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Relevance to Autism

Rare mutations in the KCNJ10 gene have been identified with autism (Sicca et al., 2011). In particular, that study found two non-synonymous SNPs (P18Q and V84M) in unrelated individuals with a seizure disorder who also have ASD and ID. Both of these mutations were shown to be functional in heterologous systems. In addition, genetic association has been found between KCNJ10 and seizure susceptibility in patients with epilepsy (Buono et al., 2004).

Molecular Function

This gene encodes a member of the inward rectifier-type potassium channel family, characterized by having a greater tendency to allow potassium to flow into, rather than out of, a cell. The encoded protein may form a heterodimer with another potassium channel protein and may be responsible for the potassium buffering action of glial cells in the brain. Mutations in this gene have been associated with seizure susceptibility of common idiopathic generalized epilepsy syndromes.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Autism with seizures and intellectual disability: possible causative role of gain-of-function of the inwardly-rectifying K channel Kir4.1.
ASD
Positive Association
Association study between inwardly rectifying potassium channels 2.1 and 4.1 and autism spectrum disorders.
ASD
Support
Gain-of-function defects of astrocytic Kir4.1 channels in children with autism spectrum disorders and epilepsy.
ASD, epilepsy
Support
Exome sequencing of ion channel genes reveals complex profiles confounding personal risk assessment in epilepsy.
Epilepsy
Support
Epilepsy/seizures
DD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Clinical exome sequencing: results from 2819 samples reflecting 1000 families.
SESAME syndrome
ID, epilepsy/seizures
Highly Cited
Association between variation in the human KCNJ10 potassium ion channel gene and seizure susceptibility.
Epilepsy
Highly Cited
Fine mapping of a seizure susceptibility locus on mouse Chromosome 1: nomination of Kcnj10 as a causative gene.
Recent Recommendation
Altered electroretinograms in patients with KCNJ10 mutations and EAST syndrome.
Recent Recommendation
Integrated systems analysis reveals a molecular network underlying autism spectrum disorders.
ASD
Recent Recommendation
Down-regulation of Kir4.1 in the cerebral cortex of rats with liver failure and in cultured astrocytes treated with glutamine: Implications for ast...
Recent Recommendation
The disruption of central CO2 chemosensitivity in a mouse model of Rett syndrome.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN140R001 
 missense_variant 
 c.53G>A 
 p.Arg18Gln 
 Familial 
 Maternal 
 Multiplex 
 GEN140R002 
 missense_variant 
 c.250G>A 
 p.Val84Met 
 Familial 
 Maternal 
 Simplex 
 GEN140R003 
 synonymous_variant 
 c.1092A>G 
 p.Gln364= 
 Unknown 
  
 Unknown 
 GEN140R004 
 missense_variant 
 c.53G>A 
 p.Arg18Gln 
 Unknown 
  
 Unknown 
 GEN140R005 
 missense_variant 
 c.52C>T 
 p.Arg18Trp 
 Unknown 
  
 Unknown 
 GEN140R006 
 missense_variant 
 c.53G>A 
 p.Arg18Gln 
 Familial 
 Paternal 
 Simplex 
 GEN140R007 
 missense_variant 
 c.53G>A 
 p.Arg18Gln 
 Familial 
 Paternal 
 Simplex 
 GEN140R008 
 missense_variant 
 c.53G>A 
 p.Arg18Gln 
 Familial 
 Maternal 
 Simplex 
 GEN140R009 
 missense_variant 
 c.53G>A 
 p.Arg18Gln 
 Familial 
 Maternal 
 Simplex 
 GEN140R010 
 missense_variant 
 c.53G>A 
 p.Arg18Gln 
 Unknown 
  
 Simplex 
 GEN140R011 
 missense_variant 
 c.1043G>A 
 p.Arg348His 
 Familial 
 Paternal 
 Simplex 
 GEN140R012a 
 missense_variant 
 c.170C>T 
 p.Thr57Ile 
 Familial 
 Both parents 
  
 GEN140R013 
 missense_variant 
 c.994C>A 
 p.Gln332Lys 
 De novo 
  
  
 GEN140R014 
 synonymous_variant 
 c.660C>T 
 p.Thr220%3D 
 De novo 
  
  
 GEN140R015a 
 stop_gained 
 c.76C>T 
 p.Arg26Ter 
 Familial 
 Both parents 
  
  et al.  

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN140C001 
 missense_variant 
 rs1130183 
 c.811C>T 
 p.Arg271Cys 
 US, German 
 Discovery 
 GEN140C002 
 intron_variant 
 rs1186689 
 c.1-10731C>A 
  
 269 Chinese children with ASD, 243 unrelated healthy controls 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
1
Duplication
 44
 
1
Duplication
 1
 
1
Duplication
 1
 
1
Deletion
 1
 

Model Summary

Transient knockdown of kcnj10a through morpholino -based technology leads to dilation of the pronephric duct, reduction of the size of the swim bladder and increases in spontaneous tail flicks in 30 hpf morphants, commonly linked to neuronal hyperexcitability. Loss-of-function of Kir4.1 channels in zebrafish recapitulate the human behavioral phenotypes including epilepsy. Co-injection of embryos with kcnj10a MO and equimolar amounts of either wildtype or individual mutated human KCNJ10 mRNA (R271C, R18Q, V84M, R348H, R18Q) led to variant specific outcomes. WT and the R271C mRNA rescued the number of spontaneous tail flicks to basal levels. However the R18Q, V84M, R348H mutant human KCNJ10 mRNA could not complement the disease phenotype. WT embryos over-expressing R18Q alone or with WT human mRNA showed abnormal locomotion.

