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Relevance to Autism

Heterozygous mutations in the H1-4 gene are responsible for Rahman syndrome (OMIM 617537), a disorder characterized by mild to severe intellectual disability associated with variable somatic overgrowth manifest as increased birth length, height, weight, and/or head circumference (Tatton-Brown et al., 2017). Autism spectrum disorder has been observed in a subset of individuals with H1-4 variants (Duffney et al., 2018; Burkardt et al., 2019; Tremblay et al., 2021).

Molecular Function

Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a replication-dependent histone that is a member of the histone H1 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. This gene is found in the large histone gene cluster on chromosome 6.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Epigenetics and autism spectrum disorder: A report of an autism case with mutation in H1 linker histone HIST1H1E and literature review
ASD, DD, ID
Support
Mutations in Epigenetic Regulation Genes Are a Major Cause of Overgrowth with Intellectual Disability.
Rahman syndrome, ID
Support
Rare coding variants in ten genes confer substantial risk for schizophrenia
Schizophrenia
Support
Expanding the mutational spectrum of Rahman syndrome: A rare disorder with severe intellectual disability and particular facial features in two Chinese patients
Rahman syndrome, DD, ID
Support
Exome sequencing identified a novel HIST1H1E heterozygous protein-truncating variant in a 6-month-old male patient with Rahman syndrome: A case report
Rahman syndrome, DD
Support
Large-scale targeted sequencing identifies risk genes for neurodevelopmental disorders
ASD, DD
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
HIST1H1E heterozygous protein-truncating variants cause a recognizable syndrome with intellectual disability and distinctive facial gestalt: A study to clarify the HIST1H1E syndrome phenotype in 30 in
ID
ASD or autistic features, stereotypy, epilepsy/sei
Support
Rahman syndrome, ASD, DD, ID
Recent Recommendation
Mutations of the histone linker H1-4 in neurodevelopmental disorders and functional characterization of neurons expressing C-terminus frameshift mutant H1.4
DD, ID
ASD or autistic features

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1292R001 
 frameshift_variant 
 c.435dupC 
 p.Thr146HisfsTer50 
 De novo 
  
  
 GEN1292R002 
 frameshift_variant 
 c.430dupG 
  
 De novo 
  
  
 GEN1292R003 
 frameshift_variant 
 c.441dupC 
  
 De novo 
  
  
 GEN1292R004 
 frameshift_variant 
 c.436_458del23 
  
 De novo 
  
  
 GEN1292R005 
 frameshift_variant 
 c.430dupG 
  
 De novo 
  
  
 GEN1292R006 
 frameshift_variant 
 c.441dupC 
  
 Unknown 
  
  
 GEN1292R007 
 frameshift_variant 
 c.365dup 
 p.Ala123GlyfsTer73 
 De novo 
  
  
 GEN1292R008 
 frameshift_variant 
 c.406_407insT 
 p.Lys136IlefsTer60 
 De novo 
  
  
 GEN1292R009 
 frameshift_variant 
 c.407dup 
 p.Lys137GlufsTer59 
 De novo 
  
  
 GEN1292R010 
 frameshift_variant 
 c.416dup 
 p.Lys140GlufsTer56 
 De novo 
  
  
 GEN1292R011 
 frameshift_variant 
 c.425_431del7ins8 
 p.Thr142LysfsTer54 
 De novo 
  
