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Relevance to Autism

De novo coding-synonymous variants in the H4C5 gene were identified in ASD probands from the Simons Simplex Collection, the Autism Sequencing Consortium, and the MSSNG cohort (Iossifov et al., 2014; Yuen et al., 2016; Satterstrom et al., 2020), while an inherited frameshift variant in this gene was observed in two ASD-affected siblings from a multiplex family in the iHART cohort (Ruzzo et al., 2019). Tessadori et al., 2022 reported individuals with de novo missense variants in the H4C5 gene presenting with a neurodevelopmental syndrome characterized by intellectual disability and developmental delay; two of these individuals also presented with autism spectrum disorder. Additional functional assessment of H4C5 missense variants in zebrafish embryos in this report demonstrated developmental defects in embryos expressing mutant H4C5 compared to wild-type protein for many of the missense variants tested, including those observed in the two individuals with autism spectrum disorder.

Molecular Function

Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a replication-dependent histone that is a member of the histone H4 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. This gene is found in the large histone gene cluster on chromosome 6.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Support
ASD, DD, ID
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
Genome-wide characteristics of de novo mutations in autism
ASD
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Recent Recommendation
Recurrent de novo missense variants across multiple histone H4 genes underlie a neurodevelopmental syndrome
DD, ID
ASD, epilepsy/seizures

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1305R001 
 frameshift_variant 
 c.245_282del 
 p.Val82GlyfsTer? 
 Familial 
 Maternal 
 Multiplex 
 GEN1305R002 
 synonymous_variant 
 c.63G>A 
 p.Lys21%3D 
 De novo 
  
 Simplex 
 GEN1305R003 
 synonymous_variant 
 c.102C>T 
 p.Ala34%3D 
 De novo 
  
 Simplex 
 GEN1305R004 
 synonymous_variant 
 c.67C>T 
 p.Leu23%3D 
 De novo 
  
  
 GEN1305R005 
 missense_variant 
 c.95A>C 
 p.Lys32Thr 
 De novo 
  
  
 GEN1305R006 
 missense_variant 
 c.98C>G 
 p.Pro33Arg 
 De novo 
  
  
 GEN1305R007 
 missense_variant 
 c.106C>T 
 p.Arg36Trp 
 De novo 
  
  
 GEN1305R008 
 missense_variant 
 c.113T>C 
 p.Leu38Pro 
 De novo 
  
  
 GEN1305R009 
 missense_variant 
 c.121C>T 
 p.Arg41Cys 
 De novo 
  
  
 GEN1305R010 
 missense_variant 
 c.121C>T 
 p.Arg41Cys 
 De novo 
  
  
 GEN1305R011 
 missense_variant 
 c.121C>T 
 p.Arg41Cys 
 De novo 
  
  
 GEN1305R012 
 missense_variant 
 c.121C>T 
 p.Arg41Cys 
 De novo 
  
  
 GEN1305R013 
 missense_variant 
 c.136C>T 
 p.Arg46Cys 
 De novo 
  
  
 GEN1305R014 
 missense_variant 
 c.136C>T 
 p.Arg46Cys 
 De novo 
  
  
 GEN1305R015 
 missense_variant 
 c.136C>T 
 p.Arg46Cys 
 De novo 
  
  
 GEN1305R016 
 missense_variant 
 c.136C>T 
 p.Arg46Cys 
 De novo 
  
  
 GEN1305R017 
 missense_variant 
 c.136C>T 
 p.Arg46Cys 
 De novo 
  
  
 GEN1305R018 
 missense_variant 
 c.136C>T 
 p.Arg46Cys 
 De novo 
  
  
 GEN1305R019 
 missense_variant 
 c.136C>T 
 p.Arg46Cys 
 De novo 
  
  
 GEN1305R020 
 missense_variant 
 c.295T>C 
 p.Tyr99His 
 De novo 
  
  
 GEN1305R021 
 missense_variant 
 c.295T>C 
 p.Tyr99His 
 De novo 
  
  
 GEN1305R022 
 missense_variant 
 c.295T>C 
 p.Tyr99His 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model

No Animal Model Data Available

No PIN Data Available
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