c.2653C>T
p.His885Tyr
Familial
Paternal
Multiplex
GEN179R195
copy_number_loss
Familial
Maternal
Multiplex
GEN179R196
copy_number_loss
Unknown
Simplex
GEN179R197
copy_number_loss
Unknown
Simplex
GEN179R198
copy_number_loss
Unknown
Simplex
GEN179R199
copy_number_gain
Familial
Paternal
Simplex
GEN179R200
copy_number_loss
Familial
Paternal
Simplex
GEN179R201
missense_variant
c.455G>A
p.Gly152Asp
Unknown
Unknown
GEN179R202
stop_gained
c.972C>G
p.Tyr324Ter
Unknown
Unknown
GEN179R203
stop_gained
c.607A>T
p.Lys203Ter
Unknown
Unknown
GEN179R204a
copy_number_loss
Familial
Both parents
Simplex
GEN179R205a
copy_number_loss
Unknown
Multiplex
GEN179R205b
copy_number_loss
Unknown
Multiplex
GEN179R206
copy_number_loss
4 de novo, 8 inherited, 18 unknown
Unknown
GEN179R207
missense_variant
c.3763G>A
p.Val1255Ile
De novo
Simplex
GEN179R208
missense_variant
c.1174A>C
p.Asn392His
De novo
Simplex
GEN179R209
missense_variant
c.308C>T
p.Thr103Ile
Familial
Paternal
Simplex
GEN179R210
missense_variant
c.1945C>T
p.Leu649=
Familial
Maternal
Simplex
GEN179R211
missense_variant
c.1691A>G
p.Arg564Gly
Familial
Paternal
Multiplex
GEN179R212
frameshift_variant
c.2489del
p.Asn830IlefsTer25
Unknown
Unknown
GEN179R213
missense_variant
c.2804T>G
p.Leu935Arg
Unknown
Unknown
GEN179R214
missense_variant
c.2166G>T
p.Gln722His
Unknown
Unknown
GEN179R215
missense_variant
c.859A>C
p.Lys287Gln
Unknown
Unknown
GEN179R216
missense_variant
c.302C>T
p.Ala101Val
Unknown
Unknown
GEN179R217
missense_variant
c.2884C>G
p.Gln962Glu
Unknown
Unknown
GEN179R218
missense_variant
c.2725C>A
p.Leu909Met
Unknown
Unknown
GEN179R219a
copy_number_loss
Familial
Both parents
Simplex
GEN179R220
missense_variant
c.2437C>T
p.Arg813Cys
Familial
Paternal
Simplex
GEN179R221
copy_number_loss
De novo
Simplex
GEN179R222
copy_number_loss
Familial
Maternal
Multiplex
GEN179R223
copy_number_loss
Familial
Maternal
Extended multiplex
GEN179R224
copy_number_loss
De novo
GEN179R225
copy_number_loss
Familial
Maternal
Multiplex
GEN179R226
frameshift_variant
c.3018del
p.Phe1006LeufsTer26
Familial
Maternal
GEN179R227
missense_variant
c.2785G>A
p.Asp929Asn
Familial
Maternal
GEN179R228
missense_variant
c.3308C>T
p.Pro1103Leu
Familial
Maternal
GEN179R229
missense_variant
c.2573G>A
p.Gly858Glu
Familial
Maternal
GEN179R230
missense_variant
c.2785G>A
p.Asp929Asn
Familial
Paternal
GEN179R231
copy_number_gain
De novo
GEN179R232
complex_structural_alteration
Familial
Paternal
Simplex
GEN179R233
frameshift_variant
c.4166del
p.Thr1389AsnfsTer57
De novo
Simplex
GEN179R234
missense_variant
c.41C>T
p.Ser14Leu
Familial
Paternal
Simplex
GEN179R235
missense_variant
c.2242C>A
p.Leu748Ile
Familial
Paternal
Simplex
GEN179R236
copy_number_loss
Familial
Paternal
Simplex
GEN179R237
missense_variant
c.2110G>A
p.Gly704Arg
Familial
Simplex
GEN179R238
missense_variant
c.3333G>A
p.Met1111Ile
Familial
Simplex
GEN179R239
missense_variant
c.64G>C
p.Gly22Arg
De novo
Simplex
GEN179R240
loss_of_function_variant
De novo
GEN179R241
missense_variant
De novo
GEN179R242
splicing_variant
De novo
GEN179R243
copy_number_loss
Unknown
GEN179R244
