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Relevance to Autism

Genome-wide investigation of tandem repeats in 17,231 genomes of families with autism from the Autism Speaks MSSNG project and the Simons Simplex Collection in Trost et al., 2020 identified a rare tandem repeat expansion in the MYOCD gene (chr17:12693129-12694105 (AAAAT)) in six unrelated ASD probands. This tandem repeat in MYOCD was observed in more than 0.1% of ASD-affected individuals in this cohort and had a frequency 0.1% in unaffected siblings, 1000 Genomes, and 1,612 additional population controls from GTEx and the Mayo Clinic Biobank.

Molecular Function

This gene encodes a nuclear protein, which is expressed in heart, aorta, and in smooth muscle cell-containing tissues. It functions as a transcriptional co-activator of serum response factor (SRF) and modulates expression of cardiac and smooth muscle-specific SRF-target genes, and thus may play a crucial role in cardiogenesis and differentiation of the smooth muscle cell lineage.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Genome-wide detection of tandem DNA repeats that are expanded in autism
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Exploring the biological role of postzygotic and germinal de novo mutations in ASD
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1202R001 
 microsatellite 
  
  
 Unknown 
  
 Unknown 
 GEN1202R002 
 microsatellite 
  
  
 Unknown 
  
 Unknown 
 GEN1202R003 
 microsatellite 
  
  
 Unknown 
  
 Multiplex 
 GEN1202R004 
 microsatellite 
  
  
 Unknown 
  
 Simplex 
 GEN1202R005 
 microsatellite 
  
  
 Unknown 
  
 Simplex 
 GEN1202R006 
 microsatellite 
  
  
 Unknown 
  
 Simplex 
 GEN1202R007 
 missense_variant 
 c.572G>T 
 p.Gly191Val 
 De novo 
  
 Simplex 
 GEN1202R008 
 missense_variant 
 c.247C>T 
 p.Leu83Phe 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
17
Deletion-Duplication
 36
 
17
Duplication
 7
 
17
Duplication
 1
 
17
Duplication
 2
 
17
Duplication
 1
 
17
Duplication
 3
 
17
Duplication
 1
 

No Animal Model Data Available

No PIN Data Available
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