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Relevance to Autism

Genetic association has been found between the FRK gene and autism in two large cohorts (AGRE and ACC) of European ancestry and replicated in two other cohorts (CAP and CART) (Wang et al., 2009).

Molecular Function

The protein encoded by this gene belongs to the TYR family of protein kinases. This tyrosine kinase is a nuclear protein and may function during G1 and S phase of the cell cycle and suppress growth.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Common genetic variants on 5p14.1 associate with autism spectrum disorders.
ASD
Positive Association
A genome-wide association study of autism incorporating autism diagnostic interview-revised, autism diagnostic observation schedule, and social res...
ASD
Support
Exome sequencing of extended families with autism reveals genes shared across neurodevelopmental and neuropsychiatric disorders.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN097R001 
 missense_variant 
 c.398C>T 
 p.Ser133Leu 
 Familial 
  
 Extended multiplex (at least one pair of ASD affec 

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN097C001 
 intergenic_variant 
 rs9384952 
  
 C/T 
 US and European 
 Discovery 
 GEN097C002 
 intergenic_variant 
 rs9384952 
  
  
 Discovery cohort: 2165 participants from AGRE 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
6
Deletion
 1
 
6
Deletion
 2
 
6
Deletion
 1
 
6
Deletion
 1
 
6
Deletion-Duplication
 6
 
6
Deletion
 1
 
6
N/A
 1
 
6
Deletion
 1
 

No Animal Model Data Available


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2 663 J3KN59 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
CSK c-src tyrosine kinase 1445 A8K3B6 LC-MS/MS
Varjosalo M , et al. 2013
CSK c-src tyrosine kinase 1445 A8K3B6 IP; LC-MS/MS
Huttlin EL , et al. 2015
FYN FYN oncogene related to SRC, FGR, YES 2534 P06241 2-D gel electrophoresis; in vitro kinase assay
Marie-Cardine A , et al. 1999
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 3320 P07900 LUMIER with BACON
Taipale M , et al. 2012
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 10657 Q07666 FRET; GST; Phage display
Asbach B , et al. 2012
PCBP1 poly(rC) binding protein 1 5093 Q15365 IP; LC-MS/MS
Huttlin EL , et al. 2015
PTEN phosphatase and tensin homolog 5728 F6KD01 MS; IP/WB
Yim EK , et al. 2009
RB1 retinoblastoma 1 5925 P06400 IP/WB
Craven RJ , et al. 1995
SF3B4 splicing factor 3b, subunit 4, 49kDa 10262 B3KUJ0 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014

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