copy_number_loss
De novo
GEN179R245
copy_number_loss
Familial
Maternal
Extended multiplex
GEN179R246
copy_number_loss
De novo
GEN179R247
copy_number_loss
De novo
GEN179R248
copy_number_loss
De novo
GEN179R249
copy_number_loss
Familial
Maternal
Simplex
GEN179R250
copy_number_loss
Familial
Paternal
GEN179R251
copy_number_loss
Familial
Maternal
GEN179R252
copy_number_loss
Unknown
GEN179R253
copy_number_loss
Familial
Maternal
GEN179R254
copy_number_loss
Familial
Paternal
Simplex
GEN179R255
copy_number_loss
Familial
Paternal
GEN179R256
copy_number_loss
De novo
GEN179R257
copy_number_loss
Familial
Paternal
GEN179R258
copy_number_loss
Familial
Maternal
GEN179R259
copy_number_loss
Familial
Paternal
Simplex
GEN179R260
copy_number_loss
Unknown
GEN179R261
copy_number_loss
Familial
Maternal
GEN179R262
copy_number_loss
Familial
Maternal
GEN179R263
copy_number_loss
Familial
Paternal
GEN179R264
copy_number_loss
Familial
Maternal
GEN179R265
copy_number_loss
Familial
Paternal
GEN179R266
copy_number_loss
De novo
GEN179R267
copy_number_loss
De novo
GEN179R268
copy_number_loss
Familial
Paternal
GEN179R269
copy_number_loss
Familial
Paternal
Simplex
GEN179R270
copy_number_loss
De novo
GEN179R271
copy_number_loss
De novo
GEN179R272
copy_number_loss
Unknown
GEN179R273
copy_number_loss
Familial
Paternal
GEN179R274
copy_number_loss
De novo
GEN179R275
missense_variant
c.2558G>A
p.Arg853His
De novo
Simplex
GEN179R276
missense_variant
c.2354G>A
p.Arg785Gln
Familial
Maternal
Simplex
GEN179R277
copy_number_loss
De novo
Simplex
GEN179R278
translocation
De novo
GEN179R279
copy_number_loss
Unknown
GEN179R280
copy_number_loss
Familial
Paternal
GEN179R281
stop_gained
c.1540G>T
p.Glu514Ter
Familial
Paternal
Multiplex
GEN179R282a
missense_variant
c.28G>A
p.Gly10Ser
Both parents
Multiplex
GEN179R283
stop_gained
c.664G>T
p.Glu222Ter
De novo
Simplex
GEN179R284
frameshift_variant
c.4311del
p.Cys1438ValfsTer8
De novo
Simplex
GEN179R285
intron_variant
c.3485-11T>C
De novo
Simplex
GEN179R286
copy_number_loss
Familial
Paternal
Not simplex
GEN179R287
copy_number_loss
De novo
Simplex
GEN179R288
copy_number_loss
Familial
Paternal
Simplex
GEN179R289
frameshift_variant
c.471dup
p.Leu158AlafsTer29
De novo
Simplex
GEN179R290
frameshift_variant
c.1285del
p.Ile429TyrfsTer60
Familial
Maternal
Simplex
GEN179R291
copy_number_loss
Familial
Maternal
GEN179R292
copy_number_loss
Familial
Maternal
GEN179R293
copy_number_loss
Familial
Maternal
GEN179R294
copy_number_loss
Familial
Paternal
GEN179R295
copy_number_loss
De novo
GEN179R296
minisatellite
Unknown
Simplex
GEN179R297
missense_variant
c.3640G>A
p.Val1214Ile
Unknown
Unknown
GEN179R298
missense_variant
c.3715G>A
p.Ala1239Thr
Unknown
Unknown
GEN179R299
missense_variant
c.3595G>A
p.Ala1199Thr
Unknown
Unknown
GEN179R300
missense_variant
c.3595G>A
p.Ala1199Thr
Unknown
Unknown
GEN179R301
missense_variant
c.3490G>A
p.Val1164Ile
Unknown
Unknown
GEN179R302
missense_variant
c.2566C>T
p.Arg856Trp
Familial
Maternal
Simplex
GEN179R303
missense_variant
c.2315A>G
p.Asp772Gly
Familial
Maternal
Simplex
GEN179R304
missense_variant
