Summary Statistics:
ASD Reports: 9
Recent Reports: 1
Annotated variants: 96
Associated CNVs: 10
Evidence score: 3
Gene Score: 4
Relevance to Autism
De novo missense variants and rare inherited loss-of-function (LoF) variants in the MUC4 gene were identified in ASD probands from the Simons Simplex Collection and the Autism Sequencing Consortium (Iossifov et al., 2012; De Rubeis et al., 2014; Iossifov et al., 2014; Krumm et al., 2015). Targeted sequencing of 536 Chinese ASD probands and 1457 Chinese controls in Guo et al., 2017 identified additional rare inherited LoF and damaging missense variants in this gene in ASD probands. Transmission and De Novo Association (TADA) analysis of a combined cohort consisting of Chinese ASD probands and controls, as well as ASD probands and controls from the Simons Simplex Collection and the Autism Sequencing Consortium, identified MUC4 as an ASD candidate gene with a PTADA of 0.000105.
Molecular Function
The major constituents of mucus, the viscous secretion that covers epithelial surfaces such as those in the trachea, colon, and cervix, are highly glycosylated proteins called mucins. These glycoproteins play important roles in the protection of the epithelial cells and have been implicated in epithelial renewal and differentiation. This gene encodes an integral membrane glycoprotein found on the cell surface, although secreted isoforms may exist.
References
Primary
De novo gene disruptions in children on the autistic spectrum.
ASD
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD
Support
Exome sequencing of 457 autism families recruited online provides evidence for autism risk genes
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Support
Excess of rare, inherited truncating mutations in autism.
ASD
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Recent Recommendation
Targeted sequencing and functional analysis reveal brain-size-related genes and their networks in autism spectrum disorders.
ASD
GEN943R001
missense_variant
c.9023C>T
p.Ser3008Phe
De novo
Simplex
GEN943R002
missense_variant
c.2454C>A
p.Ser818Arg
De novo
GEN943R003
missense_variant
c.6533C>A
p.Pro2178His
De novo
Simplex
GEN943R004
missense_variant
c.3253G>C
p.Asp1085His
De novo
Simplex
GEN943R005
missense_variant
c.5683A>T
p.Asn1895Tyr
De novo
Simplex
GEN943R006
frameshift_variant
G>GA
-4263?
Familial
Maternal
Simplex
GEN943R007
frameshift_variant
G>GCA
-4190?
Familial
Maternal
Simplex
GEN943R008
frameshift_variant
C>CA
-3906?
Familial
Maternal
Simplex
GEN943R009
frameshift_variant
G>GCGTC
-3862D?
Familial
Paternal
Simplex
GEN943R010
frameshift_variant
G>GCGTC
-3862D?
Familial
Paternal
Simplex
GEN943R011
frameshift_variant
GCCTGACC>G
-3132
Familial
Paternal
Simplex
GEN943R012
frameshift_variant
GCC>G
-3133
Familial
Paternal
Simplex
GEN943R013
frameshift_variant
A>AGGGGTGGCGT
-3008TPP?
Familial
Paternal
Simplex
GEN943R014
frameshift_variant
GCA>G
-2829
Familial
Maternal
Simplex
GEN943R015
frameshift_variant
G>GCA
-2750?
Familial
Maternal
Simplex
GEN943R016
frameshift_variant
G>GCA
-2750?
Familial
Paternal
Simplex
GEN943R017
frameshift_variant
G>GCA
-2750?
Familial
Paternal
Simplex
GEN943R018
frameshift_variant
G>GCA
-2750?
Familial
Maternal
Simplex
GEN943R019
frameshift_variant
G>GCA
-2750?
Familial
Maternal
Simplex
GEN943R020
frameshift_variant
G>GCA
-2750?
Familial
Maternal
Simplex
GEN943R021
frameshift_variant
G>GCA
-2750?
Familial
Maternal
Simplex
GEN943R022
frameshift_variant
G>GCA
-2750?
