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Relevance to Autism

A two-stage analysis of rare de novo and inherited coding variants in 42,607 ASD cases, including 35,130 new cases for the SPARK cohort, in Zhou et al., 2022 identified MARK2 as a gene reaching exome-wide significance (P < 2.5E-06); association of MARK2 with ASD risk was primarily driven by de novo variants. A de novo missense variant in MARK2 was also identified in an ASD proband from the SAGE cohort in Guo et al., 2019.

Molecular Function

This gene encodes a member of the Par-1 family of serine/threonine protein kinases. The protein is an important regulator of cell polarity in epithelial and neuronal cells, and also controls the stability of microtubules through phosphorylation and inactivation of several microtubule-associating proteins. The protein localizes to cell membranes.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Integrating de novo and inherited variants in 42
ASD
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Genome sequencing identifies multiple deleterious variants in autism patients with more severe phenotypes.
ASD
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1348R001 
 missense_variant 
 c.500A>C 
 p.His167Pro 
 De novo 
  
  
 GEN1348R002 
 synonymous_variant 
 c.289C>T 
 p.Leu97%3D 
 De novo 
  
 Simplex 
 GEN1348R003 
 frameshift_variant 
 c.699del 
 p.Trp234GlyfsTer3 
 De novo 
  
 Simplex 
 GEN1348R004 
 frameshift_variant 
 c.1002del 
 p.Met335TrpfsTer20 
 De novo 
  
 Simplex 
 GEN1348R005 
 stop_gained 
 c.211C>T 
 p.Arg71Ter 
 De novo 
  
  
 GEN1348R006 
 missense_variant 
 c.403G>A 
 p.Gly135Arg 
 De novo 
  
  
 GEN1348R007 
 missense_variant 
 c.2029G>A 
 p.Gly677Ser 
 De novo 
  
  
 GEN1348R008 
 splice_site_variant 
 c.404-2A>C 
  
 De novo 
  
  
 GEN1348R009 
 stop_gained 
 c.457C>T 
 p.Arg153Ter 
 De novo 
  
  
 GEN1348R010 
 missense_variant 
 c.691G>A 
 p.Val231Met 
 De novo 
  
  
 GEN1348R011 
 splice_region_variant 
 c.1416+8G>C 
  
 De novo 
  
  
 GEN1348R012 
 splice_site_variant 
 c.1934+1G>A 
  
 De novo 
  
  
 GEN1348R013 
 stop_gained 
 c.688G>T 
 p.Glu230Ter 
 Familial 
 Maternal 
  
 GEN1348R014 
 stop_gained 
 c.1807C>T 
 p.Arg603Ter 
 Familial 
 Paternal 
  
 GEN1348R015 
 frameshift_variant 
 c.179del 
 p.Gly60AlafsTer8 
 Familial 
 Paternal 
  
 GEN1348R016 
 splice_site_variant 
 c.1677-1G>C 
  
 Unknown 
 Not paternal 
  
 GEN1348R017 
 missense_variant 
 c.2029G>A 
 p.Gly677Ser 
 De novo 
  
 Unknown 
 GEN1348R018 
 frameshift_variant 
 c.1426del 
 p.Leu476SerfsTer31 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model

No Animal Model Data Available

 

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