References

Type
Title
Author, Year
Primary
Gain-of-function defects of astrocytic Kir4.1 channels in children with autism spectrum disorders and epilepsy.

Z_KCNJ10_1_KD

Model Type: Genetic
Model Genotype: Wild type
Mutation: Morpholino targeting the splice junction of kcnj101 were injected into one- to two-cell stage embryos to knock down kcnj10 expression in zebrafish.
Allele Type: Targeted
Strain of Origin:
Genetic Background:
ES Cell Line:
Mutant ES Cell Line:
Model Source:

Z_KCNJ10_2_WT_R18Q-KIR4.1

Model Type: Genetic
Model Genotype: Wild type
Mutation: Wildtype zebrafish embryos were injected with R18Q over-expresssing cRNA.
Allele Type: Targeted
Strain of Origin:
Genetic Background:
ES Cell Line:
Mutant ES Cell Line:
Model Source:

Z_KCNJ10_1_KD

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Stereotypy1
Increased
Description: Mutants show an increase in the number of spontaneous tail flicks compared to wildtype controls.
 Observation of repetitive behavior
 30 hpf
Urinary system development1
Abnormal
Description: Mutants show dilated pronephric duct compared to wildtype controls.
Exp Paradigm: Macroscopic analysis
 Macroscopic analysis
 30 hpf
Respiratory system development1
Abnormal
Description: Mutants show an underdeveloped swim bladder compared to wildtype controls.
Exp Paradigm: Macroscopic analysis
 Macroscopic analysis
 30 hpf
 Not Reported: Circadian sleep/wake cycle, Communications, Emotion, Immune response, Learning & memory, Maternal behavior, Molecular profile, Motor phenotype, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Seizure, Sensory, Social behavior

Z_KCNJ10_2_WT_R18Q-KIR4.1

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Stereotypy1
Increased
Description: Mutants show an increase in the number of spontaneous tail flicks compared to wildtype controls.
 Observation of repetitive behavior
 30 hpf
 Not Reported: Circadian sleep/wake cycle, Communications, Developmental profile, Emotion, Immune response, Learning & memory, Maternal behavior, Molecular profile, Motor phenotype, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Seizure, Sensory, Social behavior


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
ADO 2-aminoethanethiol (cysteamine) dioxygenase 84890 B3KXN9 IP; LC-MS/MS
Huttlin EL , et al. 2015
APP amyloid beta (A4) precursor protein 351 P05067 Protein-fragment complementation assay
Olh J , et al. 2011
CASR calcium-sensing receptor 846 P41180 Y2H; IP/WB
Huang C , et al. 2006
CAV1 caveolin 1, caveolae protein, 22kDa 857 Q03135 IP/WB
Cha SK , et al. 2010
DLG1 discs, large homolog 1 (Drosophila) 1739 Q12959 in silico target prediction
Horio Y , et al. 1997
DLG4 DLG4discs, large homolog 4 (Drosophila) 1742 P78352 GST; IP/WB
Horio Y , et al. 1997
HSPA4 heat shock 70kDa protein 4 3308 P34932 IP; LC-MS/MS
Huttlin EL , et al. 2015
HSPA8 heat shock 70kDa protein 8 3312 P11142 IP; LC-MS/MS
Huttlin EL , et al. 2015
KCNJ10 potassium inwardly-rectifying channel, subfamily J, member 10 3766 P78508 IP/WB
Jin X , et al. 2012
KCNJ16 potassium inwardly-rectifying channel, subfamily J, member 16 3773 Q9NPI9 IP/WB
Tanemoto M , et al. 2000
SIAH1 seven in absentia homolog 1 (Drosophila) 6477 Q8IUQ4 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
SNTA1 syntrophin, alpha 1 6640 Q13424 SPOT synthesis/peptide array
Boisguerin P , et al. 2004
TMED8 transmembrane emp24 protein transport domain containing 8 283578 Q6PL24 IP; LC-MS/MS
Huttlin EL , et al. 2015
YTHDF1 YTH domain family, member 1 54915 Q9BYJ9 IP; LC-MS/MS
Huttlin EL , et al. 2015
DLG4 Postsynaptic density protein 95 13385 Q62108 IP; LC-MS/MS
Frank RA , et al. 2016
Il16 interleukin 16 16170 O54824 Y2H; GST
Kurschner C and Yuzaki M 1999
Inadl InaD-like (Drosophila) 12695 Q63ZW7 Y2H; IP/WB; GST
Kurschner C , et al. 1998
DMD dystrophin 24907 P11530 GST
Leonoudakis D , et al. 2004
Mlc1 megalencephalic leukoencephalopathy with subcortical cysts 1 315215 D4ABB2 GST
Lanciotti A , et al. 2009

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