Summary Statistics:
ASD Reports: 56
Recent Reports: 15
Annotated variants: 95
Associated CNVs: 7
Evidence score: 3
Gene Score: 3
Relevance to Autism
Studies have found genetic association and rare variants in the FOXP2 gene that are identified with autism. Positive associations have been found in the Chinese Han population and mutations were identified in the Japanese population. However, several other studies have either found no genetic association or no rare genetic variation in the FOXP2 gene identified with autism. Separately, rare variations in the FMR1 gene have been identified with verbal dyspraxia.
Molecular Function
This gene encodes a member of the forkhead/winged-helix (FOX) family of transcription factors. It is expressed in fetal and adult brain as well as in several other organs such as the lung and gut. The protein product contains a FOX DNA-binding domain and a large polyglutamine tract and is an evolutionarily conserved transcription factor, which may bind directly to approximately 300 to 400 gene promoters in the human genome to regulate the expression of a variety of genes. This gene is required for proper development of speech and language regions of the brain during embryogenesis, and may be involved in a variety of biological pathways and cascades that may ultimately influence language development. Mutations in this gene cause speech-language disorder 1 (SPCH1), also known as autosomal dominant speech and language disorder with orofacial dyspraxia.
References
Primary
Association between the FOXP2 gene and autistic disorder in Chinese population.
ASD
Positive Association
Uncovering the genetic architecture of broad antisocial behavior through a genome-wide association study meta-analysis
Antisocial behavior
Positive Association
A common genetic variant in FOXP2 is associated with language-based learning (dis)abilities: Evidence from two Italian independent samples.
Lanaguge and reading abilities
Positive Association
The central nervous system patterning gene variants associated with clinical symptom severity of autism spectrum disorders.
ASD
Severity of social reciprocity deficits (ADI-R, SC
Positive Association
Absence of causative mutations and presence of autism-related allele in FOXP2 in Japanese autistic patients.
ASD
Negative Association
Analysis of two language-related genes in autism: a case-control association study of FOXP2 and CNTNAP2.
ASD
Negative Association
Association study of the CNS patterning genes and autism in Han Chinese in Taiwan.
ASD
Negative Association
No association of FOXP2 and PTPRZ1 on 7q31 with autism from the Japanese population.
ASD
Negative Association
Mutation screening of FOXP2 in individuals diagnosed with autistic disorder.
ASD
Negative Association
Evaluation of FOXP2 as an autism susceptibility gene.
ASD
Negative Association
FOXP2 is not a major susceptibility gene for autism or specific language impairment.
ASD
Support
Epileptic encephalopathies of the Landau-Kleffner and continuous spike and waves during slow-wave sleep types: genomic dissection makes the link wi...
Epilepsy
ADHD
Support
Functional characterization of rare FOXP2 variants in neurodevelopmental disorder.
Support
Sex-Specific Social Behavior and Amygdala Proteomic Deficits in Foxp2 +/- Mutant Mice
ASD
Support
Oligogenic heterozygosity in individuals with high-functioning autism spectrum disorders.
ASD
Support
FOXP2 down expression is associated with executive dysfunctions and electrophysiological abnormalities of brain in Autism spectrum disorder; a neuroimaging genetic study
ASD
Support
The genomic landscape of balanced cytogenetic abnormalities associated with human congenital anomalies.
Speech delay
Support
Large-scale targeted sequencing identifies risk genes for neurodevelopmental disorders
ASD, DD
Support
Molecular networks implicated in speech-related disorders: FOXP2 regulates the SRPX2/uPAR complex.
Epilepsy/seizures, polymicrogyria
Support
Impaired Neurodevelopmental Genes in Slovenian Autistic Children Elucidate the Comorbidity of Autism With Other Developmental Disorders
ASD
ID
Support
FOXP2 variants in 14 individuals with developmental speech and language disorders broaden the mutational and clinical spectrum.
Delayed speech and language development
ASD or autistic features
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
Language features in a mother and daughter of a chromosome 7;13 translocation involving FOXP2.
DVD
Support
Clinical Targeted Panel Sequencing Analysis in Clinical Evaluation of Children with Autism Spectrum Disorder in China
ASD
Support
Comprehensive molecular testing in patients with high functioning autism spectrum disorder.
ASD
Support
Impact of on-site clinical genetics consultations on diagnostic rate in children and young adults with autism spectrum disorder.
ASD
Support
Absence of a paternally inherited FOXP2 gene in developmental verbal dyspraxia.
DVD
Support
Increased locomotor activity via regulation of GABAergic signalling in foxp2 mutant zebrafish-implications for neurodevelopmental disorders
Support
Large-scale discovery of novel genetic causes of developmental disorders.
Unknown diagnosis
Support
DD, epilepsy/seizures
Support
Genome sequencing identifies multiple deleterious variants in autism patients with more severe phenotypes.
ASD
Support
Speech, prosody, and voice characteristics of a mother and daughter with a 7;13 translocation affecting FOXP2.
Support
Prevalence and phenotypic impact of rare potentially damaging variants in autism spectrum disorder
ASD
Support
Small intragenic deletion in FOXP2 associated with childhood apraxia of speech and dysarthria.
CAS
Support
Rates, distribution and implications of postzygotic mosaic mutations in autism spectrum disorder.
ASD
Support
A forkhead-domain gene is mutated in a severe speech and language disorder.
Speech and language disorder
Support
A single center experience with publicly funded clinical exome sequencing for neurodevelopmental disorders or multiple congenital anomalies
DD, ID
Highly Cited
Molecular evolution of FOXP2, a gene involved in speech and language.
Recent Recommendation
Novel candidate genes and regions for childhood apraxia of speech identified by array comparative genomic hybridization.
CAS
Recent Recommendation
Chromatin Decondensation by FOXP2 Promotes Human Neuron Maturation and Expression of Neurodevelopmental Disease Genes.
Recent Recommendation
Incomplete and inaccurate vocal imitation after knockdown of FoxP2 in songbird basal ganglia nucleus Area X.
Recent Recommendation
Human-specific transcriptional regulation of CNS development genes by FOXP2.
Recent Recommendation
Discovery of the first genome-wide significant risk loci for attention deficit/hyperactivity disorder.
ADHD
Recent Recommendation
Identification of FOXP2 truncation as a novel cause of developmental speech and language deficits.
Verbal dyspraxia
Recent Recommendation
A humanized version of Foxp2 affects cortico-basal ganglia circuits in mice.
Recent Recommendation
Proteomic analysis of FOXP proteins reveals interactions between cortical transcription factors associated with neurodevelopmental disorders.
Recent Recommendation
A functional genetic link between distinct developmental language disorders.
Recent Recommendation
Foxp2 controls synaptic wiring of corticostriatal circuits and vocal communication by opposing Mef2c.
Recent Recommendation
Conservation and diversity of Foxp2 expression in muroid rodents: functional implications.
Recent Recommendation
Sumoylation of FOXP2 Regulates Motor Function and Vocal Communication Through Purkinje Cell Development.
Recent Recommendation
Expression of FOXP2 in the developing monkey forebrain: comparison with the expression of the genes FOXP1, PBX3, and MEIS2.
Recent Recommendation
FOXP2 targets show evidence of positive selection in European populations.
Recent Recommendation
Impaired synaptic plasticity and motor learning in mice with a point mutation implicated in human speech deficits.
