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Relevance to Autism

Gillentine et al., 2021 reported six previously unpublished individuals with likely gene-disruptive (LGD) variants in the HNRNPUL2 gene, including three ASD probands from the SPARK cohort with de novo LGD variants; neurodevelopmental abnormalities (developmental delay, intellectual disability, and/or specific learning disability), motor delay, delayed speech and language development or speech articulation difficulties, behavioral abnormalities, and autism spectrum disorder were frequently observed in this cohort. A de novo missense variant in this gene had previously been identified in an ASD proband from the Simons Simplex Collection (Iossifov et al., 2014). A two-stage analysis of rare de novo and inherited coding variants in 42,607 ASD cases, including 35,130 new cases for the SPARK cohort, in Zhou et al., 2022 identified HNRNPUL2 as a gene reaching exome-wide significance (P < 2.5E-06); association of HNRNPUL2 with ASD risk was primarily driven by de novo variants.

Molecular Function

Enables RNA binding activity. Located in nucleoplasm

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Rare deleterious mutations of HNRNP genes result in shared neurodevelopmental disorders
ASD, DD
ADHD, epilepsy/seizures
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Recent Recommendation
Integrating de novo and inherited variants in 42
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1249R001 
 missense_variant 
 c.971G>A 
 p.Arg324His 
 De novo 
  
 Simplex 
 GEN1249R002 
 stop_gained 
 c.642C>A 
 p.Tyr214Ter 
 De novo 
  
  
 GEN1249R003 
 frameshift_variant 
 c.1001dup 
 p.Tyr334Ter 
 De novo 
  
  
 GEN1249R004 
 stop_gained 
 c.1522C>T 
 p.Arg508Ter 
 Unknown 
  
  
 GEN1249R005 
 frameshift_variant 
 c.1716del 
 p.Arg572SerfsTer4 
 De novo 
  
  
 GEN1249R006 
 frameshift_variant 
 c.1906del 
 p.Ser636ProfsTer123 
 De novo 
  
  
 GEN1249R007 
 frameshift_variant 
 c.2141_2142del 
 p.Tyr714LeufsTer70 
 De novo 
  
  
 GEN1249R008 
 missense_variant 
 c.343G>A 
 p.Glu115Lys 
 Unknown 
  
  
 GEN1249R009 
 frameshift_variant 
 c.1373del 
 p.Val458GlyfsTer13 
 Familial 
 Paternal 
 Multiplex 
 GEN1249R010 
 stop_gained 
 c.1936C>T 
 p.Arg646Ter 
 Familial 
 Maternal 
  
 GEN1249R011 
 frameshift_variant 
 c.2052_2053del 
 p.Gly686LeufsTer3 
 Familial 
 Maternal 
  
 GEN1249R012 
 frameshift_variant 
 c.829_830insGTCCCTTTGGTCTGGGGCAAGGA 
 p.Leu277ProfsTer19 
 Unknown 
 Not maternal 
  
 GEN1249R013 
 stop_gained 
 c.1351G>T 
 p.Glu451Ter 
 Unknown 
  
  
 GEN1249R014 
 frameshift_variant 
 c.834del 
 p.Trp278CysfsTer10 
 Unknown 
  
  
 GEN1249R015 
 frameshift_variant 
 c.2052_2053del 
 p.Gly686LeufsTer3 
 Unknown 
  
  
 GEN1249R016 
 frameshift_variant 
 c.2077del 
 p.Arg693AspfsTer66 
 Unknown 
  
  
 GEN1249R017 
 stop_gained 
 c.1216A>T 
 p.Lys406Ter 
 Unknown 
  
  
 GEN1249R018 
 frameshift_variant 
 c.1829_1830del 
 p.Tyr610TrpfsTer14 
 Unknown 
  
  
 GEN1249R019 
 stop_gained 
 c.1015C>T 
 p.Arg339Ter 
 Unknown 
  
  
 GEN1249R020 
 stop_gained 
 c.2077C>T 
 p.Arg693Ter 
 Unknown 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
11
Deletion-Duplication
 11
 

No Animal Model Data Available

 

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