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Relevance to Autism

Evaluation of a 14bp insertion/deletion polymorphism (14bp+) in the 3'UTR of the HLA-G gene in a cohort of Italian families with ASD children showed that the frequency of both homozygous 14bp+/14bp+ genotype and 14bp+ allele was significantly higher in ASD children and their mothers compared to controls (p < 0.05 in all cases), and that the 14bp+ allele was more frequently transmitted to ASD children and preferentially not transmitted to non-ASD siblings [p=0.02, Odds ratio 2.6 (95% CI 1.1-6.4)] (Guerini et al., 2015). Evaluation of allelic polymorphism in exons 2, 3, and 4 in the HLA-G gene in a cohort of Italian ASD children, their mothers, and unaffected siblings, as well as in a cohort of combined controls, determined that the HLA-G*01:05N polymorphism was significantly more frequently observed in ASD children compared to combined controls (corrected P-value 5.0E-03; OR 7.3, 95% CI 2.4-26.5) (Guerini et al., 2017).

Molecular Function

Involved in the presentation of foreign antigens to the immune system. Plays a role in maternal tolerance of the fetus by mediating protection from the deleterious effects of natural killer cells, cytotoxic T-lymphocytes, macrophages and mononuclear cells.

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References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
An HLA-G()14bp insertion/deletion polymorphism associates with the development of autistic spectrum disorders.
ASD
Positive Association
HLA-G allelic distribution in Sardinian children with Autism spectrum disorders: A replication study.
ASD
Positive Association
HLA-G coding region polymorphism is skewed in autistic spectrum disorders.
ASD
Support
HLA-G14bp insertion and the KIR2DS1-HLAC2 complex impact on behavioral impairment in children with Autism Spectrum Disorders.
ASD

Rare

No Rare Variants Available

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN973C001 
 3_prime_UTR_variant 
 rs371194629 
 c.*65_*66insATTTGTTCATGCCT 
  
 71 Italian families with a total of 248 individuals (74 ASD children, 71 mothers, 64 fathers, and 39 non-ASD siblings) 
 Discovery 
 GEN973C002 
 frameshift_variant 
 rs41557518 
 c.459delC 
 p.Leu154Cysfs 
 111 Italian ASD children and 260 combined controls 
 Discovery 
 GEN973C003 
 allele 
  
  
  
 100 children with a diagnosis of ASD (born in Sardinia and of Sardinian descent), 91 of their mothers, and 40 of their healthy siblings, in addition to a control group of Caucasoid couples of multiparous women and their partners from Brazil and Denmark. 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
6
Duplication
 2
 
6
Deletion
 1
 
6
Deletion
 1
 

No Animal Model Data Available

 

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