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Relevance to Autism

Whole-exome sequencing of 115 ASD trios from three countries with a high frequency of consanguineous populations (Pakistan, Iran, and Saudi Arabia) in Harripaul et al., 2026 identified a homozygous missense variant in the KSR2 gene (NM_173598.6:c.763C>T;p.Arg255Trp) in a male ASD proband from Iran. De novo variants in this gene, including a de novo loss-of-function variant, have been reported in ASD probands from the SPARK cohort and a Chinese ASD cohort (Zhou et al., 2022; Trost et al., 2022; Wang et al., 2023; Avila et al., 2026).

Molecular Function

Enables protein serine/threonine kinase activity. Predicted to be involved in Ras protein signal transduction; calcium-mediated signaling; and positive regulation of cold-induced thermogenesis. Predicted to act upstream of or within positive regulation of MAPK cascade. Predicted to be located in membrane. Predicted to be active in cytosol and plasma membrane.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Autism spectrum disorder trios from consanguineous populations are enriched for rare homozygous variants, identifying 32 new candidate genes.
ASD
Support
Deleterious coding variation associated with autism is shared across ancestries.
ASD
Support
Genomic architecture of autism from comprehensive whole-genome sequence annotation
ASD
Support
Integrating de novo and inherited variants in 42
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1550R001a 
 missense_variant 
 c.763C>T 
 p.Arg255Trp 
 Familial 
 Both parents 
 Simplex 
 GEN1550R002 
 frameshift_variant 
 c.1600_1601delinsA 
 p.Pro534ThrfsTer63 
 De novo 
  
 Simplex 
 GEN1550R003 
 missense_variant 
 c.1463G>A 
 p.Arg488His 
 De novo 
  
 Simplex 
 GEN1550R004 
 missense_variant 
 c.1600C>A 
 p.Pro534Thr 
 De novo 
  
 Simplex 
 GEN1550R005 
 synonymous_variant 
 c.1755G>A 
 p.Pro585= 
 De novo 
  
 Simplex 
 GEN1550R006 
 missense_variant 
 c.403G>A 
 p.Gly135Arg 
 De novo 
  
 Simplex 
 GEN1550R007 
 missense_variant 
 c.2108C>T 
 p.Pro703Leu 
 De novo 
  
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
12
Duplication
 1
 
12
Duplication
 1
 
12
Duplication
 3
 
12
Duplication
 1
 

No Animal Model Data Available

 

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