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Relevance to Autism

A homozygous mutation in the NCKAP5L gene was found to segregate perfectly with disease in a multiplex ASD family. This mutation was not observed in 1340 control chromosomes. Two additional homozygous mutations and an additional compound heterozygous mutation in the NCKAP5L gene were identified in four ASD cases from the replication cohort that were not observed in 371 controls (Chahrour et al., 2012).

Molecular Function

Unknown

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Whole-exome sequencing and homozygosity analysis implicate depolarization-regulated neuronal genes in autism.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD
Support
Large-scale discovery of novel genetic causes of developmental disorders.
Unknown diagnosis

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN350R001a 
 missense_variant 
 c.32G>A 
 p.Gly11Asp 
 Familial 
 Both parents 
 Multiplex 
 GEN350R002a 
 missense_variant 
 c.3566G>A 
 p.Ser1189Asn 
 Familial 
  
  
 GEN350R002b 
 missense_variant 
 NM_001037806:c.3198_3199GC>AG 
 p.Ala1066Ser 
 Familial 
  
  
 GEN350R003a 
 missense_variant 
 c.3196G>T 
 p.Ala1066Ser 
 Familial 
 Both parents 
  
 GEN350R004a 
 missense_variant 
 c.976T>A 
 p.Leu326Met 
 Familial 
 Both parents 
  
 GEN350R005a 
 missense_variant 
 c.976T>A 
 p.Leu326Met 
 Familial 
 Both parents 
  
 GEN350R006 
 missense_variant 
 c.2579C>A 
 p.Ser860Tyr 
 De novo 
  
 Unknown 
 GEN350R007 
 missense_variant 
 c.3392C>A 
 p.Pro1131His 
 Unknown 
  
  
 GEN350R008 
 missense_variant 
 c.2924C>T 
 p.Ala975Val 
 De novo 
  
 Simplex 
 GEN350R009 
 missense_variant 
 c.955G>A 
 p.Gly319Ser 
 De novo 
  
 Simplex 
 GEN350R010 
 missense_variant 
 c.2665A>G 
 p.Lys889Glu 
 De novo 
  
  
 GEN350R011 
 synonymous_variant 
 c.2649C>T 
 p.Ile883%3D 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
12
Duplication
 1
 
12
Deletion-Duplication
 8
 
12
Deletion-Duplication
 16
 

No Animal Model Data Available


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
APC adenomatous polyposis coli 324 P25054 Y2H
Bandyopadhyay S , et al. 2010
EXOC1 exocyst complex component 1 55763 Q9NV70 IP; LC-MS/MS
Huttlin EL , et al. 2015
FMR1 fragile X mental retardation 1 2332 G8JLE9 PAR-CLIP; RNA immunoprecipitation (RIP)
Ascano M Jr , et al. 2012
UBC ubiquitin C 7316 P63279 IP/WB
Kim W , et al. 2011

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