GEN096R001
synonymous_variant
c.495A>G
p.Gln165=
GEN096R002
inframe_deletion
delCAA
GEN096R003
synonymous_variant
C>T
p.(=)
GEN096R004
synonymous_variant
A>G
p.(=)
GEN096R005
synonymous_variant
G>T
p.(=)
GEN096R006
synonymous_variant
A>T
p.(=)
GEN096R007
synonymous_variant
T>A
p.(=)
GEN096R008
synonymous_variant
A>G
p.(=)
GEN096R009
synonymous_variant
T>C
p.(=)
GEN096R010
synonymous_variant
G>A
p.(=)
GEN096R011
synonymous_variant
T>G
p.(=)
GEN096R012
inframe_insertion
insCAGCAG
Familial
Maternal
GEN096R013
synonymous_variant
T>C
p.(=)
GEN096R014
synonymous_variant
A>G
p.(=)
GEN096R015
synonymous_variant
C>G
p.(=)
GEN096R016
synonymous_variant
T>C
p.(=)
GEN096R017
synonymous_variant
T>G
p.(=)
GEN096R018
synonymous_variant
T>C
p.(=)
GEN096R019
inframe_deletion
del18
Familial
Maternal
GEN096R020
inframe_deletion
del15
Familial
Maternal
Multiplex
GEN096R021
synonymous_variant
c.741C>T
p.Leu247=
GEN096R022
synonymous_variant
T>G
p.(=)
GEN096R023
synonymous_variant
c.570A>G
p.Gln190=
GEN096R024
synonymous_variant
T>G
p.(=)
GEN096R025
synonymous_variant
C>G
p.(=)
GEN096R026
synonymous_variant
A>G
p.(=)
GEN096R027
5_prime_UTR_variant
G>A
GEN096R028
5_prime_UTR_variant
G>A
GEN096R029
synonymous_variant
C>T
p.(=)
GEN096R030
synonymous_variant
T>A
p.(=)
GEN096R031
synonymous_variant
T>C
p.(=)
GEN096R032
synonymous_variant
T>G
p.(=)
GEN096R033
synonymous_variant
T>C
p.(=)
GEN096R034
synonymous_variant
C>G
p.(=)
GEN096R035
missense_variant
c.50A>T
p.Gln17Leu
Unknown
Multiplex
GEN096R036
stop_gained
c.979C>T
p.Arg327Ter
Familial
Maternal
Multiplex
GEN096R037
inframe_insertion
insCAGCAGCAACAA
Multiplex
GEN096R038
missense_variant
c.1321C>A
p.Pro441Thr
Unknown
Simplex
GEN096R039
missense_variant
c.2012A>G
p.Asn671Ser
Unknown
Simplex
GEN096R040
missense_variant
c.2159A>C
p.His720Pro
Familial (1 case); De novo (1 case)
Maternal (1 case)
Simplex
GEN096R041
missense_variant
c.2175A>T
p.Glu725Asp
Unknown
Simplex
GEN096R042
inframe_insertion
c.615_617dup
p.Gln208dup
De novo (1 case); unknown (3 cases)
Simplex
GEN096R043
missense_variant
c.1655G>A
p.Arg552His
Familial
Maternal and Paternal
Multi-generational
GEN096R044
translocation
Unknown
GEN096R045
translocation
Unknown
GEN096R046
translocation
Familial
Maternal
Simplex
GEN096R047
intron_variant
c.1468+9T>C
Unknown
Unknown
GEN096R048
missense_variant
c.1217T>C
p.Met406Thr
Unknown
Unknown
GEN096R049
synonymous_variant
c.1368T>C
p.Ile456=
Unknown
Unknown
GEN096R050
synonymous_variant
c.1761G>A
p.(=)
Unknown
Unknown
GEN096R051
intron_variant
c.1770-33G>A
Unknown
Unknown
GEN096R052
inframe_deletion
c.522_524del
p.Gln174_Leu175delinsHis
Unknown
Unknown
GEN096R053
missense_variant
c.1786A>C
p.Asn596His
Unknown
Multiplex
GEN096R054
frameshift_variant
c.324dup
p.Gln109SerfsTer156
Familial
Paternal
Simplex
GEN096R055
frameshift_variant
c.1165_1166del
p.Gln389ValfsTer7
De novo
Simplex
GEN096R056
missense_variant
c.1321C>A
p.Pro441Thr
Familial
Maternal
Multiplex
GEN096R057
intron_variant
c.-11+3115T>C
De novo
Unknown
GEN096R058
intron_variant
c.1092-3370C>T
De novo
Unknown
GEN096R059
intron_variant
c.1264-1709A>G
De novo
Unknown
GEN096R060
missense_variant
c.426G>T
p.Gln142His
Familial
Paternal
Simplex
GEN096R061
copy_number_loss
De novo
Multiplex (monozygotic twins)
GEN096R062
stop_gained
c.1057C>T
p.Arg353Ter
Familial
Maternal
Multiplex
GEN096R063
missense_variant
c.1682G>C
p.Arg561Pro
Familial
Paternal
Multiplex
GEN096R064
stop_gained
c.934C>T
p.His312Tyr
De novo
Simplex
GEN096R065
stop_gained
c.1765C>T
p.Arg589Ter
De novo
Simplex
GEN096R066
frameshift_variant
c.1611del
p.Phe537LeufsTer28
De novo
Multiplex
GEN096R067
stop_gained
c.917C>T
p.Ala306Val
Familial
Paternal
Multiplex
GEN096R068
missense_variant
c.1637C>T
p.Thr546Ile
Familial
Paternal
Simplex
GEN096R069
complex_structural_alteration
De novo
Simplex
GEN096R070
missense_variant
c.1217T>C
p.Met406Thr
Familial
Paternal
Simplex
GEN096R071
stop_gained
c.1429C>T
p.Arg477Ter
De novo
Simplex
GEN096R072
copy_number_loss
Familial
Paternal
Multiplex
GEN096R073
copy_number_loss
Unknown
GEN096R074
missense_variant
c.1654C>T
p.Arg552Cys
De novo
Simplex
GEN096R075
missense_variant
c.1664T>C
p.Ile555Thr
De novo
GEN096R076
frameshift_variant
c.1842_1843del
p.Gly615LysfsTer19
Unknown
GEN096R077
splice_site_variant
c.987-1G>A
Unknown
GEN096R078
stop_gained
c.1690C>T
p.Arg564Ter
Familial
GEN096R079
stop_gained
c.1201C>T
p.Arg401Ter
Unknown
GEN096R080
missense_variant
c.233G>C
p.Ser78Thr
Unknown
GEN096R081
missense_variant
c.1831T>A
p.Leu611Met
Unknown
GEN096R082
stop_gained
c.1674G>A
p.Leu558%3D
Unknown
GEN096R083
frameshift_variant
c.1088del
p.Leu363Ter
Familial
Maternal
GEN096R084
missense_variant
c.1067G>A
p.Cys356Tyr
Familial
Paternal
GEN096R085
missense_variant
c.1549G>A
p.Ala517Thr
Unknown
Not maternal
Simplex
GEN096R086
insertion
Unknown
Simplex
GEN096C001
intron_variant
G to T
N/A
Japanese
Discovery
GEN096C002
intron_variant
rs1456031
c.1264-2019T>C;c.1267-2019T>C;c.1342-2019T>C;c.1318-2019T>C;c.1411-2019T>C;c.433-2019T>C
Chinese Han
Discovery
GEN096C003
intron_variant
rs1852469
c.-11+5061A>T;c.-345+5061A>T;c.-11+5879A>T;c.-344-6081A>T;c.-10-6081A>T
391 ASD cases (88.3% male; age 9.5 4.4 years) of Han Chinese descent
Discovery
GEN096C004
intron_variant
rs2396753
c.169-26341C>A;c.168+81597C>A;c.*228+9183C>A
391 ASD cases (88.3% male; age 9.5 4.4 years) of Han Chinese descent
Discovery
GEN096C005
intron_variant
rs1456031
c.1264-2019T>C;c.1267-2019T>C;c.1342-2019T>C;c.1318-2019T>C;c.1411-2019T>C;c.433-2019T>C
391 ASD cases (88.3% male; age 9.5 4.4 years) of Han Chinese descent
Discovery
GEN096C006
intron_variant
rs6980093
c.169-11932G>A
Population-based cohort of 699 Italian subjects (age range, 3-11 years)
Discovery
GEN096C007
intron_variant
rs6980093
c.169-11932G>A
573 Italian children with DSM-IV diagnosis of developmental dyslexia (age range, 6-18 years)
Discovery
GEN096C008
intron_variant
rs5886709
c.168+19400_168+19401delTC
20,183 ADHD cases and 35,191 controls
Discovery
GEN096C009
intron_variant
rs12536335
c.-10-23398A>G
Meta-analysis data from 28 discovery samples (N = 85,359) and five independent replication samples (N = 8058) from the Broad Antisocial Behavior Consortium (BroadABC).
Discovery
7
Deletion-Duplication
28
7
Deletion-Duplication
45
Summary Statistics:
# of Reports: 5
# of Models: 8
Model Summary
Homozygous knockout mice display severe motor impairment, postnatal lethality, and reduced ultrasonic vocalizations.
References
Primary
Altered ultrasonic vocalization in mice with a disruption in the Foxp2 gene.
Additional
Generation of mice with a conditional Foxp2 null allele.
Additional
A humanized version of Foxp2 affects cortico-basal ganglia circuits in mice.
Additional
Foxp2 mutations impair auditory-motor association learning.