Familial
Paternal
Simplex
GEN943R023
frameshift_variant
G>GCA
-2750?
Familial
Paternal
Simplex
GEN943R024
frameshift_variant
A>AAGGCT
-2742S?
Familial
Paternal
Simplex
GEN943R025
frameshift_variant
GTGTATGCTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGTGTC>G
-2701
Familial
Paternal
Simplex
GEN943R026
frameshift_variant
GTGTATGCTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGTGTC>G
-2701
Familial
Paternal
Simplex
GEN943R027
frameshift_variant
GTGTCA>G
-2700
Familial
Paternal
Simplex
GEN943R028
frameshift_variant
GTGTCA>G
-2700
Familial
Maternal
Simplex
GEN943R029
frameshift_variant
GTGTCA>G
-2700
Familial
Maternal
Simplex
GEN943R030
frameshift_variant
A>AC
-2064?
Familial
Maternal
Simplex
GEN943R031
frameshift_variant
G>GC
-1749?
Familial
Maternal
Simplex
GEN943R032
frameshift_variant
G>GA
-1743?
Familial
Maternal
Simplex
GEN943R033
frameshift_variant
G>GA
-1743?
Familial
Maternal
Simplex
GEN943R034
frameshift_variant
G>GA
-1743?
Familial
Maternal
Simplex
GEN943R035
frameshift_variant
A>ATT
-1670?
Familial
Paternal
Simplex
GEN943R036
frameshift_variant
A>ATT
-1670?
Familial
Maternal
Simplex
GEN943R037
frameshift_variant
G>GT
-1669?
Familial
Maternal
Simplex
GEN943R038
frameshift_variant
G>GT
-1669?
Familial
Maternal
Simplex
GEN943R039
frameshift_variant
G>GT
-1669?
Familial
Maternal
Simplex
GEN943R040
frameshift_variant
GTGTGA>G
-1612
Familial
Maternal
Simplex
GEN943R041
frameshift_variant
GTGTGA>G
-1612
Familial
Maternal
Simplex
GEN943R042
frameshift_variant
G>GTC
-1372?
Familial
Maternal
Simplex
GEN943R043
frameshift_variant
T>TGACCTGTGGA
-973STG?
Familial
Paternal
Simplex
GEN943R044
frameshift_variant
T>TGACCTGTGGA
-973STG?
Familial
Maternal
Simplex
GEN943R045
frameshift_variant
CA>C
-11
Familial
Maternal
Simplex
GEN943R046
frameshift_variant
CA>C
-11
Familial
Paternal
Simplex
GEN943R047
splice_site_variant
ATCTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTG>A
p.?
Familial
Paternal
Simplex
GEN943R048
stop_gained
c.3235C>T
p.Gln1079Ter
Familial
Paternal
Simplex
GEN943R049
stop_gained
c.2935C>T
p.Arg979Ter
Familial
Maternal
Simplex
GEN943R050
stop_gained
C>A
p.Glu859Ter
Familial
Maternal
Simplex
GEN943R051
stop_gained
C>A
p.Glu859Ter
Familial
Maternal
Simplex
GEN943R052
stop_gained
c.2575G>T
p.Glu859Ter
Familial
Paternal
Simplex
GEN943R053
stop_gained
A>ATAC
p.Ala3753AlaTer
Familial
Maternal
Simplex
GEN943R054
stop_gained
c.83-3070C>G
Familial
Maternal
Simplex
GEN943R055
stop_gained
c.83-5854C>A
Familial
Paternal
Simplex
GEN943R056
stop_gained
c.83-5854C>A
Familial
Maternal
Simplex
GEN943R057
stop_gained
c.83-5854C>A
Familial
Paternal
Simplex
GEN943R058
stop_gained
c.83-6910C>A
Familial
Maternal
Simplex
GEN943R059
stop_gained
c.83-10030C>G
Familial
Paternal
Simplex
GEN943R060
stop_gained
c.83-10246C>G
Familial
Maternal
Simplex
GEN943R061
frameshift_variant
T>TG
-913?
