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Relevance to Autism

Identification of rare variants shared by two or more siblings with ASD following integration of whole genome sequencing data of 866 multiplex families from the iHART and MSSNG cohorts in Lee et al., 2025 identified shared rare variants in the FRRS1L gene in two families; CRISPR/Cas9 experiments demonstrated downregulation of FRRS1L expression by the chr9:111924882C>T family variant. Furthermore, behavioral tests of Frrs1l heterozygous knockout mice (Frrs1l+/-) in Lee et al., 2025 showed specific impairment of social novetly recognition without altering other behavioral phenotypes. A maternally-inherited loss-of-function variant in FRRS1L had previously been identified in one of two ASD-affected siblings from a multiplex family from the AGRE cohort in Cirnigliaro et al., 2023.

Molecular Function

This gene encodes a component of the outer-core of an alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) receptor protein in the brain. The encoded protein is thought to interact with inner-core components of the receptor, and play a role in the modulation of glutamate signaling. Homozygous variants in this gene are responsible for an autosomal recessive form of early infantile epileptic encephalopathy (DEE37; OMIM 616981).

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References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Shared rare genetic variants in multiplex autism families suggest a social memory gene under selection
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1486R001 
 intron_variant 
 c.238+4299G>A 
 p.? 
 Familial 
  
 Multiplex 
 GEN1486R002 
 intron_variant 
 c.238+4299G>A 
 p.? 
 Familial 
  
 Multiplex 
 GEN1486R003 
 stop_gained 
 c.583G>T 
 p.Gly195Ter 
 Familial 
 Maternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
9
Duplication
 1
 
9
Duplication
 1
 
9
Deletion
 2
 
9
N/A
 2
 
9
Deletion
 1
 
9
Deletion-Duplication
 7
 

Model Summary

The heterozygous Frrs1l mouse model shows a deficit in discrimination for social novelty. This heterozygote model show no phenotype in sociability, novel object discrimination, contextual fear memory. The model also shows typical locomotor activity in a novel environment.

References

Type
Title
Author, Year
Primary
Shared rare genetic variants in multiplex autism families suggest a social memory gene under selection

M_FRRS1L_1_KO_HT

Model Type: Genetic
Model Genotype: Heterozygous
Mutation: Exon 3 of Frrs1l was deleted by insertion of the LacZ reporter gene, resulting in a frameshift (MRC stock EM:07313).
Allele Type: Knockout
Strain of Origin: Not specified
Genetic Background: C57BL/6N
ES Cell Line: Not specified
Mutant ES Cell Line:
Model Source: Medical Research Council Harwell

M_FRRS1L_1_KO_HT

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Social memory1
Decreased
Description: Frrs1l heterozygous knockout mice show no preference for novel conspecific, measured by interaction time and number of interactions, resulting in a lower discrimination index compared to wildtype mice.
 Three-chamber social approach test
 2-3 months
Anxiety1
 No change
 Open field test
 2-3 months
Exploratory activity1
 No change
 Novel object recognition test
 2-3 months
Cued or contextual fear conditioning: memory of context1
 No change
 Fear conditioning test
 2-3 months
Object recognition memory1
 No change
 Novel object recognition test
 2-3 months
General locomotor activity: ambulatory activity1
 No change
 Open field test
 2-3 months
Social approach1
 No change
 Three-chamber social approach test
 2-3 months
 Not Reported:

No PIN Data Available
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