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Relevance to Autism

Rare variants in the MDGA2 gene have been identified with autism (Bucan et al., 2009). In addition, MDGA2 has been found to have genetic association with neuroticism (van den Oord et al., 2008).

Molecular Function

The encoded protein is a member of the immunoglobulin domain cell adhesion molecule subfamily and and is proposed to be involved in regulating neuronal migration and axonal guidance

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Genome-wide analyses of exonic copy number variants in a family-based study point to novel autism susceptibility genes.
ASD
Support
Epileptic encephalopathies of the Landau-Kleffner and continuous spike and waves during slow-wave sleep types: genomic dissection makes the link wi...
Epilepsy
ADHD
Support
Homozygous deletions implicate non-coding epigenetic marks in Autism spectrum disorder
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Support
Exome sequencing of Pakistani consanguineous families identifies 30 novel candidate genes for recessive intellectual disability.
ID
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Interaction between autism-linked MDGAs and neuroligins suppresses inhibitory synapse development.
Highly Cited
Identification and characterization of two novel brain-derived immunoglobulin superfamily members with a unique structural organization.
Recent Recommendation
Genomewide association analysis followed by a replication study implicates a novel candidate gene for neuroticism.
Neuroticism

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN156R001 
 copy_number_loss 
  
  
  
  
 Multiplex 
 GEN156R002 
 copy_number_loss 
  
  
  
  
 Multiplex 
 GEN156R003 
 copy_number_loss 
  
  
  
  
 Multiplex 
 GEN156R004 
 copy_number_loss 
  
  
  
  
 Multiplex 
 GEN156R005 
 copy_number_loss 
  
  
  
  
 Multiplex 
 GEN156R006 
 copy_number_loss 
  
  
  
  
 Multiplex 
 GEN156R007 
 copy_number_loss 
  
  
  
  
 Multiplex 
 GEN156R008 
 copy_number_loss 
  
  
  
  
 Multiplex 
 GEN156R009 
 copy_number_loss 
  
  
  
  
 Multiplex 
 GEN156R010 
 copy_number_loss 
  
  
  
  
 Multiplex 
 GEN156R011 
 copy_number_loss 
  
  
  
  
 Multiplex 
 GEN156R012 
 copy_number_loss 
  
  
 De novo 
  
 Unknown 
 GEN156R013 
 missense_variant 
 c.2788G>A 
 p.Val930Ile 
 De novo 
  
  
 GEN156R014a 
 splice_site_variant 
 c.2232A>G 
 p.Arg744= 
 Familial 
 Both parents 
 Unknown 
 GEN156R015 
 frameshift_variant 
 c.-36_-33del 
  
 Familial 
 Paternal 
 Multiplex 
 GEN156R016 
 frameshift_variant 
 c.-197_-196insTGAGTGTGTTTGTGCATGAGTGTGTG 
  
 Familial 
 Maternal 
 Multiplex (monozygotic twins) 
 GEN156R017a 
 copy_number_loss 
  
  
 Familial 
 Both parents 
  

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN156C001 
 intron_variant 
 rs1959813 
 c.1883-5997G>A;c.1196-5997G>A;c.1886-5997G>A 
  
 US, German 
 Discovery 
 GEN156C002 
 intron_variant 
 rs3007105 
 c.2032-16192G>A;c.1345-16192G>A;c.2035-16192G>A 
  
 US, German 
 Discovery 
 GEN156C003 
 intron_variant 
 rs12883384 
 c.1883-14321T>G;c.1196-14321T>G;c.1886-14321T>G 
  
 US, German 
 Discovery 
 GEN156C004 
 intron_variant 
 rs7151262 
 c.1883-14814G>C;c.1196-14814G>C;c.1886-14814G>C 
  
 US, German 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
14
Deletion-Duplication
 5
 
14
Deletion-Duplication
 14
 

Model Summary

Homozygous Mdga2 knockout mice are perinatal lethal. Mdga2 heterozygous mice have increased asymmetric synapse density, mEPSC frequency and amplitude, and altered LTP, but no changes in inhibitory synapses. Mdga2 mice also demonstrate autism-like phenotype including stereotypy, aberrant social interactions, and impaired memory. The fMRI studies show Mdga2 heterozygous mice have increased cortical spontaneous actvity and intracortical functional connectivity. The abnormal cortical processing caused by Mdga2 deficiencies might result from the disruption of the Neurexin-Neuroligin interactions.

References

Type
Title
Author, Year
Additional
Altered Cortical Dynamics and Cognitive Function upon Haploinsufficiency of the Autism-Linked Excitatory Synaptic Suppressor MDGA2.
Primary
Altered Cortical Dynamics and Cognitive Function upon Haploinsufficiency of the Autism-Linked Excitatory Synaptic Suppressor MDGA2.

