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Relevance to Autism

Duijkers et al., 2019 reported four individuals with de novo variants in the HNRNPR gene that presented with multisystem developmental defects including abnormalities of the brain and skeleton, dysmorphic facies, brachydactyly, seizures, and hypoplastic external genitalia; stereotypic movements were observed in two of these individuals, while autism spectrum disorder (pervasive developmental disorder) in addition to stereotypic movements was reported in a third. Gillentine et al., 2021 reported five previously unpublished individuals with HNRNPR variants; autism spectrum disorder was reported in two of these individuals, while autistic traits was reported in a third. De novo missense variants in HNRNPR have also been identified in ASD probands from the Autism Sequencing Consortium (De Rubeis et al., 2014) and the Simons Simplex Collection (Satterstrom et al., 2020).

Molecular Function

This gene encodes an RNA-binding protein that is a member of the spliceosome C complex, which functions in pre-mRNA processing and transport. The encoded protein also promotes transcription at the c-fos gene.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
HNRNPR Variants that Impair Homeobox Gene Expression Drive Developmental Disorders in Humans
DD, epilepsy/seizures
ASD, ADHD, stereotypy
Support
Diagnostic exome sequencing provides a molecular diagnosis for a significant proportion of patients with epilepsy
Epilepsy/seizures
DD
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Recent Recommendation
Rare deleterious mutations of HNRNP genes result in shared neurodevelopmental disorders
DD
ASD or autistic features, ADHD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1248R001 
 stop_gained 
 c.1663C>T 
 p.Gln555Ter 
 De novo 
  
  
 GEN1248R002 
 frameshift_variant 
 c.1307dup 
 p.Pro437ThrfsTer6 
 De novo 
  
  
 GEN1248R003 
 frameshift_variant 
 c.1652dupG 
 p.Pro552SerfsTer34 
 De novo 
  
  
 GEN1248R004 
 frameshift_variant 
 c.1350dup 
 p.Gln451ThrfsTer31 
 De novo 
  
  
 GEN1248R005 
 missense_variant 
 c.1763G>A 
 p.Arg588His 
 De novo 
  
  
 GEN1248R006 
 splice_site_variant 
 c.195+1G>T 
  
 De novo 
  
  
 GEN1248R007 
 missense_variant 
 c.1706A>G 
 p.Tyr465Cys 
 Unknown 
  
  
 GEN1248R008 
 frameshift_variant 
 c.1324dup 
 p.Arg442LysfsTer40 
 Unknown 
  
  
 GEN1248R009 
 missense_variant 
 c.1763G>A 
 p.Arg588His 
 De novo 
  
  
 GEN1248R010 
 missense_variant 
 c.1763G>A 
 p.Arg588His 
 De novo 
  
  
 GEN1248R011 
 missense_variant 
 c.1702C>T 
 p.Arg568Cys 
 De novo 
  
  
 GEN1248R012 
 missense_variant 
 c.1548G>C 
 p.Arg516Ser 
 De novo 
  
 Simplex 
 GEN1248R013 
 missense_variant 
 c.1354C>T 
 p.Arg452Trp 
 De novo 
  
 Multiplex 
 GEN1248R014 
 missense_variant 
 c.548C>T 
 p.Pro183Leu 
 De novo 
  
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model

No Animal Model Data Available

 

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