Additional
A Foxp2 Mutation Implicated in Human Speech Deficits Alters Sequencing of Ultrasonic Vocalizations in Adult Male Mice
Model Type:
Genetic
Model Genotype:
Homozygous
Mutation:
Targeted disruption of exon 12 and 13 of Foxp2 gene.
Allele Type: Targeted (Knock-Out)
Strain of Origin: C57BL/6
Genetic Background: C57BL/6
ES Cell Line: Not Specified
Mutant ES Cell Line: Not specified
Model Source: Not Specified
Model Type:
Genetic
Model Genotype:
Heterozygous
Mutation:
Targeted disruption of exon 12 and 13 of Foxp2 gene.
Allele Type: Targeted (Knock-Out)
Strain of Origin: C57BL/6
Genetic Background: C57BL/6
ES Cell Line: Not Specified
Mutant ES Cell Line: Not specified
Model Source: Not Specified
Model Type:
Genetic
Model Genotype:
Homozygous
Mutation:
Foxp2 KO (null) with deletion of exons 12-14 of the gene using Sox-cre expression in the maternal germline
Allele Type: Knockout
Strain of Origin: C57BL/6
Genetic Background: C57BL/6 albino
ES Cell Line: Bruce-4
Mutant ES Cell Line: Not specified
Model Source: Not Specified
Model Type:
Genetic
Model Genotype:
Heterozygous
Mutation:
Foxp2 heterozygous KO with deletion of exons 12-14 of the gene using Sox-cre expression in the maternal germline
Allele Type: Knockout
Strain of Origin: C57BL/6
Genetic Background: C57BL/6 albino
ES Cell Line: Bruce-4
Mutant ES Cell Line: Not specified
Model Source: Not Specified
Model Type:
Genetic
Model Genotype:
Homozygous
Mutation:
Homologous recombination mediated knock-in of T302N and N324S substitutions in exon 7 of Foxp2 gene.
Allele Type: Targeted (Knock-In)
Strain of Origin: C57BL/6
Genetic Background: Not Specified
ES Cell Line: Bruce-4
Mutant ES Cell Line: Not specified
Model Source: Not Specified
Model Type:
Genetic
Model Genotype:
Heterozygous
Mutation:
ENU mutagenesis genrated misense substitution of an arginine to histidine in the DNA-binding domain of Foxp2.
Allele Type: Mutagenesis (Substitution)
Strain of Origin: Not specified
Genetic Background: C3H/HeNHsd
ES Cell Line: Not specified
Mutant ES Cell Line: Not specified
Model Source: Not specified
Model Type:
Genetic
Model Genotype:
Heterozygous
Mutation:
ENU mutagenesis genrated misense substitution of an arginine to histidine in the DNA-binding domain of Foxp2.
Allele Type: Mutagenesis (Substitution)
Strain of Origin: Not specified
Genetic Background: C3H/HeNHsd
ES Cell Line: Not specified
Mutant ES Cell Line: Not specified
Model Source: Not specified
Model Type:
Genetic
Model Genotype:
Homozygous
Mutation:
Derived from large-scale ENU mutagenesis screen conducted on founder BALB/C genetic background. Heterozygous males were bred to C57BL/6 males to get offspring with C57BL/6 mixed background.
Allele Type: Mutagenesis (Substitution)
Strain of Origin: BALB/C
Genetic Background: C57BL/6* mixed
ES Cell Line:
Mutant ES Cell Line:
Model Source:
General locomotor activity1
Decreased
View More
Description: Decreased spontaneous locomotor activity
Exp Paradigm: Open field test
Open field test
Unreported
Abnormal
View More
Description: Delayed righting ability; delayed righting ability when dropped
Exp Paradigm: Measure of time taken by animal to correct itself after being placed on it's back
Righting reflex test
P6-p15
Abnormal
View More
Description: Negative geotaxis test; failure to orient up an incline plane when placed facing down plane
Exp Paradigm: Time taken for mouse to reorient itself in an upward facing position when placed facing downward a downward-facing slope
Negative geotaxis test
P6-p15
Decreased
View More
Description: Decreased thickness of molecular layer; abnormal granule cell layer with ectopically placed cells; abnormal radial glial development
Exp Paradigm: Immunostaining for calbindin (purkinje cell marker); gfap (radial glial marker)
Immunohistochemistry
P17
Decreased
View More
Description: Decreased ultrasonic vocalization; decreased number of vocalizations; normal duration, peak frequency, and bandwith; reduced incidence of clicks
Exp Paradigm: Automated vocalization monitoring of mother-infant interaction followed by spectrographic analysis
Monitoring ultrasonic vocalizations
P6-p15
Decreased
View More
Description: Decreased size/growth
Exp Paradigm: General observations
General observations
P3
Increased
View More
Description: Increased lethality; died by postnatal day 21
Exp Paradigm: General observations
General observations
3 weeks
No change
Measurement of emotion
P6-p15
No change
Histology
P15-17
No change
Tunel assay
P17
No change
General observations
P3
No change
General observations
P3
Not Reported:
Circadian sleep/wake cycle, Immune response, Learning & memory, Maternal behavior, Molecular profile, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory
Decreased
View More
Description: Decreased ultrasonic vocalization; decreased number of vocalizations; normal duration, peak frequency, and bandwith; normal incidence of clicks
Exp Paradigm: Automated vocalization monitoring of mother-infant interaction followed by spectrographic analysis
Monitoring ultrasonic vocalizations
P6-p15
Decreased
View More
Description: Decreased size/growth
Exp Paradigm: General observations
General observations
P3
No change
Measurement of emotion
P6-p15
No change
Morris water maze test
3-4 months
Spatial reference memory1
No change
Morris water maze test
3-4 months
General locomotor activity1
No change
Open field test
Unreported
No change
Negative geotaxis test
P6-p15
No change
Righting reflex test
P6-p15
No change
Histology
P15-17
No change
Tunel assay
P17
No change
Foot shock test
3-4 months
No change
General observations
P3
No change
General observations
P3
Not Reported:
Circadian sleep/wake cycle, Immune response, Maternal behavior, Molecular profile, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure
Abnormal
View More
Description: Impaired righting reflex
Exp Paradigm: Measure of time taken by animal to correct itself after being placed on it's back
Righting reflex test
Unreported
Decreased
View More
Description: Decreased cerebellar size and foliation; no other gross morphological abnormalities
Exp Paradigm: Histological analysis
Histology
Unreported
Decreased
View More
Description: Reduced body weight
Exp Paradigm: General observations
General observations
Unreported
Increased
View More
Description: Increased lethality; died by postnatal day 21
Exp Paradigm: General observations
General observations
3 weeks
Protein expression level evidence1
Decreased
View More
Description: Absence of foxp2 protein in extracts
Exp Paradigm: Foxp2 protein expression
Western blot
E16.5
Decreased
View More
Description: Absence of foxp2 gene expression in striatal precursor region
Exp Paradigm: Foxp2 gene expression
Quantitative pcr (qrt-pcr)
E16.5
Not Reported:
Circadian sleep/wake cycle, Communications, Emotion, Immune response, Learning & memory, Maternal behavior, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior
Protein expression level evidence1
Decreased
View More
Description: Decreased foxp2 protein expression in extracts
Exp Paradigm: Foxp2 protein expression
Western blot
E16.5
Decreased
View More
Description: Decreased foxp2 gene expression in striatal precursor region
Exp Paradigm: Foxp2 gene expression
Quantitative pcr (qrt-pcr)
E16.5
No change
General observations
Unreported
No change
Righting reflex test
Unreported
No change
Histology
Unreported
Not Reported:
Circadian sleep/wake cycle, Communications, Emotion, Immune response, Learning & memory, Maternal behavior, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior
Dendritic architecture: spine density1
Increased
View More
Description: Increased dendritic tree length
Exp Paradigm: Golgi-cox staining of three medium spiny neurons
Golgi-cox staining
12 weeks
Increased
View More
Description: Increased long term depression (ltd) after frequency stimulation of cortical fibers
Exp Paradigm: Whole-cell recordings of medium spiny neurons in acute tissue slice at holding potential of -70 mv
Whole-cell patch clamp
P15-p27
Neurotransmitter release1
Abnormal
View More
Description: Decreased dopamine concentration; no change in concentrations of glutamate, serotonin, and gaba
Exp Paradigm: High performance liquid chromatography of frozen slices derived from the frontal cortex, cerebellum, caudate-putamen, nucleus accumbens and globus pallidus
High-performance liquid chromatography (hplc)
Unreported
Decreased
View More
Description: Decreased exploratory activity, distance traveled, and lines crossed.
