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Relevance to Autism

A number of de novo variants in the MTSS2 gene, including a de novo loss-of-function (LoF) variant and several de novo missense variants, have been identified in ASD probands (Satterstrom et al., 2020; Zhou et al., 2022; Trost et al., 2022). Huang et al., 2022 described a cohort of five unrelated individuals with a recurrent de novo MTSS2 missense variant (c.2011C>T;p.Arg671Trp) presenting with a neurodevelopmental syndrome [Intellectual developmental disorder with ocular anomalies and distinctive facial features (IDDOF); OMIM 620086] characterized by global developmental delay and/or mild intellectual disability, ophthalmological anomalies, distinctive facial features (upslanting palpebral fissures, epicanthus, and bitemporal narrowing), and microcephaly; autism spectrum disorder was diagnosed in two of the three individuals from this cohort who were old enough to be evaluated. Functional analysis of the recurrent p.Arg617Trp missense variant in Drosophila in Huang et al., 2022 demonstrated a partial loss-of-function effect and increased toxicity compared to wild-type MTSS2, suggesting that this variant may act as a dominant-negative allele. A female ASD proband from the SPARK cohort was also found to have the functionally validated de novo p.Arg617Trp missense variant (Zhou et al., 2022).

Molecular Function

Enables GTPase activator activity and small GTPase binding activity. Involved in activation of GTPase activity and cellular response to platelet-derived growth factor stimulus. Located in ruffle membrane.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Intellectual developmental disorder with ocular an
Support
Genomic architecture of autism from comprehensive whole-genome sequence annotation
ASD
Recent Recommendation
DD, ID
ASD, ADHD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1391R001 
 splice_site_variant 
 c.132-1G>C 
  
 De novo 
  
  
 GEN1391R002 
 intron_variant 
 c.132-36del 
  
 De novo 
  
  
 GEN1391R003 
 missense_variant 
 c.1726C>T 
 p.Arg576Cys 
 De novo 
  
 Simplex 
 GEN1391R004 
 missense_variant 
 c.2011C>T 
 p.Arg671Trp 
 De novo 
  
  
 GEN1391R005 
 missense_variant 
 c.517G>A 
 p.Asp173Asn 
 De novo 
  
  
 GEN1391R006 
 intron_variant 
 c.290+38A>C 
  
 De novo 
  
  
 GEN1391R007 
 missense_variant 
 c.1826G>A 
 p.Arg609Gln 
 De novo 
  
  
 GEN1391R008 
 missense_variant 
 c.2011C>T 
 p.Arg671Trp 
 De novo 
  
  
 GEN1391R009 
 missense_variant 
 c.2011C>T 
 p.Arg671Trp 
 De novo 
  
 Simplex 
 GEN1391R010 
 missense_variant 
 c.2011C>T 
 p.Arg671Trp 
 De novo 
  
 Simplex 
 GEN1391R011 
 missense_variant 
 c.2011C>T 
 p.Arg671Trp 
 De novo 
  
 Simplex 
 GEN1391R012 
 missense_variant 
 c.2011C>T 
 p.Arg671Trp 
 De novo 
  
 Simplex 
 GEN1391R013 
 missense_variant 
 c.2011C>T 
 p.Arg671Trp 
 Unknown 
 Not maternal 
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
16
Deletion
 3
 
16
Duplication
 2
 

No Animal Model Data Available

No PIN Data Available
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