M_MDGA2_1_KO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: The coding sequence of the first exon is replaced by a LacZ-pA-PGK-Neo-pA cassette.
Allele Type: Targeted (Knock Out)
Strain of Origin: Not specified
Genetic Background: C57BL/6J
ES Cell Line: C57BL/6 and CBA (TT2)
Mutant ES Cell Line:
Model Source: Riken

M_MDGA2_1_KO_HT

Model Type: Genetic
Model Genotype: Heterozygous
Mutation: The coding sequence of the first exon is replaced by a LacZ-pA-PGK-Neo-pA cassette.
Allele Type: Targeted (Knock Out)
Strain of Origin: Not specified
Genetic Background: C57BL/6J
ES Cell Line: C57BL/6 and CBA (TT2)
Mutant ES Cell Line:
Model Source: Riken

M_MDGA2_1_KO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Mortality/lethality1
Increased
Description: Increased perinatal lethalty in mdga2 knockout mice with c57bl6 background
Exp Paradigm: Genotypic ratio of p14 progeny from heterozygous parents
 Genotypic ratio of progeny from heterozygous parents
 2 weeks
 Not Reported: Circadian sleep/wake cycle, Communications, Emotion, Immune response, Learning & memory, Maternal behavior, Molecular profile, Motor phenotype, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior

