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Relevance to Autism

This gene was originally identified as an ASD candidate gene based on its enrichment in an autism-associated protein interaction module. Sequencing of post-mortem brain tissue from 25 ASD cases resulted in the identification of significant non-synonymous variants in this gene with an expected false-positive rate at 0.1, confirming the involvement of this module with autism; this finding was further validated by exome sequencing of an independent cohort of 505 ASD cases and 491 controls (Li et al., 2014).

Molecular Function

The protein encoded by this gene is involved in reorganization of the cortical cytoskeleton and regulates axon formation by promoting the formation of extra axons. It may also be functionally important for the intracellular trafficking of MAGUKs and associated protein complexes.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Integrated systems analysis reveals a molecular network underlying autism spectrum disorders.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN688R001 
 nonsynonymous_variant 
  
  
 Unknown 
  
 Unknown 
 GEN688R002 
 missense_variant 
 c.4411G>A 
 p.Val1471Ile 
 Unknown 
  
 Unknown 
 GEN688R003 
 nonsynonymous_variant 
  
  
 Unknown 
  
 Unknown 
 GEN688R004 
 missense_variant 
 c.1882C>T 
 p.Arg628Cys 
 De novo 
  
 Simplex 
 GEN688R006 
 missense_variant 
 c.3596C>G 
 p.Thr1199Ser 
 De novo 
  
  
 GEN688R007 
 synonymous_variant 
 c.831C>T 
 p.Asn277%3D 
 De novo 
  
  
 GEN688R008 
 missense_variant 
 c.2342G>A 
 p.Arg781Gln 
 De novo 
  
  
 GEN688R009 
 missense_variant 
 c.4598C>T 
 p.Ala1533Val 
 De novo 
  
 Multiplex 
 GEN688R010 
 missense_variant 
 c.2878C>T 
 p.Arg960Trp 
 De novo 
  
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
8
Deletion
 2
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 5
 
8
Duplication
 3
 
8
Duplication
 5
 
8
Duplication
 2
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 1
 

No Animal Model Data Available

 

No Interactions Available
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