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Relevance to Autism

A recurrent de novo heterozygous missense variant in the NACC1 gene (c.892C>T;p.Arg298Trp) was osberved in seven individuals presenting with a neurodevelopmental disorder characterized by microcephaly, profound developmental delay and/or intellectual disability, cataracts, epilepsy, irritability, failure to thrive, and stereotypic hand movements (Schoch et al., 2017). De novo mutations in NACC1 had previously been observed in Gilissen et al., 2014 (a de novo missense variant in a patient originally described in de Ligt et al., 2012 that presented with developmental delay, intellectual disability, autistic features, and schizoaffective disorder) and in Iossifov et al., 2014 (a de novo splice-site variant in an ASD proband from the Simons Simplex Collection).

Molecular Function

This gene encodes a member of the BTB/POZ protein family. BTB/POZ proteins are involved in several cellular processes including proliferation, apoptosis and transcription regulation. The encoded protein is a transcriptional repressor that plays a role in stem cell self-renewal and pluripotency maintenance.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
A Recurrent De Novo Variant in NACC1 Causes a Syndrome Characterized by Infantile Epilepsy, Cataracts, and Profound Developmental Delay.
DD, ID, epilepsy/seizures
Stereotypic hand movements, microcephaly
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Genome sequencing identifies major causes of severe intellectual disability.
DD, ID
Autistic features, schizoaffective disorder
Support
Prevalence and phenotypic impact of rare potentially damaging variants in autism spectrum disorder
ASD
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
Increased diagnostic and new genes identification outcome using research reanalysis of singleton exome sequencing.
ID, epilepsy/seizures
Support
Variantrecurrence in neurodevelopmental disorders: the use of publicly available genomic data identifies clinically relevant pathogenic missense v...
DD
Support
Neurodevelopmental disorder with epilepsy, catarac
Support
Elucidation of the phenotypic spectrum and genetic landscape in primary and secondary microcephaly.
Microcephaly
DD, stereotypies
Support
ASD, ID

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN868R001 
 missense_variant 
 c.892C>T 
 p.Arg298Trp 
 De novo 
  
  
 GEN868R002 
 missense_variant 
 c.892C>T 
 p.Arg298Trp 
 De novo 
  
  
 GEN868R003 
 missense_variant 
 c.892C>T 
 p.Arg298Trp 
 De novo 
  
  
 GEN868R004 
 missense_variant 
 c.892C>T 
 p.Arg298Trp 
 De novo 
  
  
 GEN868R005 
 missense_variant 
 c.892C>T 
 p.Arg298Trp 
 De novo 
  
  
 GEN868R006 
 missense_variant 
 c.892C>T 
 p.Arg298Trp 
 De novo 
  
  
 GEN868R007 
 missense_variant 
 c.892C>T 
 p.Arg298Trp 
 De novo 
  
  
 GEN868R008 
 missense_variant 
 c.1402C>T 
 p.Arg468Cys 
 De novo 
  
  
 GEN868R009 
 splice_site_variant 
 c.946+2T>C 
  
 De novo 
  
 Simplex 
 GEN868R010 
 missense_variant 
 c.892C>T 
 p.Arg298Trp 
 De novo 
  
 Simplex 
 GEN868R011 
 missense_variant 
 c.892C>T 
 p.Arg298Trp 
 De novo 
  
  
 GEN868R012 
 missense_variant 
 c.892C>T 
 p.Arg298Trp 
 De novo 
  
  
 GEN868R013 
 intron_variant 
 c.1324+27C>T 
  
 De novo 
  
 Simplex 
 GEN868R014 
 missense_variant 
 c.254G>A 
 p.Cys85Tyr 
 Unknown 
  
  
 GEN868R015 
 missense_variant 
 c.1120G>C 
 p.Gly374Arg 
 De novo 
  
  
 GEN868R016 
 missense_variant 
 c.1354A>G 
 p.Lys452Glu 
 Unknown 
  
  
  et al.  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
19
Deletion
 6
 
19
Deletion
 2
 
19
Deletion-Duplication
 31
 
19
Deletion-Duplication
 6
 
19
Deletion-Duplication
 3
 
19
Duplication
 1
 
19
Duplication
 1
 

No Animal Model Data Available

 

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