c.2210C>T
p.Thr737Met
Familial
Maternal
Simplex
GEN179R305
missense_variant
c.2210C>T
p.Thr737Met
Unknown
Unknown
GEN179R306
missense_variant
c.1851T>G
p.His617Gln
De novo
GEN179R307
missense_variant
c.1558G>C
p.Asp520His
De novo
GEN179R308
frameshift_variant
c.2439_2446delinsC
p.Gly814Ter
Unknown
GEN179R309
stop_gained
c.4509C>G
p.Tyr1503Ter
Unknown
GEN179R310
stop_gained
c.4509C>G
p.Tyr1503Ter
Unknown
Simplex
GEN179R311
splice_site_variant
c.1879+1G>A
Unknown
GEN179R312
splice_site_variant
c.3484+1G>A
Unknown
GEN179R313
missense_variant
c.2959G>A
p.Gly987Arg
Unknown
GEN179R314
missense_variant
c.2566C>T
p.Arg856Trp
Unknown
GEN179R315
missense_variant
c.2566C>T
p.Arg856Trp
Unknown
GEN179R316
missense_variant
c.4438G>A
p.Ala1480Thr
Unknown
GEN179R317
missense_variant
c.2618G>A
p.Gly873Asp
Unknown
GEN179R318
missense_variant
c.2618G>A
p.Gly873Asp
Unknown
GEN179R319
missense_variant
c.3572G>T
p.Arg1191Ile
Unknown
Simplex
GEN179R320
missense_variant
c.2390C>T
p.Ala797Val
Unknown
GEN179R321
missense_variant
c.2267C>A
p.Ala756Glu
Unknown
GEN179R322
missense_variant
c.3340G>A
p.Gly1114Arg
Unknown
GEN179R323
missense_variant
c.3620G>A
p.Arg1207Gln
Unknown
GEN179R324
missense_variant
c.3620G>A
p.Arg1207Gln
Unknown
GEN179R325
missense_variant
c.2295G>A
p.Met765Ile
Unknown
GEN179R326
missense_variant
c.2295G>A
p.Met765Ile
Unknown
GEN179R327
missense_variant
c.1874G>A
p.Arg625Gln
Unknown
GEN179R328
missense_variant
c.1874G>A
p.Arg625Gln
Unknown
GEN179R329
frameshift_variant
c.412dup
p.Val138GlyfsTer49
Unknown
GEN179R330
frameshift_variant
c.3060_3063del
p.Lys1021LeufsTer10
Unknown
GEN179R331
missense_variant
c.2557C>T
p.Arg853Cys
Unknown
GEN179R332
missense_variant
c.4118C>T
p.Ser1373Phe
Unknown
GEN179R333
missense_variant
c.1658C>T
p.Pro553Leu
Unknown
GEN179R334
missense_variant
c.391G>A
p.Asp131Asn
Unknown
GEN179R335
missense_variant
c.4295A>T
p.Asp1432Val
Unknown
GEN179R336
missense_variant
c.2684G>A
p.Arg895Gln
Unknown
GEN179R337
missense_variant
c.2629G>C
p.Gly877Arg
Unknown
GEN179R338
missense_variant
c.2222A>T
p.Asp741Val
Unknown
GEN179R339
missense_variant
c.1873C>T
p.Arg625Trp
Unknown
GEN179R340
missense_variant
c.4187C>T
p.Thr1396Met
Unknown
GEN179R341
copy_number_loss
Familial
Maternal
Simplex
GEN179R342
copy_number_loss
De novo
GEN179R343a
missense_variant
c.611T>A
p.Leu204Gln
Familial
Both parents
Multiplex
GEN179R344
copy_number_loss
Unknown
GEN179R345
frameshift_variant
c.925dup
p.Ser309LysfsTer2
De novo
GEN179R346
missense_variant
c.4363G>C
p.Glu1455Gln
De novo
GEN179R347
copy_number_loss
Familial
Paternal
GEN179R348
splice_site_variant
c.3484+1G>T
Familial
Maternal
Simplex
GEN179R349
copy_number_loss
Familial
Paternal
GEN179R350a
missense_variant
c.4456C>A
p.Leu1486Ile
Familial
Maternal
GEN179R350b
missense_variant
c.4237C>T
p.Pro1413Ser
Familial
Paternal
GEN179R351
splice_site_variant
c.931+1G>T
Familial
Maternal
Multiplex
GEN179R352
missense_variant
c.2687G>A
p.Arg896Gln
Unknown
Simplex
GEN179R353
inframe_insertion
c.77_79dup
p.Glu26_Leu27insGln
Unknown
GEN179C001
synonymous_variant
rs1045874
c.511C>T