Exp Paradigm: Modified hole-board test
Hole-board test
Unreported
Decreased
View More
Description: Decreased foxp2 binding motif expression
Exp Paradigm: Gene expression
Gene expression microarray
E16.5, p15-p21, 3 months
No change
Monitoring ultrasonic vocalizations
P4-p13
Cardiovascular development and function1
No change
Electrocardiogram (ecg)
14 weeks
Cardiovascular development and function1
No change
Blood pressure measurement
14 weeks
Cardiovascular development and function1
No change
Blood pressure measurement
15 weeks
Developmental trajectory1
No change
Dual-energy x-ray absorptiometry for bone mineral density measurement
16-17 weeks
No change
General observations
Unreported
Adaptive immune response: leukocyte types1
No change
Elisa
12 weeks
Protein expression level evidence1
No change
Immunohistochemistry
E16.5, p15-p21, 3 months
No change
Grip strength test
10 weeks
Motor coordination and balance1
No change
Accelerating rotarod test
10 weeks
No change
General observations
E16.5, p15-p21, 3 months
No change
Whole-cell patch clamp
P15-p27
No change
Auditory test
6 weeks
No change
Hot plate test
10 weeks
No change
Prepulse inhibition
Unreported
Startle response: acoustic stimulus1
No change
Acoustic startle reflex test
Unreported
No change
Ophthalmological evaluation
11 weeks
Not Reported:
Circadian sleep/wake cycle, Communications, Developmental profile, Emotion, Immune response, Learning & memory, Maternal behavior, Molecular profile, Motor phenotype, Neuroanatomy / ultrastructure / cytoarchitecture, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior
Decreased
View More
Description: Decreased procedural learning indicated by lower rate of spontaneous hurdle crossing
Exp Paradigm: Conditioned avoidance paradigm in a shuttle-box
Active avoidance test
8 weeks
Not Reported:
Circadian sleep/wake cycle, Communications, Developmental profile, Emotion, Immune response, Maternal behavior, Molecular profile, Motor phenotype, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior
Decreased
View More
Description: Decreased procedural learning indicated by lower rate of spontaneous hurdle crossing
Exp Paradigm: Conditioned avoidance paradigm in a shuttle-box
Active avoidance test
8 weeks
Not Reported:
Circadian sleep/wake cycle, Communications, Developmental profile, Emotion, Immune response, Maternal behavior, Molecular profile, Motor phenotype, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior
Decreased
View More
Description: The position or localization of laryngeal connected neurons from layer v in the cortex is altered in foxp2 hets
Exp Paradigm: NA
NA
8-9 weeks
Ultrasonic vocalization: interaction induced: opposite sex stimulus: complex syllables1
Decreased
View More
Description: Decreased length and repertoire of complex song syllables or sequences is observed in foxp2 mice in response to female urine and live female stimulus (separately), indicating a deficient production of complex syllables
Exp Paradigm: NA
Song analysis
8-9 weeks
Ultrasonic vocalization: interaction induced: opposite sex stimulus1
Decreased
View More
Description: Interaction with stimulus female in same cage elicits songs by male foxp2 hets that have significant differences from wild type males, as complex syllable song syntax of transitioning between different syllables (or syntax diversity) is reduced in foxp2 hets when interacting with female mouse in the same cage and authors note that this diversity is known to be preferable to females from other studies
Exp Paradigm: NA
Song analysis
NA
Ultrasonic vocalization: interaction induced: opposite sex stimulus: simple syllables1
No change
Song analysis
8-9 weeks
Ultrasonic vocalization: interaction induced: same sex stimulus1
No change
Song analysis
8-9 weeks
Anatomical projections and connectivity1
No change
Neuronal tracing
8-9 weeks
Neuronal number: laryngeal premotor neurons1
No change
Immunohistochemistry
8-9 weeks
No change
General observations
5 months
Not Reported:
Circadian sleep/wake cycle, Developmental profile, Emotion, Immune response, Learning & memory, Maternal behavior, Molecular profile, Motor phenotype, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior
Summary Statistics:
Total Interactions: 307
Total Publications: 15
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Interactor Symbol
Interactor Name
Interactor Organism
Entrez ID
Uniprot ID
Interaction Type
Evidence
Reference
AES
amino-terminal enhancer of split
166
Q08117
Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
CCNC
cyclin C
892
P24863
Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
CNTNAP2
contactin associated protein-like 2
26047
Q9UHC6
ChIP
Vernes SC , et al. 2008
CSNK1E
casein kinase 1, epsilon
1454
P49674
IP; LC-MS/MS
Huttlin EL , et al. 2015
CTBP1
C-terminal binding protein 1
1487
Q13363
Y2H
Corominas R , et al. 2014
CTBP1
C-terminal binding protein 1
1487
Q13363
Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
CTBP2
C-terminal binding protein 2
1488
P56545
Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
DSG4
Desmoglein-4
147409
Q86SJ6-2
IP; LC-MS/MS
Huttlin EL , et al. 2015
DUSP14
dual specificity phosphatase 14
11072
O95147
IP; LC-MS/MS
Huttlin EL , et al. 2015
EFHD1
EF-hand domain family, member D1
80303
Q9BUP0
IP; LC-MS/MS
Huttlin EL , et al. 2015
FAM124A
family with sequence similarity 124A
220108
Q86V42
Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
FMR1
fragile X mental retardation 1
2332
G8JLE9
PAR-CLIP; RNA immunoprecipitation (RIP)
Ascano M Jr , et al. 2012
FOXP1
forkhead box P1
27086
Q9H334
IP; LC-MS/MS
Huttlin EL , et al. 2015
FOXP3
Forkhead box protein P3
50943
Q9BZS1
IP; LC-MS/MS
Huttlin EL , et al. 2015
FOXP4
forkhead box P4
116113
Q8IVH2
IP; LC-MS/MS
Huttlin EL , et al. 2015
HIST2H2AC
histone cluster 2, H2ac
8338
Q16777
IP; LC-MS/MS
Huttlin EL , et al. 2015
LRRC15
leucine rich repeat containing 15
131578
Q8TF66
IP; LC-MS/MS
Huttlin EL , et al. 2015
MAPK3
mitogen-activated protein kinase 3
5595
P27361
Y2H
Corominas R , et al. 2014
MEF2C
myocyte enhancer factor 2C
4208
Q06413
ChIP-qPCR; Luciferase reporter assay
Chen YC , et al. 2016
MET
