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Relevance to Autism

Two SNPs in the FGA gene (rs2070025 and rs2070011) showed association with ASD in a Korean case-control population (Ro et al., 2013).

Molecular Function

The protein encoded by this gene is the alpha component of fibrinogen, a blood-borne glycoprotein comprised of three pairs of nonidentical polypeptide chains. Following vascular injury, fibrinogen is cleaved by thrombin to form fibrin which is the most abundant component of blood clots. In addition, various cleavage products of fibrinogen and fibrin regulate cell adhesion and spreading, display vasoconstrictor and chemotactic activities, and are mitogens for several cell types. Mutations in this gene lead to several disorders, including dysfibrinogenemia, hypofibrinogenemia, afibrinogenemia and renal amyloidosis.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Association of the FGA and SLC6A4 genes with autistic spectrum disorder in a Korean population.
ASD
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Support
Integrating de novo and inherited variants in 42
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN585R001 
 stop_gained 
 c.385C>T 
 p.Arg129Ter 
 Familial 
 Paternal 
 Multiplex 
 GEN585R002 
 missense_variant 
 c.428G>A 
 p.Arg143His 
 Unknown 
  
  
 GEN585R003 
 missense_variant 
 c.696G>T 
 p.Leu232Phe 
 Unknown 
  
  
 GEN585R004 
 synonymous_variant 
 c.1206C>T 
 p.Asn402%3D 
 De novo 
  
  
 GEN585R005 
 frameshift_variant 
 c.117del 
 p.Val40TrpfsTer31 
 Familial 
 Maternal 
 Multiplex 

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN585C001 
 missense_variant 
 rs2070025 
 c.16A>G 
 p.Ile6Val 
 195 ASD cases & 305 controls from Korea 
 Discovery 
 GEN585C002 
 5_prime_UTR_variant 
 rs2070011 
 c.-58A>G 
 A/G 
 195 ASD cases & 305 controls from Korea 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
4
Duplication
 1
 
4
Duplication
 1
 
4
Duplication
 1
 
4
Duplication
 1
 
4
Duplication
 1
 
4
Duplication
 2
 
4
Deletion-Duplication
 15
 
4
Deletion
 1
 
4
Deletion
 1
 
4
Deletion-Duplication
 17
 

No Animal Model Data Available

 

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