p.(=)
Discovery
GEN179C002
synonymous_variant
rs2303298
c.999C>T;c.900C>T;c.840C>T;c.105C>T
p.(=)
Discovery
GEN179C003
3_prime_UTR_variant
rs1045881
c.*110G>A
Discovery
GEN179C004
synonymous_variant
rs2303298
c.999C>T;c.900C>T;c.840C>T;c.105C>T
p.(=)
Chinese Han
Discovery
2
Deletion-Duplication
14
2
Deletion-Duplication
81
Summary Statistics:
# of Reports: 3
# of Models: 2
External Links
Model Summary
Nrxn1- alpha null rats show increased hyperactivity levels and decrease in learning and memory.
References
Primary
Phenotypic characterization of nonsocial behavioral impairment in neurexin 1 knockout rats.
Additional
An intra-amygdala circuit specifically regulates social fear learning.
Additional
Convergent microstructural brain changes across genetic models of autism spectrum disorder-A pilot study.
Model Type:
Genetic
Model Genotype:
Homozygous
Mutation:
Biallelic deletion of NRXN1-alpha.
Allele Type: Targeted (knockout)
Strain of Origin: Not Specified
Genetic Background: Sprague Dawley
ES Cell Line: Not Specified
Mutant ES Cell Line: Not Specified
Model Source: SAGE Labs
General locomotor activity1
Increased
View More
Description: Increased activity
Exp Paradigm: Open field test
Open field test
4-5.5 months
Abnormal
View More
Description: Tract-based spatial statistics show significant differences in fractional anisotropy, mean and radial diffusivity
Exp Paradigm: Measurement of fractional anisotropy, mean, axial and radial diffusivity
Diffusion tensor imaging (dti)
6 weeks
Morphology of the external capsule3
Abnormal
View More
Description: Significant difference in axial diffusivity
Exp Paradigm: Measurement of fractional anisotropy, mean, axial and radial diffusivity
Diffusion tensor imaging (dti)
6 weeks
Morphology and size of the corpus callosum3
Abnormal
View More
Description: Significant difference in mean diffusivity
Exp Paradigm: Measurement of fractional anisotropy, mean, axial and radial diffusivity
Diffusion tensor imaging (dti)
6 weeks
Abnormal
View More
Description: Significant difference in axial diffusivity
Exp Paradigm: Measurement of fractional anisotropy, mean, axial and radial diffusivity
Diffusion tensor imaging (dti)
6 weeks
Decreased
View More
Description: Decreased action potential firing
Exp Paradigm: In vivo local field potential (LFP) recordings
In vivo local field potential (lfp) recordings
2-3 months
Presynaptic function: paired-pulse facilitation2
Decreased
View More
Description: Decreased paired-pulse facilitation
Exp Paradigm: Whole-cell patch clamp
Whole-cell patch clamp
2-3 months
Decreased
View More
Description: Decreased membrane potential
Exp Paradigm: Whole-cell patch clamp
Whole-cell patch clamp
2-3 months
Decreased
View More
Description: Decreased local field potential
Exp Paradigm: In vivo local field potential (LFP) recordings
In vivo local field potential (lfp) recordings
2-3 months
Startle response: acoustic stimulus1
Increased
View More
Description: Increased startle response
Exp Paradigm: Acoustic startle reflex test
Acoustic startle reflex test
4-5.5 months