met proto-oncogene (hepatocyte growth factor receptor)
4233
P08581
EMSA; ChIP; WB
Mukamel Z , et al. 2011
MRPL12
mitochondrial ribosomal protein L12
6182
P52815
IP; LC-MS/MS
Huttlin EL , et al. 2015
PAX6
paired box 6
5080
P26367
ChIP; Zebrafish reporter transgenic studies; IP/WB
Coutinho P , et al. 2011
PIN1
peptidylprolyl cis/trans isomerase, NIMA-interacting 1
5300
Q13526
Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
PKP3
Plakophilin-3
11187
Q9Y446
IP; LC-MS/MS
Huttlin EL , et al. 2015
PLAUR
plasminogen activator, urokinase receptor
5329
Q03405
qRT-PCR; Luciferase reporter assay; EMSA
Roll P , et al. 2010
RPIA
ribose 5-phosphate isomerase A
22934
P49247
Y2H
Corominas R , et al. 2014
RPIA
ribose 5-phosphate isomerase A
22934
P49247
Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
S100A2
S100 calcium binding protein A2
6273
P29034
IP; LC-MS/MS
Huttlin EL , et al. 2015
SDCBP
syndecan binding protein (syntenin)
6386
O00560
Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
SELENBP1
selenium binding protein 1
8991
Q13228
IP; LC-MS/MS
Huttlin EL , et al. 2015
SP4
Sp4 transcription factor
6671
Q02446
Y2H
Corominas R , et al. 2014
SP4
Sp4 transcription factor
6671
Q02446
Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
SRPX2
sushi-repeat containing protein, X-linked 2
27286
O60687
qRT-PCR; Luciferase reporter assay; EMSA
Roll P , et al. 2010
TBR1
T-box, brain, 1
10716
Q16650
Bioluminescence resonance energy transfer assay; Co-localization
Deriziotis P , et al. 2014
TSACC
TSSK6 activating co-chaperone
128229
Q96A04
Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
VSIG8
V-set and immunoglobulin domain-containing protein 8
284677
Q5VU13
IP; LC-MS/MS
Huttlin EL , et al. 2015
0610006I08RIK
transmembrane protein 223
66836
Q9CQE2
ChIP
Vernes SC , et al. 2011
1110064P04RIK
AHA1, activator of heat shock protein ATPase homolog 2 (yeast)
268390
Q8N9S3
ChIP
Vernes SC , et al. 2011
1200013P24RIK
N-acetyltransferase 15 (GCN5-related, putative)
74763
Q9DBU2
ChIP
Vernes SC , et al. 2011
1300010M03RIK
family with sequence similarity 134, member C
67998
Q9CQV4
ChIP
Vernes SC , et al. 2011
1700009P03RIK
RNA binding motif protein 26
74213
Q6NZN0
ChIP
Vernes SC , et al. 2011
1700054O13RIK
RIKEN cDNA 1700054O13 gene
67334
A2AF56
ChIP
Vernes SC , et al. 2011
1810011O10RIK
RIKEN cDNA 1810011O10 gene
69068
Q9D915
ChIP
Vernes SC , et al. 2011
1810037C20RIK
family with sequence similarity 3, member A
66294
Q9D8T0
ChIP
Vernes SC , et al. 2011
2010321M09RIK
RIKEN cDNA 2010321M09 gene
69882
Q8R3P6
ChIP
Vernes SC , et al. 2011
2200002K05RIK
RIKEN cDNA 2200002K05 gene
69137
Q9D806
ChIP
Vernes SC , et al. 2011
2310028H24RIK
RIKEN cDNA 2310028H24 gene
71901
A2ANP1
ChIP
Vernes SC , et al. 2011
2310057M21RIK
RIKEN cDNA 2310057M21 gene
68277
Q9D2Q3
ChIP
Vernes SC , et al. 2011
2310061I09RIK
coiled-coil domain containing 115
69668
Q8VE99
ChIP
Vernes SC , et al. 2011
2510048L02RIK
coiled-coil domain containing 159
67119
Q8C963
ChIP
Vernes SC , et al. 2011
2810002I04RIK
family with sequence similarity 164, member C
72350
Q8CCG1
ChIP
Vernes SC , et al. 2011
2810430M08RIK
ribosomal RNA processing 15 homolog (S. cerevisiae)
67223
Q9CYX7
ChIP
Vernes SC , et al. 2011
2900041A09RIK
tubulin polymerization promoting protein
72948
Q7TQD2
ChIP
Vernes SC , et al. 2011
3110043J09RIK
Rho GTPase activating protein 8
73167
Q9CXP4
ChIP
Vernes SC , et al. 2011
3200002M19RIK
RIKEN cDNA 3200002M19 gene
75430
P60007
ChIP
Vernes SC , et al. 2011
4632428N05RIK
RIKEN cDNA 4632428N05 gene
74048
E9PUF5
ChIP
Vernes SC , et al. 2011
4930408O21RIK
PDZ domain containing 9
67983
Q9D9M4
ChIP
Vernes SC , et al. 2011
4933403G14RIK
RIKEN cDNA 4933403G14 gene
74393
Q8BJS7
ChIP
Vernes SC , et al. 2011
8430419L09RIK
RIKEN cDNA 8430419L09 gene
74525
Q8BYI8
ChIP
Vernes SC , et al. 2011
9230117E20RIK
serine peptidase inhibitor, Kazal type 11
78242
Q9D256
ChIP
Vernes SC , et al. 2011
A130033B22
predicted gene 5094
328839
N/A
ChIP
Vernes SC , et al. 2011
A530082C11RIK
solute carrier family 35, member E2
320541
Q8C811
ChIP
Vernes SC , et al. 2011
A730085E03RIK
RIKEN cDNA A730085E03 gene
328983
N/A
ChIP
Vernes SC , et al. 2011
A930001M12RIK
transmembrane protein 215
320500
A7E1Z1
ChIP
Vernes SC , et al. 2011
AARD
alanine and arginine rich domain containing protein
239435
Q811W1
ChIP
Vernes SC , et al. 2011
ABCA6
ATP-binding cassette, sub-family A (ABC1), member 6
76184
Q8K441
ChIP
Vernes SC , et al. 2011
ACYP1
acylphosphatase 1, erythrocyte (common) type
66204
P56376
ChIP
Vernes SC , et al. 2011
ALKBH5
alkB, alkylation repair homolog 5 (E. coli)
268420
Q3TSG4
ChIP
Vernes SC , et al. 2011
ALOX12E
arachidonate lipoxygenase, epidermal
11685
P55249
ChIP
Vernes SC , et al. 2011
ARL11
ADP-ribosylation factor-like 11
219144
Q6P3A9
ChIP
Vernes SC , et al. 2011
ARPM1
actin related protein M1
76652
Q8BXF8
ChIP
Vernes SC , et al. 2011
ARRDC2
arrestin domain containing 2
70807
Q9D668
ChIP
Vernes SC , et al. 2011
ATP1B1
ATPase, Na+/K+ transporting, beta 1 polypeptide
11931
P14094
ChIP
Vernes SC , et al. 2011
ATP5A1
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
11946
Q03265
ChIP
Vernes SC , et al. 2011
Auts2
autism susceptibility candidate 2
319974
Q6PED7
ChIP-Seq
Oksenberg N , et al. 2014
BARD1
BRCA1 associated RING domain 1
12021
O70445
ChIP
Vernes SC , et al. 2011
BATF2
basic leucine zipper transcription factor, ATF-like 2
74481
Q8R1H8
ChIP
Vernes SC , et al. 2011
BC019537
solute carrier family 17, member 9
228993
Q8VCL5
ChIP
Vernes SC , et al. 2011
BC021442
zinc finger protein 758
224598
E9Q462
ChIP
Vernes SC , et al. 2011
BC035954
cDNA sequence BC035954
194162
N/A
ChIP
Vernes SC , et al. 2011
BC050188
tripartite motif family-like 1
244448
Q8BVP1
ChIP
Vernes SC , et al. 2011
BET1
blocked early in transport 1 homolog (S. cerevisiae)
12068
O35623
ChIP
Vernes SC , et al. 2011
BLMH
bleomycin hydrolase
104184
Q8R016
ChIP
Vernes SC , et al. 2011
C78339
expressed sequence C78339
97863
Q3URQ4
ChIP
Vernes SC , et al. 2011
CACNA2D1
calcium channel, voltage-dependent, alpha2/delta subunit 1
12293
O08532
ChIP
Vernes SC , et al. 2011
CATSPER3
cation channel, sperm associated 3
76856
Q80W99
ChIP
Vernes SC , et al. 2011
CBLN2
