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Relevance to Autism

This gene was identified as a novel ASD candidate gene in Gonzalez-Mantilla et al., 2016 based on the presence of two potentially pathogenic loss-of-function variants in ASD cases (single gene deletions of unknown origin in probands from AGRE and the Simons Simplex Collection in Gai et al., 2012 and Girirajan et al., 2013, respectively).

Molecular Function

May be involved in coupling signal transduction and vesicle trafficking to enable polarized secretion and/or membrane deposition of immune effector molecules.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Rare structural variation of synapse and neurotransmission genes in autism.
ASD
Support
Targeted sequencing and functional analysis reveal brain-size-related genes and their networks in autism spectrum disorders.
ASD
Support
Refinement and discovery of new hotspots of copy-number variation associated with autism spectrum disorder.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD
Support
Phenotype-to-genotype approach reveals head-circumference-associated genes in an autism spectrum disorder cohort.
ASD
Macrocephaly
Support
Exonic Mosaic Mutations Contribute Risk for Autism Spectrum Disorder.
ASD
Recent Recommendation
A Cross-Disorder Method to Identify Novel Candidate Genes for Developmental Brain Disorders.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN802R001 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN802R002 
 copy_number_loss 
  
  
 Unknown 
  
 Simplex 
 GEN802R003 
 frameshift_variant 
 c.2591_2592del 
 p.Ser864CysfsTer13 
 Familial 
  
 Simplex 
 GEN802R004 
 missense_variant 
 c.412C>T 
 p.Leu138Phe 
 Familial 
  
 Simplex 
 GEN802R005 
 missense_variant 
 c.5492G>A 
 p.Gly1831Glu 
 Familial 
  
 Simplex 
 GEN802R006 
 missense_variant 
 c.5809C>T 
 p.His1937Tyr 
 Familial 
  
 Simplex 
 GEN802R007 
 missense_variant 
 c.6363A>C 
 p.Lys2121Asn 
 Familial 
  
 Simplex 
 GEN802R008 
 missense_variant 
 c.6659C>T 
 p.Thr2220Met 
 Familial 
  
 Simplex 
 GEN802R009 
 missense_variant 
 c.6659C>T 
 p.Thr2220Met 
 Familial 
  
 Simplex 
 GEN802R010 
 missense_variant 
 c.7196C>T 
 p.Thr2399Ile 
 Familial 
  
 Simplex 
 GEN802R011 
 missense_variant 
 c.7286C>T 
 p.Ala2429Val 
 Familial 
  
 Simplex 
 GEN802R012 
 missense_variant 
 c.7888G>A 
 p.Val2630Ile 
 Familial 
  
 Simplex 
 GEN802R013 
 missense_variant 
 c.8084C>T 
 p.Ala2695Val 
 Familial 
  
 Simplex 
 GEN802R014 
 missense_variant 
 c.4788C>A 
 p.Ser1596Arg 
 De novo 
  
 Simplex 
 GEN802R015 
 frameshift_variant 
 c.4427del 
 p.His1476LeufsTer6 
 Familial 
 Maternal 
 Simplex 
 GEN802R016 
 missense_variant 
 c.8458T>C 
 p.Cys2820Arg 
 Unknown 
  
  
 GEN802R017 
 missense_variant 
 c.8083G>A 
 p.Gly2695Ser 
 De novo 
  
  
 GEN802R018 
 synonymous_variant 
 c.4920G>A 
 p.Val1640%3D 
 De novo 
  
  
 GEN802R019 
 missense_variant 
 c.7042C>G 
 p.Arg2348Gly 
 De novo 
  
  
 GEN802R020 
 synonymous_variant 
 c.8550C>T 
 p.Asn2850%3D 
 De novo 
  
  
 GEN802R021 
 stop_gained 
 c.2020G>T 
 p.Glu674Ter 
 Familial 
 Paternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
4
Duplication
 1
 
4
Duplication
 1
 
4
Duplication
 1
 
4
Duplication
 1
 
4
Duplication
 1
 
4
Deletion
 1
 
4
Duplication
 1
 
4
Duplication
 2
 
4
Deletion-Duplication
 15
 

No Animal Model Data Available

 

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