Social fear conditioning: memory of context2
Decreased
View More
Description: Decreased memory in contextual social fear conditioning
Exp Paradigm: Fear conditioning test
Fear conditioning test
2-3 months
Social fear conditioning: learning2
Decreased
View More
Description: Decreased learning in social fear conditioning
Exp Paradigm: Fear conditioning test
Fear conditioning test
2-3 months
Decreased
View More
Description: Decreased social interaction
Exp Paradigm: Reciprocal social interaction test
Reciprocal social interaction test
2-3 months
Decreased
View More
Description: Decreased social approach
Exp Paradigm: Reciprocal social interaction test
Reciprocal social interaction test
2-3 months
Social fear conditioning: memory of cue2
Decreased
View More
Description: Decreased memory in cued social fear conditioning
Exp Paradigm: Fear conditioning test
Fear conditioning test
2-3 months
Decreased
View More
Description: Decreased weight
Exp Paradigm: General observations
General observations
4-5.5 months
Morphology of the internal capsule3
No change
Diffusion tensor imaging (dti)
6 weeks
No change
Diffusion tensor imaging (dti)
6 weeks
No change
Diffusion tensor imaging (dti)
6 weeks
Intrinsic membrane properties2
No change
Whole-cell patch clamp
2-3 months
Miniature post synaptic currents: excitatory2
No change
Whole-cell patch clamp
2-3 months
No change
Prepulse inhibition
4-5.5 months
Inanimate object preference2
No change
Reciprocal social interaction test
2-3 months
Not Reported:
Circadian sleep/wake cycle, Communications, Developmental profile, Emotion, Immune response, Learning & memory, Maternal behavior, Molecular profile, Motor phenotype, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior
Summary Statistics:
Total Interactions: 76
Total Publications: 29
Show all nodes
Hide non-ASD
Interactor Symbol
Interactor Name
Interactor Organism
Entrez ID
Uniprot ID
Interaction Type
Evidence
Reference
GABRA1
gamma-aminobutyric acid (GABA) A receptor, alpha 1
2554
P14867
Surface plasmon resonance (SPR); IP/WB
Zhang C , et al. 2010
LRRTM2
leucine rich repeat transmembrane neuronal 2
26045
O43300
IP/WB
Um JW , et al. 2016
LRRTM3
leucine rich repeat transmembrane neuronal 3
347731
Q86VH5
IP/WB
Um JW , et al. 2016
LRRTM4
leucine rich repeat transmembrane neuronal 4
80059
Q86VH4
IP/WB
Um JW , et al. 2016
MACF1
microtubule-actin crosslinking factor 1
23499
Q9UPN3
Y2H
Nakayama M , et al. 2002
MLLT4
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
4301
P55196
Y2H
Hock B , et al. 1998
MYO16
myosin XVI
23026
Q9Y6X6
Y2H
Nakayama M , et al. 2002
PDZD2
PDZ domain containing 2
23037
O15018
Y2H
Nakayama M , et al. 2002
SIPA1L1
signal-induced proliferation-associated 1 like 1
26037
O43166
Y2H
Nakayama M , et al. 2002
APBA2
amyloid beta (A4) precursor protein-binding, family A, member 2
321
Q59G28
GST; IP/WB
Biederer T and Sdhof TC 2000
Arx
aristaless related homeobox
11878
O35085
ChIP-qPCR
Quill ML , et al. 2011
Astn1
astrotactin 1
11899
Q61137
IP; LC-MS/MS
Traunmller L , et al. 2016
Auts2
autism susceptibility candidate 2