  
 GEN1292R012 
 frameshift_variant 
 c.430dupG 
 p.Ala144GlyfsTer52 
 De novo 
  
  
 GEN1292R013 
 frameshift_variant 
 c.430dupG 
 p.Ala144GlyfsTer52 
 De novo 
  
  
 GEN1292R014 
 frameshift_variant 
 c.430dupG 
 p.Ala144GlyfsTer52 
 De novo 
  
  
 GEN1292R015 
 frameshift_variant 
 c.430dupG 
 p.Ala144GlyfsTer52 
 De novo 
  
  
 GEN1292R016 
 frameshift_variant 
 c.430dupG 
 p.Ala144GlyfsTer52 
 Unknown 
  
  
 GEN1292R017 
 frameshift_variant 
 c.430dupG 
 p.Ala144GlyfsTer52 
 De novo 
  
  
 GEN1292R018 
 frameshift_variant 
 c.430dupG 
 p.Ala144GlyfsTer52 
 Unknown 
  
  
 GEN1292R019 
 frameshift_variant 
 c.430dupG 
 p.Ala144GlyfsTer52 
 De novo 
  
  
 GEN1292R020 
 frameshift_variant 
 c.430dupG 
 p.Ala144GlyfsTer52 
 Unknown 
  
  
 GEN1292R021 
 frameshift_variant 
 c.430dupG 
 p.Ala144GlyfsTer52 
 Unknown 
  
  
 GEN1292R022 
 frameshift_variant 
 c.431dupC 
 p.Ala145GlyfsTer51 
 De novo 
  
  
 GEN1292R023 
 frameshift_variant 
 c.433dup 
 p.Ala145GlyfsTer51 
 De novo 
  
  
 GEN1292R024 
 frameshift_variant 
 c.435dupC 
 p.Thr146HisfsTer50 
 Unknown 
  
  
 GEN1292R025 
 frameshift_variant 
 c.435dup 
 p.Thr146HisfsTer50 
 De novo 
  
  
 GEN1292R026 
 frameshift_variant 
 c.436_458del 
 p.Thr146AspfsTer42 
 De novo 
  
  
 GEN1292R027 
 frameshift_variant 
 c.440_441del 
 p.Pro147GlnfsTer48 
 De novo 
  
  
 GEN1292R028 
 frameshift_variant 
 c.441dupC 
 p.Lys148GlnfsTer48 
 Unknown 
  
  
 GEN1292R029 
 frameshift_variant 
 c.441dup 
 p.Lys148GlnfsTer48 
 De novo 
  
  
 GEN1292R030 
 frameshift_variant 
 c.444_466del 
 p.Lys149GlufsTer39 
 De novo 
  
  
 GEN1292R031 
 frameshift_variant 
 c.454_455insT 
 p.Lys152IlefsTer44 
 De novo 
  
  
 GEN1292R032 
 frameshift_variant 
 c.430dupG 
 p.Ala144GlyfsTer52 
  
  
  
 GEN1292R033 
 frameshift_variant 
 c.430dupG 
 p.Ala144GlyfsTer52 
  
  
  
 GEN1292R034 
 frameshift_variant 
 c.430dupG 
 p.Ala144GlyfsTer52 
  
  
  
 GEN1292R035 
 frameshift_variant 
 c.392dup 
 p.Ala132SerfsTer64 
  
  
  
 GEN1292R036 
 frameshift_variant 
 c.431dup 
 p.Ala145GlyfsTer51 
  
  
  
 GEN1292R037 
 frameshift_variant 
 c.430dup 
 p.Ala144GlyfsTer52 
  
  
  
 GEN1292R038 
 frameshift_variant 
 c.435dup 
 p.Thr146HisfsTer50 
  
  
  
 GEN1292R039 
 initiator_codon_variant 
 c.1A>G 
 p.Met1? 
 De novo 
  
  
 GEN1292R040 
 frameshift_variant 
 c.100_101insT 
 p.Lys34IlefsTer13 
 Familial 
 Maternal 
  
 GEN1292R041 
 frameshift_variant 
 c.265del 
 p.Ser89AlafsTer140 
 De novo 
  
  
 GEN1292R042 
 missense_variant 
 c.447G>C 
 p.Lys149Asn 
 De novo 
  
  
 GEN1292R043 
 frameshift_variant 
 c.233del 
 p.Ser78ThrfsTer11 
 Familial 
 Paternal 
  
 GEN1292R044 
 frameshift_variant 
 c.441dup 
 p.Lys148GlnfsTer48 
 De novo 
  
  
 GEN1292R045 
 frameshift_variant 
 c.441dup 
 p.Lys148GlnfsTer48 
 Unknown 
  
  
 GEN1292R046 
 frameshift_variant 
 c.505_506insT 
 p.Lys169IlefsTer27 
 De novo 
  
 Simplex 
 GEN1292R047 
 frameshift_variant 
 c.368dup 
 p.Gly124ArgfsTer72 
 Familial 
 Maternal 
  
 GEN1292R048 
 frameshift_variant 
 c.416_419dup 
 p.Ala141GlufsTer56 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model

No Animal Model Data Available

No PIN Data Available
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