cerebellin 2 precursor protein
12405
Q8BGU2
ChIP
Vernes SC , et al. 2011
CCDC80
coiled-coil domain containing 80
67896
Q8R2G6
ChIP
Vernes SC , et al. 2011
CCNL2
cyclin L2
56036
Q9JJA7
ChIP
Vernes SC , et al. 2011
CD53
CD53 antigen
12508
Q61451
ChIP
Vernes SC , et al. 2011
CD59A
CD59a antigen
12509
O55186
ChIP
Vernes SC , et al. 2011
CDC2L6
cyclin-dependent kinase 19
78334
Q8BWD8
ChIP
Vernes SC , et al. 2011
CDK8
cyclin-dependent kinase 8
264064
Q8R3L8
ChIP
Vernes SC , et al. 2011
CDYL2
chromodomain protein, Y chromosome-like 2
75796
Q9D5D8
ChIP
Vernes SC , et al. 2011
CES2
carboxylesterase 2C
234671
Q91WG0
ChIP
Vernes SC , et al. 2011
CGA
glycoprotein hormones, alpha subunit
12640
P01216
ChIP
Vernes SC , et al. 2011
CHRNA1
cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
11435
P04756
ChIP
Vernes SC , et al. 2011
CLASP2
CLIP associating protein 2
76499
Q8BRT1
ChIP
Vernes SC , et al. 2011
CLCN1
chloride channel 1
12723
Q64347
ChIP
Vernes SC , et al. 2011
COBL
cordon-bleu
12808
Q5NBX1
ChIP
Vernes SC , et al. 2011
COL24A1
collagen, type XXIV, alpha 1
71355
Q30D77
ChIP
Vernes SC , et al. 2011
COL3A1
collagen, type III, alpha 1
12825
P08121
ChIP
Vernes SC , et al. 2011
CSTF3
cleavage stimulation factor, 3' pre-RNA, subunit 3
228410
Q99LI7
ChIP
Vernes SC , et al. 2011
CTBP1
C-terminal binding protein 1
13016
O88712
Y2H; IP/WB; Luciferase reporter assay
Li S , et al. 2004
CTRB1
chymotrypsinogen B1
66473
Q9CR35
ChIP
Vernes SC , et al. 2011
CUL1
cullin 1
26965
Q9WTX6
ChIP
Vernes SC , et al. 2011
CWF19L2
CWF19-like 2, cell cycle control (S. pombe)
244672
Q8BG79
ChIP
Vernes SC , et al. 2011
CYCS
cytochrome c, somatic
13063
P62897
ChIP
Vernes SC , et al. 2011
CYR61
cysteine rich protein 61
16007
P18406
ChIP
Vernes SC , et al. 2011
D030041N04RIK
leucine zipper-EF-hand containing transmembrane protein 2
270035
Q7TNU7
ChIP
Vernes SC , et al. 2011
D11ERTD730E
SLU7 splicing factor homolog (S. cerevisiae)
193116
Q8BHJ9
ChIP
Vernes SC , et al. 2011
D330045A20RIK
RIKEN cDNA D330045A20 gene
102871
Q8C779
ChIP
Vernes SC , et al. 2011
D830007B15RIK
shisa homolog 3 (Xenopus laevis)
330096
Q3UPR0
ChIP
Vernes SC , et al. 2011
DDX52
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
78394
Q3TKX4
ChIP
Vernes SC , et al. 2011
DMBT1
deleted in malignant brain tumors 1
12945
Q60997
ChIP
Vernes SC , et al. 2011
DNAJC18
DnaJ (Hsp40) homolog, subfamily C, member 18
76594
Q9CZJ9
ChIP
Vernes SC , et al. 2011
DOCK8
dedicator of cytokinesis 8
76088
Q8C147
ChIP
Vernes SC , et al. 2011
DSPG3
epiphycan
13516
P70186
ChIP
Vernes SC , et al. 2011
DTNA
dystrobrevin alpha
13527
Q9D2N4
ChIP
Vernes SC , et al. 2011
DTNB
dystrobrevin, beta
13528
O70585
ChIP
Vernes SC , et al. 2011
ECHDC1
enoyl Coenzyme A hydratase domain containing 1
52665
Q9D9V3
ChIP
Vernes SC , et al. 2011
EDA2R
ectodysplasin A2 receptor
245527
Q8BX35
ChIP
Vernes SC , et al. 2011
EDNRA
endothelin receptor type A
13617
Q61614
ChIP
Vernes SC , et al. 2011
EIF3S10
eukaryotic translation initiation factor 3, subunit A
13669
P23116
ChIP
Vernes SC , et al. 2011
ELAVL4
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
15572
Q61701
ChIP
Vernes SC , et al. 2011
ELK3
ELK3, member of ETS oncogene family
13713
P41971
ChIP
Vernes SC , et al. 2011
ELP3
elongation protein 3 homolog (S. cerevisiae)
74195
Q9CZX0
ChIP
Vernes SC , et al. 2011
EMX2
empty spiracles homolog 2 (Drosophila)
13797
Q04744
ChIP
Vernes SC , et al. 2011
EPC1
enhancer of polycomb homolog 1 (Drosophila)
13831
Q8C9X6
ChIP
Vernes SC , et al. 2011
ETV1
ets variant gene 1
14009
P41164
ChIP
Vernes SC , et al. 2011
EZH2
enhancer of zeste homolog 2 (Drosophila)
14056
Q61188
ChIP
Vernes SC , et al. 2011
FBXL4
F-box and leucine-rich repeat protein 4
269514
Q8BH70
ChIP
Vernes SC , et al. 2011
FGF1
fibroblast growth factor 1
14164
P61148
ChIP
Vernes SC , et al. 2011
FMO2
flavin containing monooxygenase 2
55990
Q8K2I3
ChIP
Vernes SC , et al. 2011
FNBP1L
formin binding protein 1-like
214459
Q8K012
ChIP
Vernes SC , et al. 2011
FOXP1
forkhead box P1
108655
P58462
IP/WB
Li S , et al. 2004
FOXP2
forkhead box P2
114142
P58463
IP/WB
Li S , et al. 2004
FOXP4
forkhead box P4
74123
Q9DBY0
IP/WB
Li S , et al. 2004
FUT8
fucosyltransferase 8
53618
Q9WTS2
ChIP
Vernes SC , et al. 2011
FXYD2
FXYD domain-containing ion transport regulator 2
11936
Q04646
ChIP
Vernes SC , et al. 2011
GALNACT2
chondroitin sulfate N-acetylgalactosaminyltransferase 2
78752
Q8C1F4
ChIP
Vernes SC , et al. 2011
GATA6
GATA binding protein 6
14465
Q61169
ChIP
Vernes SC , et al. 2011
GATAD2B
GATA zinc finger domain containing 2B
57459
Q8WXI9
Y2H; IP/WB; GST
Chokas AL , et al. 2010
GDPD1
glycerophosphodiester phosphodiesterase domain containing 1
66569
Q9CRY7
ChIP
Vernes SC , et al. 2011
GGA1
golgi associated, gamma adaptin ear containing, ARF binding protein 1
106039
Q8R0H9
ChIP
Vernes SC , et al. 2011
GGN
gametogenetin
243897
Q80WJ1
ChIP
Vernes SC , et al. 2011
GM1553
predicted gene 1553
432480
Q66VB7
ChIP
Vernes SC , et al. 2011
GNAI1
guanine nucleotide binding protein (G protein), alpha inhibiting 1
14677
B2RSH2
ChIP
Vernes SC , et al. 2011
GPM6A
glycoprotein m6a
234267
P35802
ChIP
Vernes SC , et al. 2011
HIST1H2AB
histone cluster 1, H2ab
319172
P22752
ChIP
Vernes SC , et al. 2011
HIST1H4H
histone cluster 1, H4h
69386
P62806
ChIP
Vernes SC , et al. 2011
HIST2H2BE
histone cluster 2, H2be
319190
Q64524
ChIP
Vernes SC , et al. 2011
HIST2H3C1
histone cluster 2, H3c1
15077
P84228
ChIP
Vernes SC , et al. 2011
HRSP12
heat-responsive protein 12
15473
P52760
ChIP
Vernes SC , et al. 2011
HYOU1
hypoxia up-regulated 1
12282
Q9JKR6
ChIP
Vernes SC , et al. 2011
IL12B
interleukin 12b
16160
P43432
ChIP
Vernes SC , et al. 2011
ISLR2
immunoglobulin superfamily containing leucine-rich repeat 2
320563
Q5RKR3
ChIP
Vernes SC , et al. 2011
JPH4
junctophilin 4
319984
Q80WT0
ChIP
Vernes SC , et al. 2011
KBTBD2
kelch repeat and BTB (POZ) domain containing 2
210973
Q6ZPP6
ChIP
Vernes SC , et al. 2011
KCNA4
potassium voltage-gated channel, shaker-related subfamily, member 4
16492
Q61423
ChIP
Vernes SC , et al. 2011
KCTD4
potassium channel tetramerisation domain containing 4
67516
Q9D7X1
ChIP
Vernes SC , et al. 2011
KEL
Kell blood group
23925