319974
Q6PED7
ChIP-Seq; Zebrafish reporter transgenic studies
Oksenberg N , et al. 2014
C3
complement component 3
12266
P01027
IP/WB; IP; LC-MS/MS
Traunmller L , et al. 2016
Cask
calcium/calmodulin-dependent serine protein kinase (MAGUK family)
12361
O70589
IP; LC-MS/MS
Muhammad K , et al. 2015
Cbln1
cerebellin 1 precursor
12404
Q9R171
GST; Surface plasmon resonance (SPR)
Uemura T , et al. 2010
Cbln2
cerebellin 2 precursor protein
12405
Q8BGU2
IP; LC-MS/MS
Traunmller L , et al. 2016
Cbln4
cerebellin 4 precursor protein
228942
Q8BME9
IP; LC-MS/MS
Traunmller L , et al. 2016
Chadl
chondroadherin-like
214685
E9Q7T7
IP; LC-MS/MS
Traunmller L , et al. 2016
DLG4
Postsynaptic density protein 95
13385
Q62108
IP; LC-MS/MS
Frank RA , et al. 2016
FMR1
fragile X mental retardation 1
14265
P35922
HITS-CLIP
Darnell JC , et al. 2011
GRID2
glutamate receptor, ionotropic, delta 2
14804
Q61625
IP; LC-MS/MS; Cell surface binding assay; Cell aggregation assay; in vitro binding assay
Uemura T , et al. 2010
Khdrbs3
KH domain containing, RNA binding, signal transduction associated 3
13992
Q9R226
RNA-Seq; RT-PCR
Traunmller L , et al. 2016
Lin7c
lin-7 homolog C (C. elegans)
22343
A2ARI2
MS/MS
Olsen O , et al. 2005
Lrrtm1
leucine rich repeat transmembrane neuronal 1
74342
Q8K377
IP; LC-MS/MS
Traunmller L , et al. 2016
Lrrtm2
leucine rich repeat transmembrane neuronal 2
107065
Q8BGA3
IP; LC-MS/MS
Traunmller L , et al. 2016
Lrrtm3
leucine rich repeat transmembrane neuronal 3
216028
Q8BZ81
IP; LC-MS/MS
Traunmller L , et al. 2016
Lrrtm4
leucine rich repeat transmembrane neuronal 4
243499
Q80XG9
IP; LC-MS/MS
Traunmller L , et al. 2016
Net1
neuroepithelial cell transforming gene 1
56349
O09118
IP; LC-MS/MS
Traunmller L , et al. 2016
NLGN1
neuroligin 1
192167
Q99K10
IP/WB; Cell aggregation assay; Co-localization
Singh SK , et al. 2016
Nlgn1
neuroligin 1
192167
Q99K10
IP/WB; IP; LC-MS/MS
Traunmller L , et al. 2016
Nlgn2
neuroligin 2
216856
Q69ZK9
IP; LC-MS/MS
Traunmller L , et al. 2016
Nlgn3
neuroligin 3
245537
Q8BYM5
IP/WB; IP; LC-MS/MS
Traunmller L , et al. 2016
Nlgn4l
neuroligin 4-like
100113365
B0F2B4
IP; LC-MS/MS
Traunmller L , et al. 2016
Nptx1
neuronal pentraxin 1
18164
Q62443
IP; LC-MS/MS
Traunmller L , et al. 2016
Nptxr
neuronal pentraxin receptor
73340
Q99J85
IP; LC-MS/MS
Traunmller L , et al. 2016
Rbfox1
RNA binding protein, fox-1 homolog (C. elegans) 1
268859
Q9JJ43
HITS-CLIP
Weyn-Vanhentenryck SM , et al. 2014
Sdcbp
syndecan binding protein
53378
O08992
IP; LC-MS/MS
Muhammad K , et al. 2015
Sorcs1
sortilin-related VPS10 domain containing receptor 1
58178
Q9JLC4
IP; LC-MS/MS
Traunmller L , et al. 2016
Sorcs2
sortilin-related VPS10 domain containing receptor 2
81840
Q9EPR5
IP; LC-MS/MS
Traunmller L , et al. 2016
Sorcs3
sortilin-related VPS10 domain containing receptor 3
66673
Q8VI51
IP; LC-MS/MS
Traunmller L , et al. 2016
SPARCL1
SPARC-like 1
13602
P70663
IP/WB; Cell surface binding assay
Singh SK , et al. 2016
Spon1
spondin 1, (f-spondin) extracellular matrix protein
233744
Q8VCC9
IP; LC-MS/MS
Traunmller L , et al. 2016
Syt13
synaptotagmin XIII