M_MDGA2_1_KO_HT

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
General locomotor activity1
Increased
Description: Mdga2 hets show slightly increased general locomotor activity relative to wild-type controls
Exp Paradigm: Home cage behavior: traveled distance
 Home cage behavior
 8-12 weeks
Synapse density: excitatory1
Increased
Description: Increased asymmetric (excitatory) synapse density in the ca1 stratum radiatum of mdga2 hets relative to wild-type controls
Exp Paradigm: Electron microscopy: hippocampal ca1 stratum radiatum
 Electron microscopy
 Adult
Functional magnetic resonance imaging: connectivity1
Increased
Description: Mdga2 hets exhibit enhanced functional connectivity than wild-type controls in lateral cortical areas encompassing secondary somatosensory cortices (hls2a, hls2b, fls2, and bcs2) and primary auditory cortex
Exp Paradigm: Functional magnetic resonance imaging (fmri)-resting state: voltage-sensitive dye (vsd) imaging: cross-correlation matrices of spontaneous activity from the rois
 Functional magnetic resonance imaging (fmri)-resting state
 Adult
Synaptic transmission: excitatory1
Increased
Description: Increased fepsp response to the stimulation in mdga2 hets relative to wild-type controls
Exp Paradigm: Field potential recordings versus the injected current intensity or measured presynaptic fiber volley amplitude: hippocampal sc-ca1 pathway (schaffer collateral axonal fibers - ca1)
 Field potential recordings
 6-10 weeks
Presynaptic function: vesicle recycling1
Decreased
Description: Mdga2 hets have no change in the depletion rate of the readily releasable vesicle pool but have increased depletion rate of reserve pool vesicles of the hippocampal neurons relative to wild-type controls
Exp Paradigm: Field potential recordings: hippocampal sc-ca1 pathway (schaffer collateral axonal fibers - ca1)
 Field potential recordings
 6-10 weeks
Functional magnetic resonance imaging1
Increased
Description: Mdga2 hets exhibit significantly higher levels of baseline activity than wild-type controls in posterior segment of secondary motor cortex (pm2), retrosplenial cortex (rs), primary motor cortex for c2 whisker (mbc), and forelimb motor cortex (mfl)
Exp Paradigm: Functional magnetic resonance imaging (fmri)-resting state: voltage-sensitive dye (vsd) imaging
 Functional magnetic resonance imaging (fmri)-resting state
 Adult
Synaptic plasticity: hippocampal ltp: late phase (l-ltp)1
Decreased
Description: Decreased late phase of ltp (l-ltp) measured in hets hippocampal sc-ca1 pathway relative to wild-type controls
Exp Paradigm: Field potential recordings: hippocampal sc-ca1 pathway (schaffer collateral axonal fibers - ca1): ltp induced by 4 x 100 hz stimuli applied 5 min apart
 Field potential recordings
 6-10 weeks
Miniature post synaptic current frequency: excitatory1
Increased
Description: Increased mepsc frequency in mdga2 hets relative to wild-type controls
Exp Paradigm: Whole-cell patch clamp: hippocampal ca1 pyramidal neurons
 Whole-cell patch clamp
 6-10 weeks
Synaptic plasticity: hippocampal ltp: early phase (e-ltp)1
Increased
Description: Increased early phase of ltp (e-ltp) in hets hippocampal sc-ca1 pathway relative to wild-type controls
Exp Paradigm: Field potential recordings: hippocampal sc-ca1 pathway (schaffer collateral axonal fibers - ca1): ltp induced by 1 x 100 hz stimulation
 Field potential recordings
 6-10 weeks
Miniature post synaptic current amplitude: excitatory1
Increased
Description: Increased mepsc amplitude in mdga2 hets relative to wild-type controls
Exp Paradigm: Whole-cell patch clamp: hippocampal ca1 pyramidal neurons
 Whole-cell patch clamp
 6-10 weeks
Synaptic neuroreceptor ratio (nmdar/ampar) dependent transmission1
Decreased
Description: Decreased ratio of nmdar- and ampar-dpendent (nmdar/ampar) transmisson in hets relative to wild-type controls
Exp Paradigm: Whole-cell patch clamp: ca1 pyramidal cells
 Whole-cell patch clamp
 6-10 weeks
Vertical jumping or back flipping1
Increased
Description: Increased repetitive jumping behavior in mdga2 hets relative to wild-type controls
Exp Paradigm: Home cage behavior
 Home cage behavior
 8-12 weeks
Social interaction1
Decreased
Description: Mdga2 hets have decreased social interactions relative to wild-type controls
Exp Paradigm: Interaction with caged adult
 Partition test
 8-12 weeks
Social approach1
Decreased
Description: Mdga2 hets have decreased social approach relative to wild-type controls
Exp Paradigm: Three-chamber social approach test: novel animal, empty cage
 Three-chamber social approach test
 8-12 weeks
Inanimate object preference1
Increased
Description: Mdga2 hets have increased inanimate object preference relative to wild-type controls
Exp Paradigm: Novel object exploration test: the time mice explored either one of the novel objects (different shapes) was calculated as a ratio of total time
 Novel object recognition test
 8-12 weeks
Object recognition memory1
Decreased
Description: Mdga2 hets show no preference for the novel object over a familiar object
Exp Paradigm: Novel object exploration test: fraction of time exploring the novel object at both 30 min and 24 hr after the training session
 Novel object recognition test
 8-12 weeks
Cued or contextual fear conditioning: memory of context: long term recall1
Decreased
Description: Mdga2 hets have decreased long term memory recall in contextual fear conditioning tests
Exp Paradigm: Fear conditioning test: contextual memory at 24 hours or 7 days after training
 Fear conditioning test
 8-12 weeks
Spatial reference memory1
Decreased
Description: Mdga2 hets have decreased spatial reference memory relative to wild-type controls
Exp Paradigm: Morris water maze test: probe trial
 Morris water maze test
 8-12 weeks
Spatial learning1
Decreased
Description: Mdga2 hets display impaired spatial learning with normal willingness and swim ability
Exp Paradigm: Morris water maze test: hidden-platform
 Morris water maze test
 8-12 weeks
Protein expression level evidence1
Increased
Description: Increased protein levels of psd-95 family maguks or nlgn1 in the ca1 and pfc or ca1 of mdga2 hets, respectively, relative to the wild-type littermate controls
Exp Paradigm: Western blot: ca1: maguks, nlgn1; western blot: pfc: maguks
 Western blot
 Adult
Cued or contextual fear conditioning: memory of context1
 No change
 Fear conditioning test
 8-12 weeks
Protein expression level evidence1
 No change
 Western blot
 Adult
Motor coordination and balance1
 No change
 Accelerating rotarod test
 8-12 weeks
Motor coordination and balance1
 No change
 Fixed bar test
 8-12 weeks
Dendritic architecture: spine morphology1
 No change
 Electron microscopy
 Adult
Post-synaptic density size: excitatory synapses1
 No change
 Electron microscopy
 Adult
Synapse density: excitatory1
 No change
 Electron microscopy
 Adult
Synapse density: inhibitory1
 No change
 Electron microscopy
 Adult
Synaptic morphology1
 No change
 Electron microscopy
 Adult
Miniature post synaptic current amplitude: inhibitory1
 No change
 Whole-cell patch clamp
 6-10 weeks
Miniature post synaptic current frequency: inhibitory1
 No change
 Whole-cell patch clamp
 6-10 weeks
Presynaptic function: paired-pulse facilitation1
 No change
 Field potential recordings
 6-10 weeks
Vision1
 No change
 Morris water maze test
 8-12 weeks
 Not Reported: Circadian sleep/wake cycle, Communications, Developmental profile, Emotion, Immune response, Maternal behavior, Physiological parameters, Seizure


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
FMR1 fragile X mental retardation 1 2332 G8JLE9 PAR-CLIP
Ascano M Jr , et al. 2012

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