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Relevance to Autism

TADA analysis of an integrated cohort of over 40,000 ASD cases across unpublished and published global cohort in Tan et al., 2026 identified MLXIP as an ASD risk gene with a false discovery rare of <0.05; among the ASD-associated variants used in this analysis were two de novo loss-of-function variant in ASD probands originally reported in Fu et al., 2022 and a de novo missense variant identified in an unpublished SPARK proband.

Molecular Function

This gene encodes a protein that functions as part of a heterodimer to activate transcription. The encoded protein forms a heterodimer with Max-like protein X (MLX) and is involved in the regulation of genes in response to cellular glucose levels.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Genomic landscape of rare variants in a Chinese autism cohort and discovery of novel risk genes.
ASD
Support
The Function of MondoA and ChREBP Nutrient-Sensing Factors in Metabolic Disease.
Support
Rare coding variation provides insight into the genetic architecture and phenotypic context of autism
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Partitioning of MLX-Family Transcription Factors to Lipid Droplets Regulates Metabolic Gene Expression.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1564R001 
 frameshift_variant 
 c.1927delinsGC 
 p.Val645ArgfsTer84 
 De novo 
  
 Simplex 
 GEN1564R002 
 splice_site_variant 
 c.2257-2A>G 
 p.? 
 De novo 
  
  
 GEN1564R003 
 missense_variant 
 c.1040T>C 
 p.Leu347Pro 
 De novo 
  
 Simplex 
 GEN1564R004 
 synonymous_variant 
 c.2076G>A 
 p.Ser692= 
 De novo 
  
 Simplex 
 GEN1564R005 
 splice_site_variant 
 c.2257-2A>G 
 p.? 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
12
Duplication
 1
 
12
Duplication
 3
 
12
Duplication
 1
 
12
Duplication
 1
 
12
Deletion-Duplication
 26
 
12
Deletion-Duplication
 2
 

No Animal Model Data Available

 

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