80976
Q9EQT6
GST
Fukuda M and Mikoshiba K 2001
Sytl1
synaptotagmin-like 1
269589
Q99N80
GST
Fukuda M and Mikoshiba K 2001
Sytl2
synaptotagmin-like 2
83671
Q99N50
GST
Fukuda M and Mikoshiba K 2001
Sytl3
synaptotagmin-like 3
83672
Q99N48
GST
Fukuda M and Mikoshiba K 2001
Thbs1
thrombospondin 1
21825
P35441
IP; LC-MS/MS
Traunmller L , et al. 2016
Zbtb20
zinc finger and BTB domain containing 20
56490
Q8K0L9
ChIP-Seq; Gene microarray
Rasmussen MB , et al. 2014
Abpa2
amyloid beta (A4) precursor protein-binding, family A, member 2
83610
O35431
GST
Biederer T and Sdhof TC 2000
Apba1
amyloid beta (A4) precursor protein-binding, family A, member 1
83589
O35430
GST
Biederer T and Sdhof TC 2000
Cask
calcium/calmodulin-dependent serine protein kinase (MAGUK family)
29647
Q62915
Y2H; Affinity chromatography
Hata Y , et al. 1996
LRRTM1
leucine rich repeat transmembrane neuronal 1
679668
D4A6D8
IP; LC-MS/MS
Savas JN , et al. 2015
Lrrtm2
leucine rich repeat transmembrane neuronal 2
685472
D4A7P2
Affinity chromatography; MS; Cell surface binding assay
de Wit J , et al. 2010
MIB1
mindbomb E3 ubiquitin protein ligase 1
307594
D3ZUV2
Affinity chromatography; LC-MS/MS
Mertz J , et al. 2015
Nlgn1
neuroligin 1
116647
Q62765
IP; LC-MS/MS; Co-localization
Savas JN , et al. 2015
NLGN1
neuroligin 1
116647
Q62765
Affinity chromatography; IP/WB
Ichtchenko K , et al. 1995
Nlgn1
neuroligin 1
116647
Q62765
Affinity chromatography
Ichtchenko K , et al. 1996
Nlgn2
neuroligin 2
117096
Q62888
IP; LC-MS/MS
Savas JN , et al. 2015
Nlgn2
neuroligin 2
117096
Q62888
Affinity chromatography
Ichtchenko K , et al. 1996
Nlgn3
neuroligin 3
171297
Q62889
IP; LC-MS/MS
Savas JN , et al. 2015
Nlgn3
neuroligin 3
171297
Q62889
Affinity chromatography
Ichtchenko K , et al. 1996
Nxph1
neurexophilin 1
25501
Q63366
Affinity chromatography
Missler M and Sdhof TC 1998
Nxph3
neurexophilin 3
59315
Q9Z2N5
WB; Affinity chromatography
Missler M , et al. 1998
Ppp1r9b
protein phosphatase 1, regulatory subunit 9B
84686
O35274
in vitro binding assay; IP; LC-MS/MS
Muhammad K , et al. 2015
Rph3a
rabphilin 3A homolog (mouse)
22895
P47709
Affinity chromatography
Perin MS 1996
SDCBP2
syndecan binding protein (syntenin) 2
27111
Q9H190
Y2H
Koroll M , et al. 2001
Sorcs1
sortilin-related VPS10 domain containing receptor 1
309533
F1LUZ4
IP; LC-MS/MS; in vitro binding assay; Co-localization; Cell surface binding assay
Savas JN , et al. 2015
Sorcs2
sortilin-related VPS10 domain containing receptor 2
305438
D3ZW09
IP; LC-MS/MS
Savas JN , et al. 2015
Syt1
synaptotagmin I
25716
P21707
Affinity chromatography; GST; I-125 binding assay
Hata Y , et al. 1993
Syt2
synaptotagmin II
24805
P29101
Affinity chromatography
Perin MS 1996
Syt4
synaptotagmin IV
64440
P50232
Affinity chromatography
Perin MS 1996
Syt5
synaptotagmin V
54309
P47861
Affinity chromatography
Perin MS 1996
Syt6
synaptotagmin VI
60565
Q62746
Affinity chromatography
Perin MS 1996
Syt7
synaptotagmin VII
59267
Q62747
Affinity chromatography
Perin MS 1996
Syt9
synaptotagmin IX
60564
Q925C0
Affinity chromatography
Perin MS 1996