MDGA2
Homo sapiens
Gene Name: MAM domain containing glycosylphosphatidylinositol anchor 2
Aliases: MAMDC1; c14_5286
Chromosome No: 14
Chromosome Band: 14q21.3
Genetic Category: Genetic Association-Rare Single Gene variant
Aliases: MAMDC1; c14_5286
Chromosome No: 14
Chromosome Band: 14q21.3
Genetic Category: Genetic Association-Rare Single Gene variant
Summary Statistics:
ASD Reports: 9
Recent Reports: 1
Annotated variants: 21
Associated CNVs: 2
Evidence score: 2
ASD Reports: 9
Recent Reports: 1
Annotated variants: 21
Associated CNVs: 2
Evidence score: 2
Gene Score: 4
Associated Disorders: |
|
Relevance to Autism
Rare variants in the MDGA2 gene have been identified with autism (Bucan et al., 2009). In addition, MDGA2 has been found to have genetic association with neuroticism (van den Oord et al., 2008).
Molecular Function
The encoded protein is a member of the immunoglobulin domain cell adhesion molecule subfamily and and is proposed to be involved in regulating neuronal migration and axonal guidance
References
Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Genome-wide analyses of exonic copy number variants in a family-based study point to novel autism susceptibility genes.
ASD
Support
Epileptic encephalopathies of the Landau-Kleffner and continuous spike and waves during slow-wave sleep types: genomic dissection makes the link wi...
Epilepsy
ADHD
Support
Homozygous deletions implicate non-coding epigenetic marks in Autism spectrum disorder
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Support
Exome sequencing of Pakistani consanguineous families identifies 30 novel candidate genes for recessive intellectual disability.
ID
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Interaction between autism-linked MDGAs and neuroligins suppresses inhibitory synapse development.
Highly Cited
Identification and characterization of two novel brain-derived immunoglobulin superfamily members with a unique structural organization.
Recent Recommendation
Genomewide association analysis followed by a replication study implicates a novel candidate gene for neuroticism.
Neuroticism
Rare
Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
GEN156R014a
splice_site_variant
c.2232A>G
p.Arg744=
Familial
Both parents
Unknown
GEN156R016
frameshift_variant
c.-197_-196insTGAGTGTGTTTGTGCATGAGTGTGTG
Familial
Maternal
Multiplex (monozygotic twins)
Common
Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
GEN156C001
intron_variant
rs1959813
c.1883-5997G>A;c.1196-5997G>A;c.1886-5997G>A
US, German
Discovery
GEN156C002
intron_variant
rs3007105
c.2032-16192G>A;c.1345-16192G>A;c.2035-16192G>A
US, German
Discovery
GEN156C003
intron_variant
rs12883384
c.1883-14321T>G;c.1196-14321T>G;c.1886-14321T>G
US, German
Discovery
GEN156C004
intron_variant
rs7151262
c.1883-14814G>C;c.1196-14814G>C;c.1886-14814G>C
US, German
Discovery