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Relevance to Autism

To evaluate the effects of ASD-associated de novo variants in a family relative context, Kim et al., 2025 defined within-family standardized deviations (WFSD) by subtracting phenotype scores of unaffected family members and standardizing the result in 21,735 families from three ASD cohorts (the Korean Autism cohort, the Simons Simplex Collection, and SPARK); their analysis found that more genes enriched in de novo damaging protein-truncating variants (LOEUF < 0.37) and missense variants (MPC > 2) were identified using WFSD compared to raw phenotype scores, with 38 genes uniquely identified in the WFSD group, including the HNRNPL gene. Zhou et al., 2022 reported a de novo loss-of-function variant in the HNRNPL gene in an SSC proband and a likely deleterious de novo missense variant in this gene in a MSSNG proband (Zhou et al., 2022).

Molecular Function

Heterogeneous nuclear RNAs (hnRNAs) which include mRNA precursors and mature mRNAs are associated with specific proteins to form heterogenous ribonucleoprotein (hnRNP) complexes. Heterogeneous nuclear ribonucleoprotein L is among the proteins that are stably associated with hnRNP complexes and along with other hnRNP proteins is likely to play a major role in the formation, packaging, processing, and function of mRNA. Heterogeneous nuclear ribonucleoprotein L is present in the nucleoplasm as part of the HNRP complex. HNRP proteins have also been identified outside of the nucleoplasm. Exchange of hnRNP for mRNA-binding proteins accompanies transport of mRNA from the nucleus to the cytoplasm. Since HNRP proteins have been shown to shuttle between the nucleus and the cytoplasm, it is possible that they also have cytoplasmic functions.

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References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Evaluation of familial phenotype deviation to measure the impact of de novo mutations in autism
ASD
Support
Integrating de novo and inherited variants in 42
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1518R001 
 frameshift_variant 
 c.116_122del 
 p.Gly39GlufsTer69 
 De novo 
  
 Simplex 
 GEN1518R002 
 missense_variant 
 c.365T>C 
 p.Leu122Ser 
 De novo 
  
 Simplex 
 GEN1518R003 
 splice_region_variant 
 c.624+4C>T 
 p.? 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
19
Duplication
 1
 
19
Deletion-Duplication
 19
 

No Animal Model Data Available

 

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