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Relevance to Autism

Two de novo missense variants that were predicted to be probably damaging (defined as MPC 2) were identified in the MKX gene in ASD probands from the Autism Sequencing Consoritum, while an additional protein-truncating variant in this gene was observed in a case sample from the Danish iPSYCH study (Satterstrom et al., 2020). TADA analysis of de novo variants from the Simons Simplex Collection and the Autism Sequencing Consortium and protein-truncating variants from iPSYCH in Satterstrom et al., 2020 identified MKX as a candidate gene with a false discovery rate (FDR) 0.01.

Molecular Function

The protein encoded by this gene is an IRX family-related homeobox protein that may play a role in cell adhesion.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
2022
TS
Support
Analysis of common genetic variation and rare CNVs in the Australian Autism Biobank
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1149R001 
 missense_variant 
 c.277C>G 
 p.Arg93Gly 
 De novo 
  
 Multiplex 
 GEN1149R002 
 missense_variant 
 c.265C>T 
 p.Leu89Phe 
 De novo 
  
 Simplex 
 GEN1149R003 
 copy_number_loss 
  
  
 Familial 
 Maternal 
  
 GEN1149R004 
 missense_variant 
 c.794C>A 
 p.Ser265Tyr 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
10
Deletion-Duplication
 17
 
10
Deletion-Duplication
 2
 
10
Deletion
 2
 
10
Deletion-Duplication
 1
 
10
Duplication
 2
 
10
Duplication
 1
 

No Animal Model Data Available

 

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