Q9EQF2
ChIP
Vernes SC , et al. 2011
KIF20A
kinesin family member 20A
19348
P97329
ChIP
Vernes SC , et al. 2011
KLF6
Kruppel-like factor 6
23849
Q8BPQ2
ChIP
Vernes SC , et al. 2011
KLRE1
killer cell lectin-like receptor family E member 1
243655
Q8CJC7
ChIP
Vernes SC , et al. 2011
LDHB
lactate dehydrogenase B
16832
P16125
ChIP
Vernes SC , et al. 2011
LIPC
lipase, hepatic
15450
P27656
ChIP
Vernes SC , et al. 2011
LOC433178
serine peptidase inhibitor, Kazal type 14
433178
B9EJP9
ChIP
Vernes SC , et al. 2011
LOH12CR1
loss of heterozygosity, 12, chromosomal region 1 homolog (human)
67774
Q9D920
ChIP
Vernes SC , et al. 2011
MAFK
v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)
17135
Q61827
ChIP
Vernes SC , et al. 2011
MAGEE1
melanoma antigen, family E, 1
107528
Q6PCZ4
ChIP
Vernes SC , et al. 2011
MAGOH
mago-nashi homolog, proliferation-associated (Drosophila)
17149
P61327
ChIP
Vernes SC , et al. 2011
MALT1
mucosa associated lymphoid tissue lymphoma translocation gene 1
240354
Q2TBA3
ChIP
Vernes SC , et al. 2011
MANSC1
MANSC domain containing 1
67729
Q9CR33
ChIP
Vernes SC , et al. 2011
MAPKAPK2
MAP kinase-activated protein kinase 2
17164
P49138
ChIP
Vernes SC , et al. 2011
MATR3
matrin 3
17184
Q8K310
ChIP
Vernes SC , et al. 2011
MCPH1
microcephaly, primary autosomal recessive 1
244329
Q7TT79
ChIP
Vernes SC , et al. 2011
MKS1
Meckel syndrome, type 1
380718
Q5SW45
ChIP
Vernes SC , et al. 2011
MMU-LET-7A-1
microRNA let7a-1
387244
N/A
ChIP
Vernes SC , et al. 2011
MMU-MIR-137
microRNA 137
387155
N/A
ChIP
Vernes SC , et al. 2011
MMU-MIR-19B-1
microRNA 19b-2
387195
N/A
ChIP
Vernes SC , et al. 2011
MMU-MIR-469
microRNA 469
723872
N/A
ChIP
Vernes SC , et al. 2011
MTERF
mitochondrial transcription termination factor
545725
Q8CHZ9
ChIP
Vernes SC , et al. 2011
MYNN
myoneurin
80732
Q99MD8
ChIP
Vernes SC , et al. 2011
NAALAD2
N-acetylated alpha-linked acidic dipeptidase 2
72560
Q9CZR2
ChIP
Vernes SC , et al. 2011
NEUROD6
neurogenic differentiation 6
11922
P48986
ChIP
Vernes SC , et al. 2011
NFAT5
nuclear factor of activated T-cells 5
54446
Q9WV30
ChIP
Vernes SC , et al. 2011
NPLOC4
nuclear protein localization 4 homolog (S. cerevisiae)
217365
P60670
ChIP
Vernes SC , et al. 2011
NPTN
neuroplastin
20320
P97300
ChIP
Vernes SC , et al. 2011
NPY6R
neuropeptide Y receptor Y6
18169
Q61212
ChIP
Vernes SC , et al. 2011
NRN1
neuritin 1
68404
Q8CFV4
ChIP
Vernes SC , et al. 2011
NSG1
neuron specific gene family member 1
18196
Q62092
ChIP
Vernes SC , et al. 2011
OC90
otoconin 90
18256
Q9Z0L3
ChIP
Vernes SC , et al. 2011
OLFR113
olfactory receptor 113
258286
Q8VEU4
ChIP
Vernes SC , et al. 2011
OLFR1184
olfactory receptor 1184
258820
Q8VG86
ChIP
Vernes SC , et al. 2011
OLFR131
olfactory receptor 131
258867
Q8VGC8
ChIP
Vernes SC , et al. 2011
OLFR1388
olfactory receptor 1388
258459
Q8VFA3
ChIP
Vernes SC , et al. 2011
OLFR139
olfactory receptor 139
259005
Q60891
ChIP
Vernes SC , et al. 2011
OLFR1465
olfactory receptor 1465
258121
Q7TQR2
ChIP
Vernes SC , et al. 2011
OLFR26
olfactory receptor 26
18324
Q7TRB7
ChIP
Vernes SC , et al. 2011
OLFR284
olfactory receptor 284
258278
Q8VET7
ChIP
Vernes SC , et al. 2011
OLFR305
olfactory receptor 305
258609
Q7TS02
ChIP
Vernes SC , et al. 2011
OLFR461
olfactory receptor 461
258380
Q8VF30
ChIP
Vernes SC , et al. 2011
OLFR487
olfactory receptor 487
258042
Q7TRU9
ChIP
Vernes SC , et al. 2011
OLFR711
olfactory receptor 711
259037
Q9EPG2
ChIP
Vernes SC , et al. 2011
OLFR723
olfactory receptor 723
259147
E9PZU2
ChIP
Vernes SC , et al. 2011
OLFR978
olfactory receptor 978
259109
E9Q985
ChIP
Vernes SC , et al. 2011
ORC6L
origin recognition complex, subunit 6
56452
Q9WUJ8
ChIP
Vernes SC , et al. 2011
PACS1
phosphofurin acidic cluster sorting protein 1
107975
Q8K212
ChIP
Vernes SC , et al. 2011
PAK3
p21 protein (Cdc42/Rac)-activated kinase 3
18481
Q61036
ChIP
Vernes SC , et al. 2011
PAQR5
progestin and adipoQ receptor family member V
74090
Q9DCU0
ChIP
Vernes SC , et al. 2011
PBEF1
nicotinamide phosphoribosyltransferase
59027
Q99KQ4
ChIP
Vernes SC , et al. 2011
PCDH20
protocadherin 20
219257
Q8BIZ0
ChIP
Vernes SC , et al. 2011
PCDHA2
protocadherin alpha 2
353234
Q05C01
ChIP
Vernes SC , et al. 2011
PCOLN3
chromatin modifying protein 1A
234852
Q921W0
ChIP
Vernes SC , et al. 2011
PDCD10
programmed cell death 10
56426
Q8VE70
ChIP
Vernes SC , et al. 2011
PDHX
pyruvate dehydrogenase complex, component X
27402
Q8BKZ9
ChIP
Vernes SC , et al. 2011
PGAM5
phosphoglycerate mutase family member 5
72542
Q8BX10
ChIP
Vernes SC , et al. 2011
PI16
peptidase inhibitor 16
74116
Q9ET66
ChIP
Vernes SC , et al. 2011
PIGA
phosphatidylinositol glycan anchor biosynthesis, class A
18700
Q64323
ChIP
Vernes SC , et al. 2011
PIGC
phosphatidylinositol glycan anchor biosynthesis, class C
67292
Q9CXR4
ChIP
Vernes SC , et al. 2011
PIK3R1
phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
18708
P26450
ChIP
Vernes SC , et al. 2011
PKDREJ
polycystic kidney disease (polycystin) and REJ (sperm receptor for egg jelly homolog, sea urchin)
18766
Q9Z0T6
ChIP
Vernes SC , et al. 2011
PLA2G10
phospholipase A2, group X
26565
Q9QXX3
ChIP
Vernes SC , et al. 2011
PLAG1
pleiomorphic adenoma gene 1
56711
Q9QYE0
ChIP
Vernes SC , et al. 2011
PLK2
polo-like kinase 2 (Drosophila)
20620
P53351
ChIP
Vernes SC , et al. 2011
PNRC2
proline-rich nuclear receptor coactivator 2
52830
Q9CR73
ChIP
Vernes SC , et al. 2011
PON2
paraoxonase 2
330260
Q62086
ChIP
Vernes SC , et al. 2011
POT1
protection of telomeres 1 homolog (S. pombe)
25913
Q9NUX5
Y2H; IP/WB
Tanabe Y , et al. 2011
POU2F1
POU domain, class 2, transcription factor 1
18986
P25425
ChIP
Vernes SC , et al. 2011
PPIL4
peptidylprolyl isomerase (cyclophilin)-like 4
67418
Q9CXG3
ChIP
Vernes SC , et al. 2011
PRCP
prolylcarboxypeptidase (angiotensinase C)
72461
Q7TMR0
ChIP
Vernes SC , et al. 2011
PRLPM
prolactin family 2, subfamily a, member 1
56635
Q9JHK0
ChIP
Vernes SC , et al. 2011
PRMT4
coactivator-associated arginine methyltransferase 1
59035
Q9WVG6
ChIP
Vernes SC , et al. 2011
PRR3
proline-rich polypeptide 3
75210
Q811B5
ChIP
Vernes SC , et al. 2011
PRSS2
protease, serine, 2
22072
P07146
ChIP
Vernes SC , et al. 2011
PSMA3
