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Relevance to Autism

A de novo frameshift variant in the KATNAL1 gene was identified by whole-genome sequencing in an ASD proband from a simplex family from the ASD: Genomes to Outcome Study cohort in Yuen et al., 2017. A mouse line with a loss-of-function missense mutation in the Katnal1 gene was shown in Banks et al., 2017 to exhibit behavioral deficits including decreased ultrasonic vocalizations, circadian rhythm and sleep anomalies, deficits in learning and memory, and hyperactivity, as well as defects in both neuronal migration and morphology and motile cilia of the ependymal lining of the lateral ventricle.

Molecular Function

Regulates microtubule dynamics in Sertoli cells, a process that is essential for spermiogenesis and male fertility. Severs microtubules in an ATP-dependent manner, promoting rapid reorganization of cellular microtubule arrays.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Recent Recommendation
A missense mutation in Katnal1 underlies behavioural, neurological and ciliary anomalies.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN904R001 
 frameshift_variant 
 c.597_598del 
 p.Ser200GlnfsTer4 
 De novo 
  
 Simplex 
 GEN904R002 
 missense_variant 
 c.19T>G 
 p.Cys7Gly 
 De novo 
  
  
 GEN904R003 
 frameshift_variant 
 c.401del 
 p.Gly134AspfsTer3 
 Familial 
 Maternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
13
Duplication
 1
 
13
Deletion
 1
 
13
Duplication
 1
 
13
Duplication
 2
 
13
N/A
 1
 
13
Deletion
 1
 
13
Duplication
 2
 
13
Deletion-Duplication
 6
 
13
Deletion
 2
 
13
Deletion
 2
 

No Animal Model Data Available

 

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