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Relevance to Autism

Rare mutations in the FRMPD4 gene have been identified with autism and schizophrenia (Piton et al., 2011). X-exome sequencing of 405 unresolved families with X-linked intellectual disability (XLID) in Hu et al., 2016 identified a maternally-transmitted frameshift variant in the FRMPD4 gene that segregated with XLID in a family in which affected males presented with variable seizures, poor or absent speech, and behavioral problems; a de novo missense variant in FRMPD4 was also identified in an unrelated male proband presenting with ASD, developmental delay, and absent speech in this study. Piard et al., 2017 presented two novel families with four affected males carrying FRMPD4 mutations; three of these affected males presented with ASD in addition to intellectual disability, gross motor delay, and speech delay. Frmpd4-knockout mice were also shown to display hippocampal-dependent spatial learning and memory deficits in Piard et al., 2017.

Molecular Function

This gene encodes a multi-domain (WW, PDZ, FERM) containing protein. Through its interaction with other proteins (such as PSD-95), it functions as a positive regulator of dendritic spine morphogenesis and density, and is required for the maintenance of excitatory synaptic transmission.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Systematic resequencing of X-chromosome synaptic genes in autism spectrum disorder and schizophrenia.
ASD
SCZ
Support
Integrating de novo and inherited variants in 42
ASD
Support
New insights into neurodevelopmental disorders by whole genome sequencing of 100 families from Italy
ASD, SLD
Support
Complex Diagnostics of Non-Specific Intellectual Developmental Disorder
DD, ID
Autistic features
Support
Prospective study to analyze the yield and clinical impact of trio exome sequencing in 137 Indian children with autism spectrum disorder
ASD
DD
Support
Neurological Diseases With Autism Spectrum Disorder: Role of ASD Risk Genes.
ASD
ID
Support
Unveiling Hidden Genetic Architectures: Molecular Diagnostic Yield of Whole Exome Sequencing in 50 Children With Autism Spectrum Disorder Negative for Copy Number Variations
ASD
DD
Support
X-exome sequencing of 405 unresolved families identifies seven novel intellectual disability genes
ID
ASD
Support
The genetic landscape of autism spectrum disorder in an ancestrally diverse cohort
ASD
Support
Range of genetic mutations associated with severe non-syndromic sporadic intellectual disability: an exome sequencing study.
ID
Epilepsy, ASD
Support
Next-generation phenotyping integrated in a national framework for patients with ultrarare disorders improves genetic diagnostics and yields new molecular findings
ASD
DD
Support
Reanalysis of Trio Whole-Genome Sequencing Data Doubles the Yield in Autism Spectrum Disorder: De Novo Variants Present in Half
ASD
ID, epilepsy/seizures
Recent Recommendation
FRMPD4 mutations cause X-linked intellectual disability and disrupt dendritic spine morphogenesis.
ID
ASD, epilepsy/seizures
Recent Recommendation
Preso, a novel PSD-95-interacting FERM and PDZ domain protein that regulates dendritic spine morphogenesis.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN098R001 
 missense_variant 
 c.3440G>A 
 p.Gly1147Glu 
 Familial 
 Maternal 
  
 GEN098R002 
 missense_variant 
 c.2854G>A 
 p.Glu952Lys 
 Familial 
 Maternal 
 Simplex 
 GEN098R003 
 frameshift_variant 
 c.1851del 
 p.Cys618ValfsTer8 
 Familial 
 Maternal 
 Extended multiplex 
 GEN098R004 
 missense_variant 
 c.1657T>C 
 p.Cys553Arg 
 De novo 
  
  
 GEN098R005 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Multiplex 
 GEN098R006 
 stop_gained 
 c.856C>T 
 p.Leu286= 
 Familial 
 Maternal 
 Multiplex 
 GEN098R007 
 missense_variant 
 c.3271C>G 
 p.Gln1091Glu 
 Familial 
 Maternal 
  
 GEN098R008 
 stop_gained 
 c.1411G>T 
 p.Glu471Ter 
 De novo 
  
 Simplex 
 GEN098R009 
 missense_variant 
 c.608C>T 
 p.Ala203Val 
 De novo 
  
 Simplex 
 GEN098R010 
 missense_variant 
 c.1924G>A 
 p.Ala642Thr 
 Familial 
 Maternal 
 Simplex 
 GEN098R011 
 missense_variant 
 c.2425G>A 
 p.Ala809Thr 
 Unknown 
  
  
 GEN098R012 
 missense_variant 
 c.1535A>G 
 p.Tyr512Cys 
 Unknown 
  
  
 GEN098R013 
 missense_variant 
 c.1405A>G 
 p.Arg469Gly 
 Unknown 
  
  
 GEN098R014 
 missense_variant 
 c.213C>G 
 p.Ile71Met 
 Unknown 
  
  
 GEN098R015 
 missense_variant 
 c.1882C>T 
 p.Arg628Trp 
 Familial 
 Maternal 
 Simplex 
 GEN098R016 
 missense_variant 
 c.1636C>T 
 p.Leu546Phe 
 Unknown 
  
  
 GEN098R017 
 missense_variant 
 c.713C>A 
 p.Ser238Tyr 
 Familial 
 Maternal 
 Simplex 
 GEN098R018 
 missense_variant 
 c.3598T>C 
 p.Ser1200Pro 
 Familial 
 Maternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
X
Deletion-Duplication
 21
 
X
Deletion-Duplication
 2
 
X
Deletion
 3
 
X
Deletion
 4
 
X
Deletion-Duplication
 1
 
X
Deletion
 1
 
X
Duplication
 1
 
X
Duplication
 2
 
X
Deletion
 4
 
X
Deletion
 1
 
X
Duplication
 6
 
X
Deletion
 1
 
X
Deletion-Duplication
 22
 

No Animal Model Data Available

No PIN Data Available
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