Familial
Maternal
Simplex
GEN943R062
frameshift_variant
TC>T
-97
Familial
Maternal
Simplex
GEN943R063
frameshift_variant
G>GGTGTC
-4174D?
Familial
Paternal
Simplex
GEN943R064
frameshift_variant
G>GGTGTC
-4174D?
Familial
Paternal
Simplex
GEN943R065
frameshift_variant
T>TGCTG
-3993Q?
Familial
Maternal
Simplex
GEN943R066
frameshift_variant
GCA>G,GCG,GCC
-3933
Familial
Paternal
Simplex
GEN943R067
frameshift_variant
C>CA
-3906?
Familial
Maternal
Simplex
GEN943R068
frameshift_variant
G>GCGTC
-3862D?
Familial
Maternal
Simplex
GEN943R069
frameshift_variant
G>GCGTC
-3862D?
Familial
Maternal
Simplex
GEN943R070
frameshift_variant
G>GCGTC
-3862D?
Familial
Maternal
Simplex
GEN943R071
frameshift_variant
G>GCGTC
-3862D?
Familial
Paternal
Simplex
GEN943R072
frameshift_variant
ACCTGTGGATGCTGAGGAAGTGTCCGTGACAGGAAGACG>A
-3680
Familial
Paternal
Simplex
GEN943R073
frameshift_variant
GTC>G
-3621
Familial
Paternal
Simplex
GEN943R074
frameshift_variant
GCGTC>G
-3589
Familial
Maternal
Simplex
GEN943R075
frameshift_variant
G>GGGGTGGC
-3008AT?
Familial
Maternal
Simplex
GEN943R076
frameshift_variant
G>GCA
-2750?
Familial
Maternal
Simplex
GEN943R077
frameshift_variant
G>GCA
-2750?
Familial
Maternal
Simplex
GEN943R078
frameshift_variant
A>AAG
-2310?
Familial
Maternal
Simplex
GEN943R079
frameshift_variant
A>ATT
-1670?
Familial
Paternal
Simplex
GEN943R080
frameshift_variant
G>GT
-1669?
Familial
Paternal
Simplex
GEN943R081
frameshift_variant
G>GT
-1669?
Familial
Maternal
Simplex
GEN943R082
frameshift_variant
CA>C
-11
Familial
Maternal
Simplex
GEN943R083
splice_site_variant
TCACCCA>CCCCCCC
p.?
Familial
Maternal
Simplex
GEN943R084
splice_site_variant
c.236-2A>G
Familial
Paternal
Simplex
GEN943R085
stop_gained
c.2575G>T
p.Glu859Ter
Familial
Paternal
Simplex
GEN943R086
stop_gained
c.2575G>T
p.Glu859Ter
Familial
Maternal
Simplex
GEN943R087
stop_gained
c.83-10246C>G
Familial
Paternal
Simplex
GEN943R088
frameshift_variant
c.5161_5162insC
p.Val1721AlafsTer5
Familial
GEN943R089
frameshift_variant
c.5068_5069insT
p.Thr1690IlefsTer4
Familial
GEN943R090
missense_variant
c.1678G>A
p.Gly560Arg
Familial
GEN943R091
frameshift_variant
c.292del
p.Thr98ProfsTer93
Familial
Paternal
Multiplex
GEN943R092
synonymous_variant
c.2151G>A
p.Pro717=
De novo
GEN943R093
missense_variant
c.1403G>T
p.Arg468Met
Unknown
GEN943R094
frameshift_variant
c.2356_2357del
p.Gln786AspfsTer92
Familial
Paternal
Multiplex
GEN943R095
frameshift_variant
c.31del
p.Trp11GlyfsTer4
Familial
Paternal
Multiplex
GEN943R096
frameshift_variant
c.31del
p.Trp11GlyfsTer4
Familial
Paternal
Multiplex
No Common Variants Available
3
Deletion-Duplication
69
No Animal Model Data Available
No PIN Data Available