proteasome (prosome, macropain) subunit, alpha type 3
19167
O70435
ChIP
Vernes SC , et al. 2011
PSMD6
proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
66413
Q99JI4
ChIP
Vernes SC , et al. 2011
PSTK
phosphoseryl-tRNA kinase
214580
Q8BP74
ChIP
Vernes SC , et al. 2011
PTTG1
pituitary tumor-transforming gene 1
30939
Q9CQJ7
ChIP
Vernes SC , et al. 2011
QTRTD1
queuine tRNA-ribosyltransferase domain containing 1
106248
B8ZXI1
ChIP
Vernes SC , et al. 2011
RAB30
RAB30, member RAS oncogene family
75985
Q923S9
ChIP
Vernes SC , et al. 2011
RAB3C
RAB3C, member RAS oncogene family
67295
P62823
ChIP
Vernes SC , et al. 2011
RAB9B
RAB9B, member RAS oncogene family
319642
Q8BHH2
ChIP
Vernes SC , et al. 2011
RBFOX1
RNA binding protein, fox-1 homolog (C. elegans) 1
268859
Q9JJ43
ChIP
Vernes SC , et al. 2011
RBM7
RNA binding motif protein 7
67010
Q9CQT2
ChIP
Vernes SC , et al. 2011
RHOJ
ras homolog gene family, member J
80837
Q9ER71
ChIP
Vernes SC , et al. 2011
RHOT2
ras homolog gene family, member T2
214952
Q8JZN7
ChIP
Vernes SC , et al. 2011
RLN1
relaxin 1
19773
A2RTV8
ChIP
Vernes SC , et al. 2011
RNF17
ring finger protein 17
30054
Q99MV7
ChIP
Vernes SC , et al. 2011
ROBO4
roundabout homolog 4 (Drosophila)
74144
Q8C310
ChIP
Vernes SC , et al. 2011
RPA3
replication protein A3
68240
Q9CQ71
ChIP
Vernes SC , et al. 2011
SCN2B
sodium channel, voltage-gated, type II, beta
72821
Q56A07
ChIP
Vernes SC , et al. 2011
SDCCAG1
nuclear export mediator factor
66244
Q8CCP0
ChIP
Vernes SC , et al. 2011
SEMA4F
sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
20355
Q9Z123
ChIP
Vernes SC , et al. 2011
SEMA6D
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
214968
Q76KF0
ChIP
Vernes SC , et al. 2011
SF1
splicing factor 1
22668
Q64213
ChIP
Vernes SC , et al. 2011
SIRT5
sirtuin 5 (silent mating type information regulation 2 homolog) 5 (S. cerevisiae)
68346
Q8K2C6
ChIP
Vernes SC , et al. 2011
SLC12A2
solute carrier family 12, member 2
20496
P55012
ChIP
Vernes SC , et al. 2011
SLC12A9
solute carrier family 12 (potassium/chloride transporters), member 9
83704
Q99MR3
ChIP
Vernes SC , et al. 2011
SLC13A3
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
114644
Q91Y63
ChIP
Vernes SC , et al. 2011
SLC14A1
solute carrier family 14 (urea transporter), member 1
108052
Q8VHL0
ChIP
Vernes SC , et al. 2011
SLC22A6
solute carrier family 22 (organic anion transporter), member 6
18399
Q8VC69
ChIP
Vernes SC , et al. 2011
SLC24A1
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
214111
Q91WD8
ChIP
Vernes SC , et al. 2011
SLC25A36
solute carrier family 25, member 36
192287
Q922G0
ChIP
Vernes SC , et al. 2011
SLC4A1AP
solute carrier family 4 (anion exchanger), member 1, adaptor protein
20534
E9Q585
ChIP
Vernes SC , et al. 2011
SLC4A3
solute carrier family 4 (anion exchanger), member 3
20536
P16283
ChIP
Vernes SC , et al. 2011
SMC5L1
structural maintenance of chromosomes 5
226026
Q8CG46
ChIP
Vernes SC , et al. 2011
SMURF1
SMAD specific E3 ubiquitin protein ligase 1
75788
Q9CUN6
ChIP
Vernes SC , et al. 2011
SPATA17
spermatogenesis associated 17
74717
Q9D552
ChIP
Vernes SC , et al. 2011
SPESP1
sperm equatorial segment protein 1
66712
Q9D5A0
ChIP
Vernes SC , et al. 2011
SRI
sorcin
109552
Q6P069
ChIP
Vernes SC , et al. 2011
ST3GAL6
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
54613
Q8VIB3
ChIP
Vernes SC , et al. 2011
STAM
signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
20844
P70297
ChIP
Vernes SC , et al. 2011
STARD4
StAR-related lipid transfer (START) domain containing 4
170459
Q99JV5
ChIP
Vernes SC , et al. 2011
STEAP1
six transmembrane epithelial antigen of the prostate 1
70358
Q9CWR7
ChIP
Vernes SC , et al. 2011
SV2A
synaptic vesicle glycoprotein 2 a
64051
Q9JIS5
ChIP
Vernes SC , et al. 2011
SVS1
seminal vesicle secretory protein 1
243377
Q6WIZ7
ChIP
Vernes SC , et al. 2011
SYTL5
synaptotagmin-like 5
236643
Q80T23
ChIP
Vernes SC , et al. 2011
TAAR5
trace amine-associated receptor 5
215854
Q5QD14
ChIP
Vernes SC , et al. 2011
TANK
TRAF family member-associated Nf-kappa B activator
21353
P70347
ChIP
Vernes SC , et al. 2011
TBC1D19
TBC1 domain family, member 19
67249
Q8VDV7
ChIP
Vernes SC , et al. 2011
TCFAP2D
transcription factor AP-2, delta
226896
Q91ZK0
ChIP
Vernes SC , et al. 2011
TCTE1
t-complex-associated testis expressed 1
21645
A6H639
ChIP
Vernes SC , et al. 2011
TDP1
tyrosyl-DNA phosphodiesterase 1
104884
Q8BJ37
ChIP
Vernes SC , et al. 2011
TDRD3
tudor domain containing 3
219249
Q91W18
ChIP
Vernes SC , et al. 2011
TMBIM4
transmembrane BAX inhibitor motif containing 4
68212
Q9DA39
ChIP
Vernes SC , et al. 2011
TMEM38B
transmembrane protein 38B
52076
Q9DAV9
ChIP
Vernes SC , et al. 2011
TMEM55A
transmembrane protein 55A
72519
Q9CZX7
ChIP
Vernes SC , et al. 2011
TRAF3IP3
TRAF3 interacting protein 3
215243
Q8C0G2
ChIP
Vernes SC , et al. 2011
TSPAN10
tetraspanin 10
208634
Q8VCF5
ChIP
Vernes SC , et al. 2011
TSPAN13
tetraspanin 13
66109
Q9D8C2
ChIP
Vernes SC , et al. 2011
UBL7
ubiquitin-like 7 (bone marrow stromal cell-derived)
69459
Q91W67
ChIP
Vernes SC , et al. 2011
UMPS
uridine monophosphate synthetase
22247
P13439
ChIP
Vernes SC , et al. 2011
UNC50
unc-50 homolog (C. elegans)
67387
Q9CQ61
ChIP
Vernes SC , et al. 2011
USPL1
ubiquitin specific peptidase like 1
231915
Q3ULM6
ChIP
Vernes SC , et al. 2011
V1RB1
vomeronasal 1 receptor 50
113852
Q9EP51
ChIP
Vernes SC , et al. 2011
WASF1
WASP family 1
83767
Q8R5H6
ChIP
Vernes SC , et al. 2011
WBP5
WW domain binding protein 5
22381
Q9DD24
ChIP
Vernes SC , et al. 2011
YWHAH
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
22629
P68510
ChIP
Vernes SC , et al. 2011
ZBTB5
zinc finger and BTB domain containing 5
230119
Q7TQG0
ChIP
Vernes SC , et al. 2011
ZC3H11A
zinc finger CCCH type containing 11A
70579
Q6NZF1
ChIP
Vernes SC , et al. 2011
ZCCHC5
zinc finger, CCHC domain containing 5
213436
Q6P1Y1
ChIP
Vernes SC , et al. 2011
ZFP248
zinc finger protein 248
72720
Q640N4
ChIP
Vernes SC , et al. 2011
ZFP36
zinc finger protein 36
22695
P22893
ChIP
Vernes SC , et al. 2011
ZFP521
zinc finger protein 521
225207
Q6KAS7
ChIP
Vernes SC , et al. 2011
ZSWIM2
zinc finger, SWIM domain containing 2
71861
Q9D9X6
ChIP
Vernes SC , et al. 2011